RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 AZU1P20160 251 aa13.78□□□□□ -0.2
SMC4-209ENST00000468653 C11orf72Q8NBR9 251 aa13.78□□□□□ -0.2
SMC4-209ENST00000468653 SPXQ9BT56 116 aa13.78□□□□□ -0.2
SMC4-209ENST00000468653 KIF25-AS1Q9Y6Z4 181 aa13.78□□□□□ -0.2
SMC4-209ENST00000468653 IFI27P40305 119 aaPredicted RBP13.77□□□□□ -0.21
SMC4-209ENST00000468653 FAM74A4Q5TZK3 123 aa13.76□□□□□ -0.21
SMC4-209ENST00000468653 CSNK1G2-AS1Q8NCQ2 148 aa13.76□□□□□ -0.21
SMC4-209ENST00000468653 LINC00315P59091 139 aa13.76□□□□□ -0.21
SMC4-209ENST00000468653 LINC00518Q8N0U6 118 aa13.76□□□□□ -0.21
SMC4-209ENST00000468653 AP5S1Q9NUS5 200 aa13.76□□□□□ -0.21
SMC4-209ENST00000468653 F5H697 171 aa13.75□□□□□ -0.21
SMC4-209ENST00000468653 SMIM6P0DI80 62 aa13.75□□□□□ -0.21
SMC4-209ENST00000468653 OXLD1Q5BKU9 147 aa13.75□□□□□ -0.21
SMC4-209ENST00000468653 POM121L12Q8N7R1 296 aa13.75□□□□□ -0.21
SMC4-209ENST00000468653 NRACQ8N912 160 aa13.75□□□□□ -0.21
SMC4-209ENST00000468653 PTH2Q96A98 100 aa13.75□□□□□ -0.21
SMC4-209ENST00000468653 PMCHL1Q16048 86 aa13.74□□□□□ -0.21
SMC4-209ENST00000468653 TMEM263Q8WUH6 116 aaKnown RBP13.74□□□□□ -0.21
SMC4-209ENST00000468653 STAB1Q9NY15 2570 aa13.74□□□□□ -0.21
SMC4-209ENST00000468653 CRYGDP07320 174 aa13.73□□□□□ -0.21
SMC4-209ENST00000468653 PIK3CD-AS1Q5SR53 167 aa13.73□□□□□ -0.21
SMC4-209ENST00000468653 RNASE8Q8TDE3 154 aaKnown RBP13.73□□□□□ -0.21
SMC4-209ENST00000468653 ZNF56Q15929 161 aa13.73□□□□□ -0.21
SMC4-209ENST00000468653 PYY3Q5JQD4 70 aa13.73□□□□□ -0.21
SMC4-209ENST00000468653 ZNF705AQ6ZN79 300 aaPredicted RBP13.73□□□□□ -0.21
SMC4-209ENST00000468653 RASL10AQ92737 203 aa13.73□□□□□ -0.21
SMC4-209ENST00000468653 C12orf57Q99622 126 aa13.73□□□□□ -0.21
SMC4-209ENST00000468653 NXT2Q9NPJ8 142 aaKnown RBP13.73□□□□□ -0.21
SMC4-209ENST00000468653 IGHV1-24A0A0C4DH33 117 aa13.72□□□□□ -0.21
SMC4-209ENST00000468653 PPP1R17O96001 155 aa13.72□□□□□ -0.21
SMC4-209ENST00000468653 SUMO4Q6EEV6 95 aa13.72□□□□□ -0.21
SMC4-209ENST00000468653 Q6ZWC4 215 aa13.72□□□□□ -0.21
SMC4-209ENST00000468653 MRPL16Q9NX20 251 aaKnown RBP13.72□□□□□ -0.21
SMC4-209ENST00000468653 A8MWV9 139 aa13.71□□□□□ -0.21
SMC4-209ENST00000468653 RRN3P1Q2M238 152 aa13.71□□□□□ -0.21
SMC4-209ENST00000468653 C16orf74Q96GX8 76 aa13.71□□□□□ -0.21
SMC4-209ENST00000468653 IL17DQ8TAD2 202 aa13.71□□□□□ -0.22
SMC4-209ENST00000468653 RPL39LQ96EH5 51 aaKnown RBP13.71□□□□□ -0.22
SMC4-209ENST00000468653 PRSS47A8MTI9 375 aa13.7□□□□□ -0.22
SMC4-209ENST00000468653 APOC4P55056 127 aa13.7□□□□□ -0.22
SMC4-209ENST00000468653 Q8N8P6 123 aa13.7□□□□□ -0.22
SMC4-209ENST00000468653 TRRAPQ9Y4A5 3859 aa13.69□□□□□ -0.22
SMC4-209ENST00000468653 KIR2DL5BA0A0G2JN68 375 aa13.69□□□□□ -0.22
SMC4-209ENST00000468653 KIR2DL5BA0A0G2JPC4 375 aa13.69□□□□□ -0.22
SMC4-209ENST00000468653 JOSD1Q15040 202 aaPredicted RBP13.69□□□□□ -0.22
SMC4-209ENST00000468653 KIR2DL5AQ8N109 375 aa13.69□□□□□ -0.22
SMC4-209ENST00000468653 KIR2DL5BQ8NHK3 375 aa13.69□□□□□ -0.22
SMC4-209ENST00000468653 C20orf78Q9BR46 151 aa13.69□□□□□ -0.22
SMC4-209ENST00000468653 COL6A5A8TX70 2615 aa13.69□□□□□ -0.22
SMC4-209ENST00000468653 TRGV1A0A0A0MS02 117 aa13.68□□□□□ -0.22
SMC4-209ENST00000468653 KRTDAPP60985 99 aa13.68□□□□□ -0.22
SMC4-209ENST00000468653 SUMO2P61956 95 aaKnown RBP13.68□□□□□ -0.22
SMC4-209ENST00000468653 IGHV3-73A0A0B4J1V6 119 aa13.68□□□□□ -0.22
SMC4-209ENST00000468653 NDUFAF3Q9BU61 184 aa13.68□□□□□ -0.22
SMC4-209ENST00000468653 NOP10Q9NPE3 64 aaKnown RBP13.68□□□□□ -0.22
SMC4-209ENST00000468653 ZMAT5Q9UDW3 170 aaKnown RBP13.68□□□□□ -0.22
SMC4-209ENST00000468653 LEPROTL1O95214 131 aa13.67□□□□□ -0.22
SMC4-209ENST00000468653 CFAP126Q5VTH2 177 aa13.67□□□□□ -0.22
SMC4-209ENST00000468653 SMIM2Q9BVW6 85 aa13.67□□□□□ -0.22
SMC4-209ENST00000468653 IGLV2-18A0A075B6J9 118 aa13.66□□□□□ -0.22
SMC4-209ENST00000468653 LINC01546A6NGU7 62 aa13.66□□□□□ -0.22
SMC4-209ENST00000468653 SCGB1D1O95968 90 aa13.66□□□□□ -0.22
SMC4-209ENST00000468653 IGHV4-30-4P0DP06 118 aa13.66□□□□□ -0.22
SMC4-209ENST00000468653 KRTAP10-11P60412 298 aa13.66□□□□□ -0.22
SMC4-209ENST00000468653 DAZ2Q13117 558 aaKnown RBP13.66□□□□□ -0.22
SMC4-209ENST00000468653 ST20Q9HBF5 79 aa13.66□□□□□ -0.22
SMC4-209ENST00000468653 M0QY20 66 aa13.66□□□□□ -0.22
SMC4-209ENST00000468653 RHODO00212 210 aa13.66□□□□□ -0.22
SMC4-209ENST00000468653 RS1O15537 224 aa13.66□□□□□ -0.22
SMC4-209ENST00000468653 EGFEM1PQ0D2K5 195 aa13.66□□□□□ -0.22
SMC4-209ENST00000468653 LGALS9BQ3B8N2 356 aa13.65□□□□□ -0.22
SMC4-209ENST00000468653 UFSP1Q6NVU6 142 aa13.65□□□□□ -0.22
SMC4-209ENST00000468653 NIT2Q9NQR4 276 aa13.65□□□□□ -0.22
SMC4-209ENST00000468653 PLAC8L1A1L4L8 177 aa13.64□□□□□ -0.23
SMC4-209ENST00000468653 H7C1H1 209 aa13.64□□□□□ -0.23
SMC4-209ENST00000468653 Q6ZTI0 123 aa13.64□□□□□ -0.23
SMC4-209ENST00000468653 HSPB8Q9UJY1 196 aa13.64□□□□□ -0.23
SMC4-209ENST00000468653 TCAPO15273 167 aa13.63□□□□□ -0.23
SMC4-209ENST00000468653 HBDP02042 147 aa13.63□□□□□ -0.23
SMC4-209ENST00000468653 C3orf79P0CE67 100 aa13.63□□□□□ -0.23
SMC4-209ENST00000468653 A0A096LNJ9 63 aa13.63□□□□□ -0.23
SMC4-209ENST00000468653 SMIM9A6NGZ8 99 aa13.63□□□□□ -0.23
SMC4-209ENST00000468653 LAGE3Q14657 143 aa13.63□□□□□ -0.23
SMC4-209ENST00000468653 DEFB135Q30KP9 77 aa13.63□□□□□ -0.23
SMC4-209ENST00000468653 OR4C5Q8NGB2 326 aa13.63□□□□□ -0.23
SMC4-209ENST00000468653 FCER1GP30273 86 aa13.62□□□□□ -0.23
SMC4-209ENST00000468653 CDPF1Q6NVV7 123 aa13.62□□□□□ -0.23
SMC4-209ENST00000468653 LINC00173Q6ZV60 143 aa13.62□□□□□ -0.23
SMC4-209ENST00000468653 OVOL2Q9BRP0 275 aa13.62□□□□□ -0.23
SMC4-209ENST00000468653 TRBV6-5A0A0K0K1A5 114 aa13.61□□□□□ -0.23
SMC4-209ENST00000468653 G3V4G9 280 aa13.61□□□□□ -0.23
SMC4-209ENST00000468653 BTF3P20290 206 aaKnown RBP13.61□□□□□ -0.23
SMC4-209ENST00000468653 EMP1P54849 157 aa13.61□□□□□ -0.23
SMC4-209ENST00000468653 ZFP2Q6ZN57 461 aa13.61□□□□□ -0.23
SMC4-209ENST00000468653 TMEM70Q9BUB7 260 aa13.61□□□□□ -0.23
SMC4-209ENST00000468653 X6R8D5 127 aa13.61□□□□□ -0.23
SMC4-209ENST00000468653 RPL32P62910 135 aaKnown RBP13.6□□□□□ -0.23
SMC4-209ENST00000468653 EDA2RQ9HAV5 297 aa13.6□□□□□ -0.23
SMC4-209ENST00000468653 GAGE12BA1L429 117 aa13.6□□□□□ -0.23
SMC4-209ENST00000468653 SDHAF1A6NFY7 115 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms