RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 LENEPQ9Y5L5 61 aa13.55□□□□□ -0.24
APP-203ENST00000354192 NBEAL2Q6ZNJ1 2754 aa13.54□□□□□ -0.24
APP-203ENST00000354192 UNC79Q9P2D8 2635 aa13.54□□□□□ -0.24
APP-203ENST00000354192 SETXQ7Z333 2677 aaKnown RBP13.54□□□□□ -0.24
APP-203ENST00000354192 IGLV2-18A0A075B6J9 118 aa13.54□□□□□ -0.24
APP-203ENST00000354192 SFTA2Q6UW10 78 aa13.54□□□□□ -0.24
APP-203ENST00000354192 PSMG3-AS1Q96PY0 264 aa13.54□□□□□ -0.24
APP-203ENST00000354192 A0A096LNT2 108 aa13.53□□□□□ -0.24
APP-203ENST00000354192 CDKN1BP46527 198 aa13.53□□□□□ -0.24
APP-203ENST00000354192 OPRPNQ99935 248 aaPredicted RBP13.53□□□□□ -0.24
APP-203ENST00000354192 IGHV3-64A0A075B6Q5 118 aa13.53□□□□□ -0.24
APP-203ENST00000354192 A0A0J9YX75 114 aa13.53□□□□□ -0.24
APP-203ENST00000354192 FGF6P10767 208 aa13.53□□□□□ -0.24
APP-203ENST00000354192 SUMO4Q6EEV6 95 aa13.53□□□□□ -0.24
APP-203ENST00000354192 TMEM61Q8N0U2 210 aa13.53□□□□□ -0.24
APP-203ENST00000354192 TP53TG1Q9Y2A0 90 aa13.53□□□□□ -0.24
APP-203ENST00000354192 P0DMU3 169 aa13.53□□□□□ -0.24
APP-203ENST00000354192 FAM231AP0DMU4 169 aa13.53□□□□□ -0.24
APP-203ENST00000354192 FAM231CP0DMU5 169 aa13.53□□□□□ -0.24
APP-203ENST00000354192 UBE2V1Q13404 147 aa13.53□□□□□ -0.24
APP-203ENST00000354192 CHTOPQ9Y3Y2 248 aaKnown RBP13.53□□□□□ -0.24
APP-203ENST00000354192 ORAOV1Q8WV07 137 aa13.52□□□□□ -0.24
APP-203ENST00000354192 MRAP2Q96G30 205 aa13.52□□□□□ -0.24
APP-203ENST00000354192 SDHAF1A6NFY7 115 aa13.52□□□□□ -0.25
APP-203ENST00000354192 CR1P17927 2039 aa13.52□□□□□ -0.25
APP-203ENST00000354192 UBE2E2Q96LR5 201 aa13.52□□□□□ -0.25
APP-203ENST00000354192 ATP6V0BQ99437 205 aa13.52□□□□□ -0.25
APP-203ENST00000354192 NHP2Q9NX24 153 aaKnown RBP13.52□□□□□ -0.25
APP-203ENST00000354192 PROK1P58294 105 aa13.51□□□□□ -0.25
APP-203ENST00000354192 BOD1L2Q8IYS8 172 aa13.51□□□□□ -0.25
APP-203ENST00000354192 DEFB125Q8N687 156 aa13.51□□□□□ -0.25
APP-203ENST00000354192 DLX4Q92988 240 aaPredicted RBP13.51□□□□□ -0.25
APP-203ENST00000354192 J3QLI3 93 aa13.51□□□□□ -0.25
APP-203ENST00000354192 K7EMT4 169 aa13.51□□□□□ -0.25
APP-203ENST00000354192 MAPKAPK5-AS1Q8N8E1 139 aa13.51□□□□□ -0.25
APP-203ENST00000354192 HHLA3Q9XRX5 114 aa13.51□□□□□ -0.25
APP-203ENST00000354192 IGHV3-16A0A0C4DH30 117 aa13.51□□□□□ -0.25
APP-203ENST00000354192 K7EQG2 157 aa13.51□□□□□ -0.25
APP-203ENST00000354192 KIR2DL4Q99706 377 aa13.5□□□□□ -0.25
APP-203ENST00000354192 ORMDL2Q53FV1 153 aa13.5□□□□□ -0.25
APP-203ENST00000354192 XCL2Q9UBD3 114 aa13.5□□□□□ -0.25
APP-203ENST00000354192 IGHV1OR15-1A0A075B7D0 117 aa13.49□□□□□ -0.25
APP-203ENST00000354192 KLLNB2CW77 178 aa13.49□□□□□ -0.25
APP-203ENST00000354192 ELANEP08246 267 aa13.49□□□□□ -0.25
APP-203ENST00000354192 FXYD2P54710 66 aa13.49□□□□□ -0.25
APP-203ENST00000354192 RNASE13Q5GAN3 156 aaKnown RBP13.49□□□□□ -0.25
APP-203ENST00000354192 TMEM170BQ5T4T1 132 aa13.49□□□□□ -0.25
APP-203ENST00000354192 SCGB1D4Q6XE38 83 aa13.49□□□□□ -0.25
APP-203ENST00000354192 CHAC1Q9BUX1 264 aa13.49□□□□□ -0.25
APP-203ENST00000354192 YAE1D1Q9NRH1 226 aa13.49□□□□□ -0.25
APP-203ENST00000354192 TRBV25-1A0A075B6N4 114 aa13.48□□□□□ -0.25
APP-203ENST00000354192 PRSS29PA6NIE9 313 aa13.48□□□□□ -0.25
APP-203ENST00000354192 C21orf62-AS1Q17RA5 79 aa13.48□□□□□ -0.25
APP-203ENST00000354192 OR1N2Q8NGR9 330 aa13.48□□□□□ -0.25
APP-203ENST00000354192 HIST1H4GQ99525 98 aa13.48□□□□□ -0.25
APP-203ENST00000354192 A6NDN8 102 aa13.48□□□□□ -0.25
APP-203ENST00000354192 GAGE10A6NGK3 116 aa13.48□□□□□ -0.25
APP-203ENST00000354192 LINC01587Q99440 93 aa13.48□□□□□ -0.25
APP-203ENST00000354192 CYSLTR1Q9Y271 337 aa13.48□□□□□ -0.25
APP-203ENST00000354192 GAGE1Q13065 139 aa13.47□□□□□ -0.25
APP-203ENST00000354192 ADAMTSL5Q6ZMM2 481 aa13.47□□□□□ -0.25
APP-203ENST00000354192 A0A087WX48 190 aa13.47□□□□□ -0.25
APP-203ENST00000354192 OR11H12B2RN74 326 aa13.47□□□□□ -0.25
APP-203ENST00000354192 OR11H2Q8NH07 326 aa13.47□□□□□ -0.25
APP-203ENST00000354192 LINC01619G3V211 115 aa13.46□□□□□ -0.25
APP-203ENST00000354192 IGHV4-4A0A075B6R2 117 aa13.46□□□□□ -0.26
APP-203ENST00000354192 IGHV3-38A0A0C4DH36 116 aa13.46□□□□□ -0.26
APP-203ENST00000354192 HSD52Q0P140 79 aa13.46□□□□□ -0.26
APP-203ENST00000354192 RNASE8Q8TDE3 154 aaKnown RBP13.46□□□□□ -0.26
APP-203ENST00000354192 H7C1H1 209 aa13.45□□□□□ -0.26
APP-203ENST00000354192 SYT8Q8NBV8 401 aa13.45□□□□□ -0.26
APP-203ENST00000354192 Q9UF83 564 aa13.45□□□□□ -0.26
APP-203ENST00000354192 MTURNQ8N3F0 131 aa13.45□□□□□ -0.26
APP-203ENST00000354192 BAALCQ8WXS3 180 aa13.45□□□□□ -0.26
APP-203ENST00000354192 F8VRH5 84 aa13.44□□□□□ -0.26
APP-203ENST00000354192 RBMY1A1P0DJD3 496 aaKnown RBP13.44□□□□□ -0.26
APP-203ENST00000354192 RBMY1CP0DJD4 496 aa13.44□□□□□ -0.26
APP-203ENST00000354192 RBMY1FQ15415 496 aaKnown RBP13.44□□□□□ -0.26
APP-203ENST00000354192 OR9G4Q8NGQ1 327 aa13.44□□□□□ -0.26
APP-203ENST00000354192 PHLDA1Q8WV24 401 aaPredicted RBP13.44□□□□□ -0.26
APP-203ENST00000354192 FAM19A4Q96LR4 140 aa13.44□□□□□ -0.26
APP-203ENST00000354192 IGHV3-53P01767 116 aa13.43□□□□□ -0.26
APP-203ENST00000354192 CEMP1Q6PRD7 247 aaPredicted RBP13.43□□□□□ -0.26
APP-203ENST00000354192 ZFP2Q6ZN57 461 aa13.43□□□□□ -0.26
APP-203ENST00000354192 SRSF9Q13242 221 aaKnown RBP eCLIP13.42□□□□□ -0.26
APP-203ENST00000354192 Q6ZSV7 163 aa13.42□□□□□ -0.26
APP-203ENST00000354192 SMR3AQ99954 134 aa13.42□□□□□ -0.26
APP-203ENST00000354192 C20orf78Q9BR46 151 aa13.42□□□□□ -0.26
APP-203ENST00000354192 MRPL16Q9NX20 251 aaKnown RBP13.42□□□□□ -0.26
APP-203ENST00000354192 ATRQ13535 2644 aa13.42□□□□□ -0.26
APP-203ENST00000354192 PRADC1Q9BSG0 188 aa13.42□□□□□ -0.26
APP-203ENST00000354192 DNAJC9-AS1A6NH13 148 aa13.41□□□□□ -0.26
APP-203ENST00000354192 ZNF815PA8K554 130 aa13.41□□□□□ -0.26
APP-203ENST00000354192 SEC11AP67812 179 aa13.41□□□□□ -0.26
APP-203ENST00000354192 TOMM6Q96B49 74 aa13.41□□□□□ -0.26
APP-203ENST00000354192 VCYO14598 125 aa13.41□□□□□ -0.26
APP-203ENST00000354192 LINC00315P59091 139 aa13.41□□□□□ -0.26
APP-203ENST00000354192 NSUN5P1Q3KNT7 163 aa13.41□□□□□ -0.26
APP-203ENST00000354192 CD28P10747 220 aa13.4□□□□□ -0.26
APP-203ENST00000354192 HLA-DRB4P13762 266 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms