RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 Q6ZWC4 215 aa11.87□□□□□ -0.51
TPM1-201ENST00000267996 PRSS3P2Q8NHM4 247 aa11.87□□□□□ -0.51
TPM1-201ENST00000267996 SPXQ9BT56 116 aa11.87□□□□□ -0.51
TPM1-201ENST00000267996 TMEM208Q9BTX3 173 aa11.87□□□□□ -0.51
TPM1-201ENST00000267996 TRAV26-2A0A0B4J265 109 aa11.87□□□□□ -0.51
TPM1-201ENST00000267996 M0R2P5 195 aa11.87□□□□□ -0.51
TPM1-201ENST00000267996 CRYGDP07320 174 aa11.87□□□□□ -0.51
TPM1-201ENST00000267996 SMIM17P0DL12 118 aa11.87□□□□□ -0.51
TPM1-201ENST00000267996 C12orf57Q99622 126 aa11.87□□□□□ -0.51
TPM1-201ENST00000267996 MAP1LC3AQ9H492 121 aa11.87□□□□□ -0.51
TPM1-201ENST00000267996 GOLT1BQ9Y3E0 138 aa11.87□□□□□ -0.51
TPM1-201ENST00000267996 STAB1Q9NY15 2570 aa11.86□□□□□ -0.51
TPM1-201ENST00000267996 LOC389332A0A1B0GUA5 103 aa11.86□□□□□ -0.51
TPM1-201ENST00000267996 LINC01546A6NGU7 62 aa11.86□□□□□ -0.51
TPM1-201ENST00000267996 AZU1P20160 251 aa11.86□□□□□ -0.51
TPM1-201ENST00000267996 JOSD1Q15040 202 aaPredicted RBP11.86□□□□□ -0.51
TPM1-201ENST00000267996 FA2HQ7L5A8 372 aa11.86□□□□□ -0.51
TPM1-201ENST00000267996 IL17DQ8TAD2 202 aa11.86□□□□□ -0.51
TPM1-201ENST00000267996 AP5S1Q9NUS5 200 aa11.86□□□□□ -0.51
TPM1-201ENST00000267996 MGPP08493 103 aa11.85□□□□□ -0.51
TPM1-201ENST00000267996 ZNF705AQ6ZN79 300 aaPredicted RBP11.85□□□□□ -0.51
TPM1-201ENST00000267996 RNASE8Q8TDE3 154 aaKnown RBP11.85□□□□□ -0.51
TPM1-201ENST00000267996 RASL10AQ92737 203 aa11.85□□□□□ -0.51
TPM1-201ENST00000267996 IGLV2-18A0A075B6J9 118 aa11.84□□□□□ -0.51
TPM1-201ENST00000267996 IGHV1-24A0A0C4DH33 117 aa11.84□□□□□ -0.51
TPM1-201ENST00000267996 CSTL1Q9H114 145 aa11.84□□□□□ -0.51
TPM1-201ENST00000267996 NXT2Q9NPJ8 142 aaKnown RBP11.84□□□□□ -0.51
TPM1-201ENST00000267996 IGHV3OR16-12A0A075B7B8 117 aa11.84□□□□□ -0.51
TPM1-201ENST00000267996 A0A087WWL8 130 aa11.84□□□□□ -0.51
TPM1-201ENST00000267996 TMEM263Q8WUH6 116 aaKnown RBP11.84□□□□□ -0.51
TPM1-201ENST00000267996 NDUFAF3Q9BU61 184 aa11.84□□□□□ -0.51
TPM1-201ENST00000267996 CMYA5Q8N3K9 4069 aa11.83□□□□□ -0.52
TPM1-201ENST00000267996 PPP1R17O96001 155 aa11.83□□□□□ -0.52
TPM1-201ENST00000267996 C20orf78Q9BR46 151 aa11.83□□□□□ -0.52
TPM1-201ENST00000267996 A8MWV9 139 aa11.82□□□□□ -0.52
TPM1-201ENST00000267996 PMCHL1Q16048 86 aa11.82□□□□□ -0.52
TPM1-201ENST00000267996 SUMO4Q6EEV6 95 aa11.82□□□□□ -0.52
TPM1-201ENST00000267996 Q8N8P6 123 aa11.82□□□□□ -0.52
TPM1-201ENST00000267996 COL6A5A8TX70 2615 aa11.82□□□□□ -0.52
TPM1-201ENST00000267996 UFSP1Q6NVU6 142 aa11.81□□□□□ -0.52
TPM1-201ENST00000267996 RPL39LQ96EH5 51 aaKnown RBP11.81□□□□□ -0.52
TPM1-201ENST00000267996 A0A096LNJ9 63 aa11.81□□□□□ -0.52
TPM1-201ENST00000267996 KIR2DL5BA0A0G2JN68 375 aa11.81□□□□□ -0.52
TPM1-201ENST00000267996 KIR2DL5BA0A0G2JPC4 375 aa11.81□□□□□ -0.52
TPM1-201ENST00000267996 KIR2DL5AQ8N109 375 aa11.81□□□□□ -0.52
TPM1-201ENST00000267996 KIR2DL5BQ8NHK3 375 aa11.81□□□□□ -0.52
TPM1-201ENST00000267996 SUMO2P61956 95 aaKnown RBP11.8□□□□□ -0.52
TPM1-201ENST00000267996 FAM74A4Q5TZK3 123 aa11.8□□□□□ -0.52
TPM1-201ENST00000267996 C16orf74Q96GX8 76 aa11.8□□□□□ -0.52
TPM1-201ENST00000267996 EDA2RQ9HAV5 297 aa11.8□□□□□ -0.52
TPM1-201ENST00000267996 PLAC8L1A1L4L8 177 aa11.79□□□□□ -0.52
TPM1-201ENST00000267996 M0QY20 66 aa11.79□□□□□ -0.52
TPM1-201ENST00000267996 RPL32P62910 135 aaKnown RBP11.79□□□□□ -0.52
TPM1-201ENST00000267996 DAZ2Q13117 558 aaKnown RBP11.79□□□□□ -0.52
TPM1-201ENST00000267996 CDPF1Q6NVV7 123 aa11.79□□□□□ -0.52
TPM1-201ENST00000267996 SMIM2Q9BVW6 85 aa11.79□□□□□ -0.52
TPM1-201ENST00000267996 TRBV6-5A0A0K0K1A5 114 aa11.78□□□□□ -0.52
TPM1-201ENST00000267996 F5H697 171 aa11.78□□□□□ -0.52
TPM1-201ENST00000267996 RS1O15537 224 aa11.78□□□□□ -0.52
TPM1-201ENST00000267996 LEPROTL1O95214 131 aa11.78□□□□□ -0.52
TPM1-201ENST00000267996 C3orf79P0CE67 100 aa11.78□□□□□ -0.52
TPM1-201ENST00000267996 EGFEM1PQ0D2K5 195 aa11.78□□□□□ -0.52
TPM1-201ENST00000267996 OXLD1Q5BKU9 147 aa11.78□□□□□ -0.52
TPM1-201ENST00000267996 CFAP126Q5VTH2 177 aa11.78□□□□□ -0.52
TPM1-201ENST00000267996 NIT2Q9NQR4 276 aa11.78□□□□□ -0.52
TPM1-201ENST00000267996 MRPL16Q9NX20 251 aaKnown RBP11.78□□□□□ -0.52
TPM1-201ENST00000267996 NACAE9PAV3 2078 aa11.78□□□□□ -0.52
TPM1-201ENST00000267996 KRTDAPP60985 99 aa11.78□□□□□ -0.52
TPM1-201ENST00000267996 ZNF56Q15929 161 aa11.78□□□□□ -0.52
TPM1-201ENST00000267996 RRN3P1Q2M238 152 aa11.78□□□□□ -0.52
TPM1-201ENST00000267996 LGALS9BQ3B8N2 356 aa11.78□□□□□ -0.52
TPM1-201ENST00000267996 Q8N976 141 aa11.78□□□□□ -0.52
TPM1-201ENST00000267996 RHODO00212 210 aa11.77□□□□□ -0.53
TPM1-201ENST00000267996 HBDP02042 147 aa11.77□□□□□ -0.53
TPM1-201ENST00000267996 OVOL2Q9BRP0 275 aa11.77□□□□□ -0.53
TPM1-201ENST00000267996 POLR2KP53803 58 aaKnown RBP11.76□□□□□ -0.53
TPM1-201ENST00000267996 LINC00173Q6ZV60 143 aa11.76□□□□□ -0.53
TPM1-201ENST00000267996 ST20Q9HBF5 79 aa11.76□□□□□ -0.53
TPM1-201ENST00000267996 HSPB8Q9UJY1 196 aa11.76□□□□□ -0.53
TPM1-201ENST00000267996 K7EMI3 77 aa11.75□□□□□ -0.53
TPM1-201ENST00000267996 SCGB1D1O95968 90 aa11.75□□□□□ -0.53
TPM1-201ENST00000267996 FCER1GP30273 86 aa11.75□□□□□ -0.53
TPM1-201ENST00000267996 APOC4P55056 127 aa11.75□□□□□ -0.53
TPM1-201ENST00000267996 KRTAP10-11P60412 298 aa11.75□□□□□ -0.53
TPM1-201ENST00000267996 ZFP2Q6ZN57 461 aa11.75□□□□□ -0.53
TPM1-201ENST00000267996 LAGE3Q14657 143 aa11.75□□□□□ -0.53
TPM1-201ENST00000267996 TMEM70Q9BUB7 260 aa11.75□□□□□ -0.53
TPM1-201ENST00000267996 ANK2Q01484 3957 aa11.74□□□□□ -0.53
TPM1-201ENST00000267996 TRGV1A0A0A0MS02 117 aa11.74□□□□□ -0.53
TPM1-201ENST00000267996 SMIM9A6NGZ8 99 aa11.74□□□□□ -0.53
TPM1-201ENST00000267996 IGHV4-30-4P0DP06 118 aa11.74□□□□□ -0.53
TPM1-201ENST00000267996 BTF3P20290 206 aaKnown RBP11.74□□□□□ -0.53
TPM1-201ENST00000267996 Q6ZTI0 123 aa11.74□□□□□ -0.53
TPM1-201ENST00000267996 NOP10Q9NPE3 64 aaKnown RBP11.74□□□□□ -0.53
TPM1-201ENST00000267996 X6R8D5 127 aa11.74□□□□□ -0.53
TPM1-201ENST00000267996 H7C1H1 209 aa11.73□□□□□ -0.53
TPM1-201ENST00000267996 TCAPO15273 167 aa11.73□□□□□ -0.53
TPM1-201ENST00000267996 ZMAT5Q9UDW3 170 aaKnown RBP11.73□□□□□ -0.53
TPM1-201ENST00000267996 TRBV27A0A0K0K1C4 114 aa11.72□□□□□ -0.53
TPM1-201ENST00000267996 VCYO14598 125 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms