RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 NPYP01303 97 aa10.66□□□□□ -0.7
POLR2J3-204ENST00000486319 FA2HQ7L5A8 372 aa10.66□□□□□ -0.7
POLR2J3-204ENST00000486319 FAM19A2Q8N3H0 131 aa10.66□□□□□ -0.7
POLR2J3-204ENST00000486319 MAP1LC3AQ9H492 121 aa10.66□□□□□ -0.7
POLR2J3-204ENST00000486319 SPRY2O43597 315 aa10.65□□□□□ -0.7
POLR2J3-204ENST00000486319 SMIM17P0DL12 118 aa10.65□□□□□ -0.7
POLR2J3-204ENST00000486319 C14orf178Q8N769 122 aaPredicted RBP10.65□□□□□ -0.7
POLR2J3-204ENST00000486319 NIT2Q9NQR4 276 aa10.65□□□□□ -0.7
POLR2J3-204ENST00000486319 AP5S1Q9NUS5 200 aa10.65□□□□□ -0.7
POLR2J3-204ENST00000486319 C19orf73Q9NVV2 129 aa10.65□□□□□ -0.7
POLR2J3-204ENST00000486319 TNFRSF6BO95407 300 aa10.64□□□□□ -0.71
POLR2J3-204ENST00000486319 IFI27P40305 119 aaPredicted RBP10.64□□□□□ -0.71
POLR2J3-204ENST00000486319 Q6ZWC4 215 aa10.64□□□□□ -0.71
POLR2J3-204ENST00000486319 LINC01587Q99440 93 aa10.64□□□□□ -0.71
POLR2J3-204ENST00000486319 LOC389332A0A1B0GUA5 103 aa10.63□□□□□ -0.71
POLR2J3-204ENST00000486319 GSN-AS1Q9NRJ2 163 aa10.63□□□□□ -0.71
POLR2J3-204ENST00000486319 IGHV1-24A0A0C4DH33 117 aa10.63□□□□□ -0.71
POLR2J3-204ENST00000486319 HTN1P15515 57 aa10.63□□□□□ -0.71
POLR2J3-204ENST00000486319 ZNF415Q09FC8 603 aa10.63□□□□□ -0.71
POLR2J3-204ENST00000486319 MORN3Q6PF18 240 aaPredicted RBP10.63□□□□□ -0.71
POLR2J3-204ENST00000486319 POM121L12Q8N7R1 296 aa10.63□□□□□ -0.71
POLR2J3-204ENST00000486319 XCL2Q9UBD3 114 aa10.63□□□□□ -0.71
POLR2J3-204ENST00000486319 KIF25-AS1Q9Y6Z4 181 aa10.63□□□□□ -0.71
POLR2J3-204ENST00000486319 PRSS47A8MTI9 375 aa10.62□□□□□ -0.71
POLR2J3-204ENST00000486319 PPP1R17O96001 155 aa10.62□□□□□ -0.71
POLR2J3-204ENST00000486319 GTSCR1Q86UQ5 136 aa10.62□□□□□ -0.71
POLR2J3-204ENST00000486319 DEFB125Q8N687 156 aa10.62□□□□□ -0.71
POLR2J3-204ENST00000486319 TMEM208Q9BTX3 173 aa10.62□□□□□ -0.71
POLR2J3-204ENST00000486319 C1QTNF4Q9BXJ3 329 aa10.62□□□□□ -0.71
POLR2J3-204ENST00000486319 NXT2Q9NPJ8 142 aaKnown RBP10.62□□□□□ -0.71
POLR2J3-204ENST00000486319 GAS8-AS1O95177 125 aa10.61□□□□□ -0.71
POLR2J3-204ENST00000486319 SCGB1D1O95968 90 aa10.61□□□□□ -0.71
POLR2J3-204ENST00000486319 MGPP08493 103 aa10.61□□□□□ -0.71
POLR2J3-204ENST00000486319 PIK3CD-AS1Q5SR53 167 aa10.61□□□□□ -0.71
POLR2J3-204ENST00000486319 NRACQ8N912 160 aa10.61□□□□□ -0.71
POLR2J3-204ENST00000486319 PTH2Q96A98 100 aa10.61□□□□□ -0.71
POLR2J3-204ENST00000486319 TRAV26-2A0A0B4J265 109 aa10.6□□□□□ -0.71
POLR2J3-204ENST00000486319 LEPROTL1O95214 131 aa10.6□□□□□ -0.71
POLR2J3-204ENST00000486319 GATA1P15976 413 aaPredicted RBP10.6□□□□□ -0.71
POLR2J3-204ENST00000486319 KRTDAPP60985 99 aa10.6□□□□□ -0.71
POLR2J3-204ENST00000486319 ZNF876PQ49A33 203 aa10.6□□□□□ -0.71
POLR2J3-204ENST00000486319 B9D2Q9BPU9 175 aa10.6□□□□□ -0.71
POLR2J3-204ENST00000486319 WFDC10AQ9H1F0 79 aa10.6□□□□□ -0.71
POLR2J3-204ENST00000486319 LINC01546A6NGU7 62 aa10.59□□□□□ -0.71
POLR2J3-204ENST00000486319 M0R2P5 195 aa10.59□□□□□ -0.71
POLR2J3-204ENST00000486319 LINC00315P59091 139 aa10.59□□□□□ -0.71
POLR2J3-204ENST00000486319 PMCHL1Q16048 86 aa10.59□□□□□ -0.71
POLR2J3-204ENST00000486319 C1orf158Q8N1D5 194 aa10.59□□□□□ -0.71
POLR2J3-204ENST00000486319 Q8N8P6 123 aa10.59□□□□□ -0.71
POLR2J3-204ENST00000486319 SPXQ9BT56 116 aa10.59□□□□□ -0.71
POLR2J3-204ENST00000486319 C3orf79P0CE67 100 aa10.58□□□□□ -0.72
POLR2J3-204ENST00000486319 S100A12P80511 92 aa10.58□□□□□ -0.72
POLR2J3-204ENST00000486319 C11orf72Q8NBR9 251 aa10.58□□□□□ -0.72
POLR2J3-204ENST00000486319 C20orf78Q9BR46 151 aa10.58□□□□□ -0.72
POLR2J3-204ENST00000486319 JPT2Q9H910 190 aa10.58□□□□□ -0.72
POLR2J3-204ENST00000486319 HSPB8Q9UJY1 196 aa10.58□□□□□ -0.72
POLR2J3-204ENST00000486319 GOLT1BQ9Y3E0 138 aa10.58□□□□□ -0.72
POLR2J3-204ENST00000486319 A0A087WWL8 130 aa10.58□□□□□ -0.72
POLR2J3-204ENST00000486319 RPL35AP18077 110 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-204ENST00000486319 CDPF1Q6NVV7 123 aa10.58□□□□□ -0.72
POLR2J3-204ENST00000486319 RASL10AQ92737 203 aa10.58□□□□□ -0.72
POLR2J3-204ENST00000486319 F5H697 171 aa10.57□□□□□ -0.72
POLR2J3-204ENST00000486319 CRYGDP07320 174 aa10.57□□□□□ -0.72
POLR2J3-204ENST00000486319 BTF3P20290 206 aaKnown RBP10.57□□□□□ -0.72
POLR2J3-204ENST00000486319 NDUFAF3Q9BU61 184 aa10.57□□□□□ -0.72
POLR2J3-204ENST00000486319 IGLV2-18A0A075B6J9 118 aa10.56□□□□□ -0.72
POLR2J3-204ENST00000486319 IGHV3OR16-12A0A075B7B8 117 aa10.56□□□□□ -0.72
POLR2J3-204ENST00000486319 A8MWV9 139 aa10.56□□□□□ -0.72
POLR2J3-204ENST00000486319 HBDP02042 147 aa10.56□□□□□ -0.72
POLR2J3-204ENST00000486319 GIG44P09565 113 aaPredicted RBP10.56□□□□□ -0.72
POLR2J3-204ENST00000486319 SUMO2P61956 95 aaKnown RBP10.56□□□□□ -0.72
POLR2J3-204ENST00000486319 FAM74A4Q5TZK3 123 aa10.56□□□□□ -0.72
POLR2J3-204ENST00000486319 TMEM70Q9BUB7 260 aa10.56□□□□□ -0.72
POLR2J3-204ENST00000486319 SMIM2Q9BVW6 85 aa10.56□□□□□ -0.72
POLR2J3-204ENST00000486319 K7EMI3 77 aa10.55□□□□□ -0.72
POLR2J3-204ENST00000486319 PRM2P04554 102 aa10.55□□□□□ -0.72
POLR2J3-204ENST00000486319 ZNF56Q15929 161 aa10.55□□□□□ -0.72
POLR2J3-204ENST00000486319 SUMO4Q6EEV6 95 aa10.55□□□□□ -0.72
POLR2J3-204ENST00000486319 TMEM263Q8WUH6 116 aaKnown RBP10.55□□□□□ -0.72
POLR2J3-204ENST00000486319 MAP1LC3CQ9BXW4 147 aa10.55□□□□□ -0.72
POLR2J3-204ENST00000486319 A0A096LNJ9 63 aa10.54□□□□□ -0.72
POLR2J3-204ENST00000486319 NHLRC4P0CG21 123 aaPredicted RBP10.54□□□□□ -0.72
POLR2J3-204ENST00000486319 RPL39LQ96EH5 51 aaKnown RBP10.54□□□□□ -0.72
POLR2J3-204ENST00000486319 NACAE9PAV3 2078 aa10.54□□□□□ -0.72
POLR2J3-204ENST00000486319 IGHV4-30-4P0DP06 118 aa10.53□□□□□ -0.72
POLR2J3-204ENST00000486319 AZU1P20160 251 aa10.53□□□□□ -0.72
POLR2J3-204ENST00000486319 FCER1GP30273 86 aa10.53□□□□□ -0.72
POLR2J3-204ENST00000486319 RPL32P62910 135 aaKnown RBP10.53□□□□□ -0.72
POLR2J3-204ENST00000486319 LAGE3Q14657 143 aa10.53□□□□□ -0.72
POLR2J3-204ENST00000486319 Q8N976 141 aa10.53□□□□□ -0.72
POLR2J3-204ENST00000486319 CSNK1G2-AS1Q8NCQ2 148 aa10.53□□□□□ -0.72
POLR2J3-204ENST00000486319 IL17DQ8TAD2 202 aa10.53□□□□□ -0.72
POLR2J3-204ENST00000486319 RNASE8Q8TDE3 154 aaKnown RBP10.53□□□□□ -0.72
POLR2J3-204ENST00000486319 CSTL1Q9H114 145 aa10.53□□□□□ -0.72
POLR2J3-204ENST00000486319 ST20Q9HBF5 79 aa10.53□□□□□ -0.72
POLR2J3-204ENST00000486319 PCP4L1A6NKN8 68 aa10.53□□□□□ -0.72
POLR2J3-204ENST00000486319 ZNF705AQ6ZN79 300 aaPredicted RBP10.53□□□□□ -0.72
POLR2J3-204ENST00000486319 TEX43Q6ZNM6 134 aa10.53□□□□□ -0.72
POLR2J3-204ENST00000486319 C16orf74Q96GX8 76 aa10.53□□□□□ -0.72
POLR2J3-204ENST00000486319 TRBV6-5A0A0K0K1A5 114 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms