RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 H7C2G1 150 aa12.22□□□□□ -0.45
SEMA3B-214ENST00000619119 HOXB4P17483 251 aaPredicted RBP12.22□□□□□ -0.45
SEMA3B-214ENST00000619119 PLNP26678 52 aa12.22□□□□□ -0.45
SEMA3B-214ENST00000619119 TMEM75Q8N9X5 138 aa12.22□□□□□ -0.45
SEMA3B-214ENST00000619119 UTP20O75691 2785 aaKnown RBP12.21□□□□□ -0.45
SEMA3B-214ENST00000619119 LINC01619G3V211 115 aa12.21□□□□□ -0.45
SEMA3B-214ENST00000619119 CNTFRP26992 372 aa12.21□□□□□ -0.45
SEMA3B-214ENST00000619119 DNAJC30Q96LL9 226 aa12.21□□□□□ -0.45
SEMA3B-214ENST00000619119 PRADC1Q9BSG0 188 aa12.21□□□□□ -0.45
SEMA3B-214ENST00000619119 CRYBG3Q68DQ2 2970 aa12.21□□□□□ -0.46
SEMA3B-214ENST00000619119 TRAV2A0A0B4J234 112 aa12.2□□□□□ -0.46
SEMA3B-214ENST00000619119 CD7P09564 240 aa12.2□□□□□ -0.46
SEMA3B-214ENST00000619119 TEX49A0A1B0GTD5 131 aa12.2□□□□□ -0.46
SEMA3B-214ENST00000619119 CGB1A6NKQ9 187 aa12.2□□□□□ -0.46
SEMA3B-214ENST00000619119 SPANXA1Q9NS26 97 aa12.2□□□□□ -0.46
SEMA3B-214ENST00000619119 A0A1W2PPI3 338 aa12.2□□□□□ -0.46
SEMA3B-214ENST00000619119 SLC25A16P16260 332 aa12.2□□□□□ -0.46
SEMA3B-214ENST00000619119 EMP1P54849 157 aa12.2□□□□□ -0.46
SEMA3B-214ENST00000619119 LINC00311Q8N616 119 aa12.2□□□□□ -0.46
SEMA3B-214ENST00000619119 EPG5Q9HCE0 2579 aa12.19□□□□□ -0.46
SEMA3B-214ENST00000619119 KLHL30-AS1Q8NEE0 82 aa12.19□□□□□ -0.46
SEMA3B-214ENST00000619119 FAM208BQ5VWN6 2430 aa12.19□□□□□ -0.46
SEMA3B-214ENST00000619119 OOSP1A8MZH6 123 aa12.18□□□□□ -0.46
SEMA3B-214ENST00000619119 F8VRH5 84 aa12.18□□□□□ -0.46
SEMA3B-214ENST00000619119 KLK5Q9Y337 293 aaPredicted RBP12.18□□□□□ -0.46
SEMA3B-214ENST00000619119 BUB1B-PAK6H3BSN5 160 aa12.18□□□□□ -0.46
SEMA3B-214ENST00000619119 IGLV1-47P01700 117 aa12.18□□□□□ -0.46
SEMA3B-214ENST00000619119 EGR2P11161 476 aaPredicted RBP12.18□□□□□ -0.46
SEMA3B-214ENST00000619119 IGLV2-23P01705 113 aa12.18□□□□□ -0.46
SEMA3B-214ENST00000619119 LINC01559Q495D7 138 aa12.18□□□□□ -0.46
SEMA3B-214ENST00000619119 C9orf153Q5TBE3 101 aa12.18□□□□□ -0.46
SEMA3B-214ENST00000619119 Q8N8P6 123 aa12.18□□□□□ -0.46
SEMA3B-214ENST00000619119 ZNF462Q96JM2 2506 aa12.17□□□□□ -0.46
SEMA3B-214ENST00000619119 TRAV25A0A0B4J276 109 aa12.17□□□□□ -0.46
SEMA3B-214ENST00000619119 H7C1H1 209 aa12.17□□□□□ -0.46
SEMA3B-214ENST00000619119 FAM19A5Q7Z5A7 132 aaPredicted RBP12.17□□□□□ -0.46
SEMA3B-214ENST00000619119 TRBV6-1A0A0K0K1D8 114 aa12.17□□□□□ -0.46
SEMA3B-214ENST00000619119 HES1Q14469 280 aa12.17□□□□□ -0.46
SEMA3B-214ENST00000619119 ZNF56Q15929 161 aa12.17□□□□□ -0.46
SEMA3B-214ENST00000619119 IGHV1-3A0A0C4DH29 117 aa12.16□□□□□ -0.46
SEMA3B-214ENST00000619119 PRB1P04280 392 aa12.16□□□□□ -0.46
SEMA3B-214ENST00000619119 DTX2Q86UW9 622 aa12.16□□□□□ -0.46
SEMA3B-214ENST00000619119 C8orf31Q8N9H6 132 aa12.16□□□□□ -0.46
SEMA3B-214ENST00000619119 TRBV19A0A075B6N1 114 aa12.16□□□□□ -0.46
SEMA3B-214ENST00000619119 CFC1BP0CG36 223 aa12.16□□□□□ -0.46
SEMA3B-214ENST00000619119 CFC1P0CG37 223 aa12.16□□□□□ -0.46
SEMA3B-214ENST00000619119 VMA21Q3ZAQ7 101 aa12.16□□□□□ -0.46
SEMA3B-214ENST00000619119 SIGLEC15Q6ZMC9 328 aa12.16□□□□□ -0.46
SEMA3B-214ENST00000619119 C10orf126Q8N4M7 172 aa12.16□□□□□ -0.46
SEMA3B-214ENST00000619119 Q8TAT8 98 aa12.16□□□□□ -0.46
SEMA3B-214ENST00000619119 TRAV26-2A0A0B4J265 109 aa12.16□□□□□ -0.46
SEMA3B-214ENST00000619119 LAGE3Q14657 143 aa12.16□□□□□ -0.46
SEMA3B-214ENST00000619119 TMEM167AQ8TBQ9 72 aa12.16□□□□□ -0.46
SEMA3B-214ENST00000619119 CENPEQ02224 2701 aa12.15□□□□□ -0.46
SEMA3B-214ENST00000619119 CSMD2Q7Z408 3487 aa12.15□□□□□ -0.46
SEMA3B-214ENST00000619119 IGKV2-40A0A087WW87 121 aaPredicted RBP12.15□□□□□ -0.46
SEMA3B-214ENST00000619119 IGKV2D-40P01614 121 aaPredicted RBP12.15□□□□□ -0.46
SEMA3B-214ENST00000619119 ORM1P02763 201 aa12.15□□□□□ -0.46
SEMA3B-214ENST00000619119 LINC01546A6NGU7 62 aa12.15□□□□□ -0.46
SEMA3B-214ENST00000619119 IGHV4-39P01824 125 aa12.15□□□□□ -0.46
SEMA3B-214ENST00000619119 EDA2RQ9HAV5 297 aa12.15□□□□□ -0.46
SEMA3B-214ENST00000619119 DOPEY1Q5JWR5 2465 aa12.15□□□□□ -0.46
SEMA3B-214ENST00000619119 NPFFO15130 113 aa12.14□□□□□ -0.47
SEMA3B-214ENST00000619119 MRPS12O15235 138 aaKnown RBP12.14□□□□□ -0.47
SEMA3B-214ENST00000619119 DUSP14O95147 198 aaKnown RBP12.14□□□□□ -0.47
SEMA3B-214ENST00000619119 CELSR1Q9NYQ6 3014 aa12.14□□□□□ -0.47
SEMA3B-214ENST00000619119 ZFP36P26651 326 aaKnown RBP12.14□□□□□ -0.47
SEMA3B-214ENST00000619119 BEX4Q9NWD9 120 aaPredicted RBP12.14□□□□□ -0.47
SEMA3B-214ENST00000619119 FAM236AA0A1B0GUQ0 79 aa12.14□□□□□ -0.47
SEMA3B-214ENST00000619119 FAM236BA0A1B0GV22 79 aa12.14□□□□□ -0.47
SEMA3B-214ENST00000619119 PRR25Q96S07 402 aa12.14□□□□□ -0.47
SEMA3B-214ENST00000619119 LRRK2Q5S007 2527 aa12.13□□□□□ -0.47
SEMA3B-214ENST00000619119 TIMM23O14925 209 aa12.13□□□□□ -0.47
SEMA3B-214ENST00000619119 PLGLAQ15195 96 aa12.13□□□□□ -0.47
SEMA3B-214ENST00000619119 PRO1854Q9UHT4 67 aa12.13□□□□□ -0.47
SEMA3B-214ENST00000619119 ZFHX3Q15911 3703 aa12.13□□□□□ -0.47
SEMA3B-214ENST00000619119 IGLV2-18A0A075B6J9 118 aa12.13□□□□□ -0.47
SEMA3B-214ENST00000619119 ZNF80P51504 273 aaPredicted RBP12.13□□□□□ -0.47
SEMA3B-214ENST00000619119 LY6G5BQ8NDX9 201 aa12.13□□□□□ -0.47
SEMA3B-214ENST00000619119 TMEM14CQ9P0S9 112 aa12.13□□□□□ -0.47
SEMA3B-214ENST00000619119 IGHG4P01861 327 aa12.12□□□□□ -0.47
SEMA3B-214ENST00000619119 HERVK_113P63121 156 aa12.12□□□□□ -0.47
SEMA3B-214ENST00000619119 Q6ZS46 218 aa12.12□□□□□ -0.47
SEMA3B-214ENST00000619119 BPESC1Q9GZL8 116 aa12.12□□□□□ -0.47
SEMA3B-214ENST00000619119 H3BMM0 161 aa12.12□□□□□ -0.47
SEMA3B-214ENST00000619119 IGLC6P0CF74 106 aa12.12□□□□□ -0.47
SEMA3B-214ENST00000619119 Q1RN00 199 aa12.12□□□□□ -0.47
SEMA3B-214ENST00000619119 MRGPRG-AS1Q2M3A8 158 aa12.12□□□□□ -0.47
SEMA3B-214ENST00000619119 UBE2WQ96B02 151 aa12.12□□□□□ -0.47
SEMA3B-214ENST00000619119 SCGB3A1Q96QR1 104 aa12.11□□□□□ -0.47
SEMA3B-214ENST00000619119 J3KT08 172 aa12.11□□□□□ -0.47
SEMA3B-214ENST00000619119 NDUFA7O95182 113 aa12.11□□□□□ -0.47
SEMA3B-214ENST00000619119 TRGV3P03979 118 aa12.11□□□□□ -0.47
SEMA3B-214ENST00000619119 SIGLEC9Q9Y336 463 aa12.1□□□□□ -0.47
SEMA3B-214ENST00000619119 ELANEP08246 267 aa12.1□□□□□ -0.47
SEMA3B-214ENST00000619119 LINC01620Q4KN68 170 aa12.1□□□□□ -0.47
SEMA3B-214ENST00000619119 VMO1Q7Z5L0 202 aa12.1□□□□□ -0.47
SEMA3B-214ENST00000619119 RPL27AP46776 148 aaKnown RBP12.1□□□□□ -0.47
SEMA3B-214ENST00000619119 CEMP1Q6PRD7 247 aaPredicted RBP12.1□□□□□ -0.47
SEMA3B-214ENST00000619119 DPM3Q9P2X0 92 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms