RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 TMEM158Q8WZ71 300 aa16.6■□□□□ 0.25
PTX3-201ENST00000295927 WIPF1O43516 503 aa16.6■□□□□ 0.25
PTX3-201ENST00000295927 Q6ZWC4 215 aa16.6■□□□□ 0.25
PTX3-201ENST00000295927 FA2HQ7L5A8 372 aa16.6■□□□□ 0.25
PTX3-201ENST00000295927 C1QTNF4Q9BXJ3 329 aa16.6■□□□□ 0.25
PTX3-201ENST00000295927 MAP1LC3AQ9H492 121 aa16.6■□□□□ 0.25
PTX3-201ENST00000295927 A0A087WWL8 130 aa16.59■□□□□ 0.25
PTX3-201ENST00000295927 AZU1P20160 251 aa16.59■□□□□ 0.25
PTX3-201ENST00000295927 PMCHL1Q16048 86 aa16.59■□□□□ 0.25
PTX3-201ENST00000295927 POM121L12Q8N7R1 296 aa16.59■□□□□ 0.25
PTX3-201ENST00000295927 AP5S1Q9NUS5 200 aa16.58■□□□□ 0.25
PTX3-201ENST00000295927 IGHV1-24A0A0C4DH33 117 aa16.58■□□□□ 0.24
PTX3-201ENST00000295927 GOLT1BQ9Y3E0 138 aa16.58■□□□□ 0.24
PTX3-201ENST00000295927 M0R2P5 195 aa16.57■□□□□ 0.24
PTX3-201ENST00000295927 CSNK1G2-AS1Q8NCQ2 148 aa16.57■□□□□ 0.24
PTX3-201ENST00000295927 JOSD1Q15040 202 aaPredicted RBP16.57■□□□□ 0.24
PTX3-201ENST00000295927 CRYGDP07320 174 aa16.56■□□□□ 0.24
PTX3-201ENST00000295927 FAM74A4Q5TZK3 123 aa16.56■□□□□ 0.24
PTX3-201ENST00000295927 RASL10AQ92737 203 aa16.56■□□□□ 0.24
PTX3-201ENST00000295927 SPXQ9BT56 116 aa16.56■□□□□ 0.24
PTX3-201ENST00000295927 STAB1Q9NY15 2570 aa16.56■□□□□ 0.24
PTX3-201ENST00000295927 PTH2Q96A98 100 aa16.55■□□□□ 0.24
PTX3-201ENST00000295927 CSTL1Q9H114 145 aa16.55■□□□□ 0.24
PTX3-201ENST00000295927 RNASE8Q8TDE3 154 aaKnown RBP16.54■□□□□ 0.24
PTX3-201ENST00000295927 PRSS47A8MTI9 375 aa16.53■□□□□ 0.24
PTX3-201ENST00000295927 PIK3CD-AS1Q5SR53 167 aa16.53■□□□□ 0.24
PTX3-201ENST00000295927 SUMO4Q6EEV6 95 aa16.53■□□□□ 0.24
PTX3-201ENST00000295927 CDPF1Q6NVV7 123 aa16.53■□□□□ 0.24
PTX3-201ENST00000295927 RPL39LQ96EH5 51 aaKnown RBP16.53■□□□□ 0.24
PTX3-201ENST00000295927 F5H697 171 aa16.53■□□□□ 0.24
PTX3-201ENST00000295927 NXT2Q9NPJ8 142 aaKnown RBP16.53■□□□□ 0.24
PTX3-201ENST00000295927 IL17DQ8TAD2 202 aa16.52■□□□□ 0.23
PTX3-201ENST00000295927 TMEM263Q8WUH6 116 aaKnown RBP16.52■□□□□ 0.23
PTX3-201ENST00000295927 IGLV2-18A0A075B6J9 118 aa16.51■□□□□ 0.23
PTX3-201ENST00000295927 ZNF705AQ6ZN79 300 aaPredicted RBP16.51■□□□□ 0.23
PTX3-201ENST00000295927 Q8N8P6 123 aa16.51■□□□□ 0.23
PTX3-201ENST00000295927 NIT2Q9NQR4 276 aa16.51■□□□□ 0.23
PTX3-201ENST00000295927 MRPL16Q9NX20 251 aaKnown RBP16.51■□□□□ 0.23
PTX3-201ENST00000295927 LINC01546A6NGU7 62 aa16.51■□□□□ 0.23
PTX3-201ENST00000295927 KRTDAPP60985 99 aa16.51■□□□□ 0.23
PTX3-201ENST00000295927 ZNF56Q15929 161 aa16.51■□□□□ 0.23
PTX3-201ENST00000295927 OXLD1Q5BKU9 147 aa16.5■□□□□ 0.23
PTX3-201ENST00000295927 A8MWV9 139 aa16.49■□□□□ 0.23
PTX3-201ENST00000295927 SUMO2P61956 95 aaKnown RBP16.49■□□□□ 0.23
PTX3-201ENST00000295927 C20orf78Q9BR46 151 aa16.49■□□□□ 0.23
PTX3-201ENST00000295927 NACAE9PAV3 2078 aa16.49■□□□□ 0.23
PTX3-201ENST00000295927 LEPROTL1O95214 131 aa16.49■□□□□ 0.23
PTX3-201ENST00000295927 SCGB1D1O95968 90 aa16.49■□□□□ 0.23
PTX3-201ENST00000295927 PPP1R17O96001 155 aa16.49■□□□□ 0.23
PTX3-201ENST00000295927 C3orf79P0CE67 100 aa16.49■□□□□ 0.23
PTX3-201ENST00000295927 A0A096LNJ9 63 aa16.48■□□□□ 0.23
PTX3-201ENST00000295927 SMIM2Q9BVW6 85 aa16.48■□□□□ 0.23
PTX3-201ENST00000295927 LINC00173Q6ZV60 143 aa16.47■□□□□ 0.23
PTX3-201ENST00000295927 C16orf74Q96GX8 76 aa16.47■□□□□ 0.23
PTX3-201ENST00000295927 M0QY20 66 aa16.46■□□□□ 0.23
PTX3-201ENST00000295927 RRN3P1Q2M238 152 aa16.46■□□□□ 0.23
PTX3-201ENST00000295927 CFAP126Q5VTH2 177 aa16.46■□□□□ 0.23
PTX3-201ENST00000295927 UFSP1Q6NVU6 142 aa16.46■□□□□ 0.23
PTX3-201ENST00000295927 COL6A5A8TX70 2615 aa16.46■□□□□ 0.23
PTX3-201ENST00000295927 IGHV3-73A0A0B4J1V6 119 aa16.45■□□□□ 0.22
PTX3-201ENST00000295927 PLAC8L1A1L4L8 177 aa16.45■□□□□ 0.22
PTX3-201ENST00000295927 NDUFAF3Q9BU61 184 aa16.45■□□□□ 0.22
PTX3-201ENST00000295927 TRGV1A0A0A0MS02 117 aa16.44■□□□□ 0.22
PTX3-201ENST00000295927 HBDP02042 147 aa16.44■□□□□ 0.22
PTX3-201ENST00000295927 KIR2DL5BA0A0G2JN68 375 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 KIR2DL5BA0A0G2JPC4 375 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 TCAPO15273 167 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 RS1O15537 224 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 DAZ2Q13117 558 aaKnown RBP16.43■□□□□ 0.22
PTX3-201ENST00000295927 KIR2DL5AQ8N109 375 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 KIR2DL5BQ8NHK3 375 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 ST20Q9HBF5 79 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 NOP10Q9NPE3 64 aaKnown RBP16.43■□□□□ 0.22
PTX3-201ENST00000295927 HSPB8Q9UJY1 196 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 BTF3P20290 206 aaKnown RBP16.43■□□□□ 0.22
PTX3-201ENST00000295927 KRTAP10-11P60412 298 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 Q8N976 141 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 APOC4P55056 127 aa16.42■□□□□ 0.22
PTX3-201ENST00000295927 LAGE3Q14657 143 aa16.42■□□□□ 0.22
PTX3-201ENST00000295927 Q6ZTI0 123 aa16.42■□□□□ 0.22
PTX3-201ENST00000295927 CMYA5Q8N3K9 4069 aa16.42■□□□□ 0.22
PTX3-201ENST00000295927 TRBV6-5A0A0K0K1A5 114 aa16.41■□□□□ 0.22
PTX3-201ENST00000295927 FCER1GP30273 86 aa16.41■□□□□ 0.22
PTX3-201ENST00000295927 LGALS9BQ3B8N2 356 aa16.41■□□□□ 0.22
PTX3-201ENST00000295927 RHODO00212 210 aa16.41■□□□□ 0.22
PTX3-201ENST00000295927 TMEM70Q9BUB7 260 aa16.41■□□□□ 0.22
PTX3-201ENST00000295927 IGHV4-30-4P0DP06 118 aa16.4■□□□□ 0.22
PTX3-201ENST00000295927 POLR2KP53803 58 aaKnown RBP16.4■□□□□ 0.22
PTX3-201ENST00000295927 RPL32P62910 135 aaKnown RBP16.4■□□□□ 0.22
PTX3-201ENST00000295927 EGFEM1PQ0D2K5 195 aa16.4■□□□□ 0.22
PTX3-201ENST00000295927 EDA2RQ9HAV5 297 aa16.4■□□□□ 0.22
PTX3-201ENST00000295927 SDHAF1A6NFY7 115 aa16.39■□□□□ 0.21
PTX3-201ENST00000295927 H7C1H1 209 aa16.39■□□□□ 0.21
PTX3-201ENST00000295927 Q6ZSN1 163 aa16.39■□□□□ 0.21
PTX3-201ENST00000295927 NEGR1Q7Z3B1 354 aa16.39■□□□□ 0.21
PTX3-201ENST00000295927 OVOL2Q9BRP0 275 aa16.39■□□□□ 0.21
PTX3-201ENST00000295927 MAP1LC3CQ9BXW4 147 aa16.39■□□□□ 0.21
PTX3-201ENST00000295927 X6R8D5 127 aa16.39■□□□□ 0.21
PTX3-201ENST00000295927 SYS1-DBNDD2H3BUS1 97 aa16.38■□□□□ 0.21
PTX3-201ENST00000295927 OR4C5Q8NGB2 326 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms