RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 TMEM158Q8WZ71 300 aa16.6■□□□□ 0.25
PTX3-201ENST00000295927 WIPF1O43516 503 aa16.6■□□□□ 0.25
PTX3-201ENST00000295927 Q6ZWC4 215 aa16.6■□□□□ 0.25
PTX3-201ENST00000295927 FA2HQ7L5A8 372 aa16.6■□□□□ 0.25
PTX3-201ENST00000295927 C1QTNF4Q9BXJ3 329 aa16.6■□□□□ 0.25
PTX3-201ENST00000295927 MAP1LC3AQ9H492 121 aa16.6■□□□□ 0.25
PTX3-201ENST00000295927 A0A087WWL8 130 aa16.59■□□□□ 0.25
PTX3-201ENST00000295927 AZU1P20160 251 aa16.59■□□□□ 0.25
PTX3-201ENST00000295927 PMCHL1Q16048 86 aa16.59■□□□□ 0.25
PTX3-201ENST00000295927 POM121L12Q8N7R1 296 aa16.59■□□□□ 0.25
PTX3-201ENST00000295927 AP5S1Q9NUS5 200 aa16.58■□□□□ 0.25
PTX3-201ENST00000295927 IGHV1-24A0A0C4DH33 117 aa16.58■□□□□ 0.24
PTX3-201ENST00000295927 GOLT1BQ9Y3E0 138 aa16.58■□□□□ 0.24
PTX3-201ENST00000295927 M0R2P5 195 aa16.57■□□□□ 0.24
PTX3-201ENST00000295927 CSNK1G2-AS1Q8NCQ2 148 aa16.57■□□□□ 0.24
PTX3-201ENST00000295927 JOSD1Q15040 202 aaPredicted RBP16.57■□□□□ 0.24
PTX3-201ENST00000295927 CRYGDP07320 174 aa16.56■□□□□ 0.24
PTX3-201ENST00000295927 FAM74A4Q5TZK3 123 aa16.56■□□□□ 0.24
PTX3-201ENST00000295927 RASL10AQ92737 203 aa16.56■□□□□ 0.24
PTX3-201ENST00000295927 SPXQ9BT56 116 aa16.56■□□□□ 0.24
PTX3-201ENST00000295927 STAB1Q9NY15 2570 aa16.56■□□□□ 0.24
PTX3-201ENST00000295927 PTH2Q96A98 100 aa16.55■□□□□ 0.24
PTX3-201ENST00000295927 CSTL1Q9H114 145 aa16.55■□□□□ 0.24
PTX3-201ENST00000295927 RNASE8Q8TDE3 154 aaKnown RBP16.54■□□□□ 0.24
PTX3-201ENST00000295927 PRSS47A8MTI9 375 aa16.53■□□□□ 0.24
PTX3-201ENST00000295927 PIK3CD-AS1Q5SR53 167 aa16.53■□□□□ 0.24
PTX3-201ENST00000295927 SUMO4Q6EEV6 95 aa16.53■□□□□ 0.24
PTX3-201ENST00000295927 CDPF1Q6NVV7 123 aa16.53■□□□□ 0.24
PTX3-201ENST00000295927 RPL39LQ96EH5 51 aaKnown RBP16.53■□□□□ 0.24
PTX3-201ENST00000295927 F5H697 171 aa16.53■□□□□ 0.24
PTX3-201ENST00000295927 NXT2Q9NPJ8 142 aaKnown RBP16.53■□□□□ 0.24
PTX3-201ENST00000295927 IL17DQ8TAD2 202 aa16.52■□□□□ 0.23
PTX3-201ENST00000295927 TMEM263Q8WUH6 116 aaKnown RBP16.52■□□□□ 0.23
PTX3-201ENST00000295927 IGLV2-18A0A075B6J9 118 aa16.51■□□□□ 0.23
PTX3-201ENST00000295927 ZNF705AQ6ZN79 300 aaPredicted RBP16.51■□□□□ 0.23
PTX3-201ENST00000295927 Q8N8P6 123 aa16.51■□□□□ 0.23
PTX3-201ENST00000295927 NIT2Q9NQR4 276 aa16.51■□□□□ 0.23
PTX3-201ENST00000295927 MRPL16Q9NX20 251 aaKnown RBP16.51■□□□□ 0.23
PTX3-201ENST00000295927 LINC01546A6NGU7 62 aa16.51■□□□□ 0.23
PTX3-201ENST00000295927 KRTDAPP60985 99 aa16.51■□□□□ 0.23
PTX3-201ENST00000295927 ZNF56Q15929 161 aa16.51■□□□□ 0.23
PTX3-201ENST00000295927 OXLD1Q5BKU9 147 aa16.5■□□□□ 0.23
PTX3-201ENST00000295927 A8MWV9 139 aa16.49■□□□□ 0.23
PTX3-201ENST00000295927 SUMO2P61956 95 aaKnown RBP16.49■□□□□ 0.23
PTX3-201ENST00000295927 C20orf78Q9BR46 151 aa16.49■□□□□ 0.23
PTX3-201ENST00000295927 NACAE9PAV3 2078 aa16.49■□□□□ 0.23
PTX3-201ENST00000295927 LEPROTL1O95214 131 aa16.49■□□□□ 0.23
PTX3-201ENST00000295927 SCGB1D1O95968 90 aa16.49■□□□□ 0.23
PTX3-201ENST00000295927 PPP1R17O96001 155 aa16.49■□□□□ 0.23
PTX3-201ENST00000295927 C3orf79P0CE67 100 aa16.49■□□□□ 0.23
PTX3-201ENST00000295927 A0A096LNJ9 63 aa16.48■□□□□ 0.23
PTX3-201ENST00000295927 SMIM2Q9BVW6 85 aa16.48■□□□□ 0.23
PTX3-201ENST00000295927 LINC00173Q6ZV60 143 aa16.47■□□□□ 0.23
PTX3-201ENST00000295927 C16orf74Q96GX8 76 aa16.47■□□□□ 0.23
PTX3-201ENST00000295927 M0QY20 66 aa16.46■□□□□ 0.23
PTX3-201ENST00000295927 RRN3P1Q2M238 152 aa16.46■□□□□ 0.23
PTX3-201ENST00000295927 CFAP126Q5VTH2 177 aa16.46■□□□□ 0.23
PTX3-201ENST00000295927 UFSP1Q6NVU6 142 aa16.46■□□□□ 0.23
PTX3-201ENST00000295927 COL6A5A8TX70 2615 aa16.46■□□□□ 0.23
PTX3-201ENST00000295927 IGHV3-73A0A0B4J1V6 119 aa16.45■□□□□ 0.22
PTX3-201ENST00000295927 PLAC8L1A1L4L8 177 aa16.45■□□□□ 0.22
PTX3-201ENST00000295927 NDUFAF3Q9BU61 184 aa16.45■□□□□ 0.22
PTX3-201ENST00000295927 TRGV1A0A0A0MS02 117 aa16.44■□□□□ 0.22
PTX3-201ENST00000295927 HBDP02042 147 aa16.44■□□□□ 0.22
PTX3-201ENST00000295927 KIR2DL5BA0A0G2JN68 375 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 KIR2DL5BA0A0G2JPC4 375 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 TCAPO15273 167 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 RS1O15537 224 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 DAZ2Q13117 558 aaKnown RBP16.43■□□□□ 0.22
PTX3-201ENST00000295927 KIR2DL5AQ8N109 375 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 KIR2DL5BQ8NHK3 375 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 ST20Q9HBF5 79 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 NOP10Q9NPE3 64 aaKnown RBP16.43■□□□□ 0.22
PTX3-201ENST00000295927 HSPB8Q9UJY1 196 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 BTF3P20290 206 aaKnown RBP16.43■□□□□ 0.22
PTX3-201ENST00000295927 KRTAP10-11P60412 298 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 Q8N976 141 aa16.43■□□□□ 0.22
PTX3-201ENST00000295927 APOC4P55056 127 aa16.42■□□□□ 0.22
PTX3-201ENST00000295927 LAGE3Q14657 143 aa16.42■□□□□ 0.22
PTX3-201ENST00000295927 Q6ZTI0 123 aa16.42■□□□□ 0.22
PTX3-201ENST00000295927 CMYA5Q8N3K9 4069 aa16.42■□□□□ 0.22
PTX3-201ENST00000295927 TRBV6-5A0A0K0K1A5 114 aa16.41■□□□□ 0.22
PTX3-201ENST00000295927 FCER1GP30273 86 aa16.41■□□□□ 0.22
PTX3-201ENST00000295927 LGALS9BQ3B8N2 356 aa16.41■□□□□ 0.22
PTX3-201ENST00000295927 RHODO00212 210 aa16.41■□□□□ 0.22
PTX3-201ENST00000295927 TMEM70Q9BUB7 260 aa16.41■□□□□ 0.22
PTX3-201ENST00000295927 IGHV4-30-4P0DP06 118 aa16.4■□□□□ 0.22
PTX3-201ENST00000295927 POLR2KP53803 58 aaKnown RBP16.4■□□□□ 0.22
PTX3-201ENST00000295927 RPL32P62910 135 aaKnown RBP16.4■□□□□ 0.22
PTX3-201ENST00000295927 EGFEM1PQ0D2K5 195 aa16.4■□□□□ 0.22
PTX3-201ENST00000295927 EDA2RQ9HAV5 297 aa16.4■□□□□ 0.22
PTX3-201ENST00000295927 SDHAF1A6NFY7 115 aa16.39■□□□□ 0.21
PTX3-201ENST00000295927 H7C1H1 209 aa16.39■□□□□ 0.21
PTX3-201ENST00000295927 Q6ZSN1 163 aa16.39■□□□□ 0.21
PTX3-201ENST00000295927 NEGR1Q7Z3B1 354 aa16.39■□□□□ 0.21
PTX3-201ENST00000295927 OVOL2Q9BRP0 275 aa16.39■□□□□ 0.21
PTX3-201ENST00000295927 MAP1LC3CQ9BXW4 147 aa16.39■□□□□ 0.21
PTX3-201ENST00000295927 X6R8D5 127 aa16.39■□□□□ 0.21
PTX3-201ENST00000295927 SYS1-DBNDD2H3BUS1 97 aa16.38■□□□□ 0.21
PTX3-201ENST00000295927 OR4C5Q8NGB2 326 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms