RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PCP4L1A6NKN8 68 aa8.7□□□□□ -1.02
TRIM40-205ENST00000307859 GATA1P15976 413 aaPredicted RBP8.7□□□□□ -1.02
TRIM40-205ENST00000307859 STHQ8IWL8 128 aa8.7□□□□□ -1.02
TRIM40-205ENST00000307859 C14orf178Q8N769 122 aaPredicted RBP8.7□□□□□ -1.02
TRIM40-205ENST00000307859 CITED1Q99966 193 aa8.7□□□□□ -1.02
TRIM40-205ENST00000307859 INSP01308 110 aa8.69□□□□□ -1.02
TRIM40-205ENST00000307859 LINC00315P59091 139 aa8.69□□□□□ -1.02
TRIM40-205ENST00000307859 NXT2Q9NPJ8 142 aaKnown RBP8.69□□□□□ -1.02
TRIM40-205ENST00000307859 C19orf73Q9NVV2 129 aa8.69□□□□□ -1.02
TRIM40-205ENST00000307859 A0A096LNJ9 63 aa8.69□□□□□ -1.02
TRIM40-205ENST00000307859 TRAV26-2A0A0B4J265 109 aa8.69□□□□□ -1.02
TRIM40-205ENST00000307859 CBY3A6NI87 242 aa8.69□□□□□ -1.02
TRIM40-205ENST00000307859 LEPROTL1O95214 131 aa8.69□□□□□ -1.02
TRIM40-205ENST00000307859 TEX43Q6ZNM6 134 aa8.69□□□□□ -1.02
TRIM40-205ENST00000307859 SYT8Q8NBV8 401 aa8.69□□□□□ -1.02
TRIM40-205ENST00000307859 IGLV2-18A0A075B6J9 118 aa8.68□□□□□ -1.02
TRIM40-205ENST00000307859 BTF3P20290 206 aaKnown RBP8.68□□□□□ -1.02
TRIM40-205ENST00000307859 Q8N8P6 123 aa8.68□□□□□ -1.02
TRIM40-205ENST00000307859 LINC00173Q6ZV60 143 aa8.67□□□□□ -1.02
TRIM40-205ENST00000307859 HSPB8Q9UJY1 196 aa8.67□□□□□ -1.02
TRIM40-205ENST00000307859 NBEAL2Q6ZNJ1 2754 aa8.66□□□□□ -1.02
TRIM40-205ENST00000307859 HBDP02042 147 aa8.66□□□□□ -1.02
TRIM40-205ENST00000307859 MGPP08493 103 aa8.66□□□□□ -1.02
TRIM40-205ENST00000307859 SMIM17P0DL12 118 aa8.66□□□□□ -1.02
TRIM40-205ENST00000307859 INSL3P51460 131 aa8.66□□□□□ -1.02
TRIM40-205ENST00000307859 PKIAP61925 76 aa8.66□□□□□ -1.02
TRIM40-205ENST00000307859 ZNF415Q09FC8 603 aa8.66□□□□□ -1.02
TRIM40-205ENST00000307859 ZNF664Q8N3J9 261 aa8.66□□□□□ -1.02
TRIM40-205ENST00000307859 RASL10AQ92737 203 aa8.66□□□□□ -1.02
TRIM40-205ENST00000307859 PTH2Q96A98 100 aa8.66□□□□□ -1.02
TRIM40-205ENST00000307859 TMEM70Q9BUB7 260 aa8.66□□□□□ -1.02
TRIM40-205ENST00000307859 JPT2Q9H910 190 aa8.66□□□□□ -1.02
TRIM40-205ENST00000307859 TRRAPQ9Y4A5 3859 aa8.66□□□□□ -1.02
TRIM40-205ENST00000307859 PRKDCP78527 4128 aaKnown RBP8.66□□□□□ -1.02
TRIM40-205ENST00000307859 PPP1R17O96001 155 aa8.65□□□□□ -1.02
TRIM40-205ENST00000307859 NUTF2P61970 127 aaKnown RBP8.65□□□□□ -1.02
TRIM40-205ENST00000307859 PIK3CD-AS1Q5SR53 167 aa8.65□□□□□ -1.02
TRIM40-205ENST00000307859 C20orf78Q9BR46 151 aa8.65□□□□□ -1.02
TRIM40-205ENST00000307859 XCL2Q9UBD3 114 aa8.65□□□□□ -1.02
TRIM40-205ENST00000307859 SYS1-DBNDD2H3BUS1 97 aa8.65□□□□□ -1.03
TRIM40-205ENST00000307859 CRYGDP07320 174 aa8.65□□□□□ -1.03
TRIM40-205ENST00000307859 C1orf158Q8N1D5 194 aa8.65□□□□□ -1.03
TRIM40-205ENST00000307859 C11orf72Q8NBR9 251 aa8.65□□□□□ -1.03
TRIM40-205ENST00000307859 LINC01587Q99440 93 aa8.65□□□□□ -1.03
TRIM40-205ENST00000307859 SMIM2Q9BVW6 85 aa8.65□□□□□ -1.03
TRIM40-205ENST00000307859 WFDC10AQ9H1F0 79 aa8.65□□□□□ -1.03
TRIM40-205ENST00000307859 A0A087WWL8 130 aa8.64□□□□□ -1.03
TRIM40-205ENST00000307859 KIR2DL5BA0A0G2JN68 375 aa8.64□□□□□ -1.03
TRIM40-205ENST00000307859 KIR2DL5BA0A0G2JPC4 375 aa8.64□□□□□ -1.03
TRIM40-205ENST00000307859 TSTD3H0UI37 97 aa8.64□□□□□ -1.03
TRIM40-205ENST00000307859 M0R2P5 195 aa8.64□□□□□ -1.03
TRIM40-205ENST00000307859 SUMO2P61956 95 aaKnown RBP8.64□□□□□ -1.03
TRIM40-205ENST00000307859 ZNF876PQ49A33 203 aa8.64□□□□□ -1.03
TRIM40-205ENST00000307859 C9orf66Q5T8R8 295 aa8.64□□□□□ -1.03
TRIM40-205ENST00000307859 SUMO4Q6EEV6 95 aa8.64□□□□□ -1.03
TRIM40-205ENST00000307859 SPATA12Q7Z6I5 190 aa8.64□□□□□ -1.03
TRIM40-205ENST00000307859 KIR2DL5AQ8N109 375 aa8.64□□□□□ -1.03
TRIM40-205ENST00000307859 RPL39LQ96EH5 51 aaKnown RBP8.64□□□□□ -1.03
TRIM40-205ENST00000307859 MAP1LC3CQ9BXW4 147 aa8.64□□□□□ -1.03
TRIM40-205ENST00000307859 GIG44P09565 113 aaPredicted RBP8.63□□□□□ -1.03
TRIM40-205ENST00000307859 HTN1P15515 57 aa8.63□□□□□ -1.03
TRIM40-205ENST00000307859 FCER1GP30273 86 aa8.63□□□□□ -1.03
TRIM40-205ENST00000307859 PET117Q6UWS5 81 aa8.63□□□□□ -1.03
TRIM40-205ENST00000307859 PRO1933Q9H354 126 aa8.63□□□□□ -1.03
TRIM40-205ENST00000307859 K7EMI3 77 aa8.62□□□□□ -1.03
TRIM40-205ENST00000307859 PRM2P04554 102 aa8.62□□□□□ -1.03
TRIM40-205ENST00000307859 RPL32P62910 135 aaKnown RBP8.62□□□□□ -1.03
TRIM40-205ENST00000307859 MORN3Q6PF18 240 aaPredicted RBP8.62□□□□□ -1.03
TRIM40-205ENST00000307859 SPXQ9BT56 116 aa8.62□□□□□ -1.03
TRIM40-205ENST00000307859 VAMP8Q9BV40 100 aa8.62□□□□□ -1.03
TRIM40-205ENST00000307859 LAGE3Q14657 143 aa8.62□□□□□ -1.03
TRIM40-205ENST00000307859 IL17DQ8TAD2 202 aa8.62□□□□□ -1.03
TRIM40-205ENST00000307859 TMEM208Q9BTX3 173 aa8.62□□□□□ -1.03
TRIM40-205ENST00000307859 KMT2CQ8NEZ4 4911 aaKnown RBP8.61□□□□□ -1.03
TRIM40-205ENST00000307859 TRBV6-5A0A0K0K1A5 114 aa8.61□□□□□ -1.03
TRIM40-205ENST00000307859 C20orf202A1L168 122 aa8.61□□□□□ -1.03
TRIM40-205ENST00000307859 LINC00587B1AMM8 73 aa8.61□□□□□ -1.03
TRIM40-205ENST00000307859 FAM74A4Q5TZK3 123 aa8.61□□□□□ -1.03
TRIM40-205ENST00000307859 LINC01545Q5VT33 79 aa8.61□□□□□ -1.03
TRIM40-205ENST00000307859 NDUFAF3Q9BU61 184 aa8.61□□□□□ -1.03
TRIM40-205ENST00000307859 C1QTNF4Q9BXJ3 329 aa8.61□□□□□ -1.03
TRIM40-205ENST00000307859 EDA2RQ9HAV5 297 aa8.61□□□□□ -1.03
TRIM40-205ENST00000307859 A8MWV9 139 aa8.6□□□□□ -1.03
TRIM40-205ENST00000307859 F5H697 171 aa8.6□□□□□ -1.03
TRIM40-205ENST00000307859 M0QY20 66 aa8.6□□□□□ -1.03
TRIM40-205ENST00000307859 TCAPO15273 167 aa8.6□□□□□ -1.03
TRIM40-205ENST00000307859 AZU1P20160 251 aa8.6□□□□□ -1.03
TRIM40-205ENST00000307859 ZNF56Q15929 161 aa8.6□□□□□ -1.03
TRIM40-205ENST00000307859 UFSP1Q6NVU6 142 aa8.6□□□□□ -1.03
TRIM40-205ENST00000307859 CSNK1G2-AS1Q8NCQ2 148 aa8.6□□□□□ -1.03
TRIM40-205ENST00000307859 RNASE8Q8TDE3 154 aaKnown RBP8.6□□□□□ -1.03
TRIM40-205ENST00000307859 IFI27L1Q96BM0 104 aa8.6□□□□□ -1.03
TRIM40-205ENST00000307859 MCRIP2Q9BUT9 160 aaKnown RBP8.6□□□□□ -1.03
TRIM40-205ENST00000307859 ST20Q9HBF5 79 aa8.6□□□□□ -1.03
TRIM40-205ENST00000307859 GOLT1BQ9Y3E0 138 aa8.6□□□□□ -1.03
TRIM40-205ENST00000307859 VWFP04275 2813 aa8.6□□□□□ -1.03
TRIM40-205ENST00000307859 RPL35AP18077 110 aaKnown RBP8.59□□□□□ -1.03
TRIM40-205ENST00000307859 POLR2KP53803 58 aaKnown RBP8.59□□□□□ -1.03
TRIM40-205ENST00000307859 GTSCR1Q86UQ5 136 aa8.59□□□□□ -1.03
TRIM40-205ENST00000307859 WFDC9Q8NEX5 89 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms