RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 KLLNB2CW77 178 aa12.76□□□□□ -0.37
PRKCB-209ENST00000498058 ZNF324O75467 553 aaPredicted RBP12.76□□□□□ -0.37
PRKCB-209ENST00000498058 BTN1A1Q13410 526 aa12.76□□□□□ -0.37
PRKCB-209ENST00000498058 CENPWQ5EE01 88 aa12.76□□□□□ -0.37
PRKCB-209ENST00000498058 SMIM7Q9BQ49 75 aa12.76□□□□□ -0.37
PRKCB-209ENST00000498058 BIN3Q9NQY0 253 aa12.76□□□□□ -0.37
PRKCB-209ENST00000498058 C7orf71A4D174 169 aa12.75□□□□□ -0.37
PRKCB-209ENST00000498058 ZNF727A8MUV8 499 aa12.75□□□□□ -0.37
PRKCB-209ENST00000498058 C9JCJ5 164 aa12.75□□□□□ -0.37
PRKCB-209ENST00000498058 H3BNG1 76 aa12.75□□□□□ -0.37
PRKCB-209ENST00000498058 RNASE4P34096 147 aaKnown RBP12.75□□□□□ -0.37
PRKCB-209ENST00000498058 TMEM183AQ8IXX5 376 aa12.75□□□□□ -0.37
PRKCB-209ENST00000498058 ZFAND2AQ8N6M9 145 aa12.75□□□□□ -0.37
PRKCB-209ENST00000498058 SFTA3P0C7M3 94 aa12.74□□□□□ -0.37
PRKCB-209ENST00000498058 NDUFA5Q16718 116 aa12.74□□□□□ -0.37
PRKCB-209ENST00000498058 PRR9Q5T870 116 aa12.74□□□□□ -0.37
PRKCB-209ENST00000498058 C9JQL5 133 aa12.73□□□□□ -0.37
PRKCB-209ENST00000498058 TTC32Q5I0X7 151 aa12.73□□□□□ -0.37
PRKCB-209ENST00000498058 COX8CQ7Z4L0 72 aa12.73□□□□□ -0.37
PRKCB-209ENST00000498058 TVP23CQ96ET8 276 aa12.73□□□□□ -0.37
PRKCB-209ENST00000498058 C18orf15Q96N68 181 aa12.73□□□□□ -0.37
PRKCB-209ENST00000498058 TP53TG3Q9ULZ0 132 aa12.73□□□□□ -0.37
PRKCB-209ENST00000498058 LY96Q9Y6Y9 160 aa12.73□□□□□ -0.37
PRKCB-209ENST00000498058 TRAV21A0A0B4J279 112 aa12.72□□□□□ -0.37
PRKCB-209ENST00000498058 GCGP01275 180 aa12.72□□□□□ -0.37
PRKCB-209ENST00000498058 Q6ZRN7 208 aaPredicted RBP12.72□□□□□ -0.37
PRKCB-209ENST00000498058 C8orf49Q96NF6 230 aa12.72□□□□□ -0.37
PRKCB-209ENST00000498058 LINC00467Q9BRT7 94 aa12.72□□□□□ -0.37
PRKCB-209ENST00000498058 TRGV1A0A0A0MS02 117 aa12.71□□□□□ -0.37
PRKCB-209ENST00000498058 A0A1W2PPQ1 181 aa12.71□□□□□ -0.37
PRKCB-209ENST00000498058 SPINK4O60575 86 aa12.71□□□□□ -0.37
PRKCB-209ENST00000498058 PFN1P07737 140 aaKnown RBP12.71□□□□□ -0.37
PRKCB-209ENST00000498058 MGST1P10620 155 aaKnown RBP12.71□□□□□ -0.37
PRKCB-209ENST00000498058 BTF3P20290 206 aaKnown RBP12.71□□□□□ -0.37
PRKCB-209ENST00000498058 TMEM241Q24JQ0 296 aa12.71□□□□□ -0.37
PRKCB-209ENST00000498058 ANXA2RQ3ZCQ2 193 aa12.71□□□□□ -0.37
PRKCB-209ENST00000498058 FAM162BQ5T6X4 162 aa12.71□□□□□ -0.37
PRKCB-209ENST00000498058 Q6AWC8 147 aa12.71□□□□□ -0.37
PRKCB-209ENST00000498058 Q8N1X5 172 aa12.71□□□□□ -0.37
PRKCB-209ENST00000498058 MLST8Q9BVC4 326 aa12.71□□□□□ -0.37
PRKCB-209ENST00000498058 TRBV20OR9-2A0A075B6H5 130 aa12.7□□□□□ -0.38
PRKCB-209ENST00000498058 TRGV2A0A075B6R0 118 aa12.7□□□□□ -0.38
PRKCB-209ENST00000498058 FABP5P3A8MUU1 101 aa12.7□□□□□ -0.38
PRKCB-209ENST00000498058 TCL1AP56279 114 aa12.7□□□□□ -0.38
PRKCB-209ENST00000498058 LINC00315P59091 139 aa12.7□□□□□ -0.38
PRKCB-209ENST00000498058 NHLRC2Q8NBF2 726 aa12.7□□□□□ -0.38
PRKCB-209ENST00000498058 ZC2HC1AQ96GY0 325 aa12.7□□□□□ -0.38
PRKCB-209ENST00000498058 NAT8Q9UHE5 227 aa12.7□□□□□ -0.38
PRKCB-209ENST00000498058 TMEM218A2RU14 115 aa12.69□□□□□ -0.38
PRKCB-209ENST00000498058 FUSP35637 526 aaKnown RBP eCLIP12.69□□□□□ -0.382e-6■□□□□ 11
PRKCB-209ENST00000498058 DAZAP1Q96EP5 407 aaKnown RBP12.69□□□□□ -0.38
PRKCB-209ENST00000498058 IGHV3-53P01767 116 aa12.68□□□□□ -0.38
PRKCB-209ENST00000498058 SCRT2Q9NQ03 307 aa12.68□□□□□ -0.38
PRKCB-209ENST00000498058 MRPL16Q9NX20 251 aaKnown RBP12.68□□□□□ -0.38
PRKCB-209ENST00000498058 TNFRSF18Q9Y5U5 241 aa12.68□□□□□ -0.38
PRKCB-209ENST00000498058 F8W036 122 aa12.67□□□□□ -0.38
PRKCB-209ENST00000498058 IGLV2-8P01709 118 aa12.67□□□□□ -0.38
PRKCB-209ENST00000498058 PRR27Q6MZM9 219 aa12.67□□□□□ -0.38
PRKCB-209ENST00000498058 FAM159AQ6UWV7 190 aa12.67□□□□□ -0.38
PRKCB-209ENST00000498058 OCC1Q8TAD7 63 aa12.67□□□□□ -0.38
PRKCB-209ENST00000498058 KCNS1Q96KK3 526 aa12.67□□□□□ -0.38
PRKCB-209ENST00000498058 PGPEP1LA6NFU8 196 aa12.66□□□□□ -0.38
PRKCB-209ENST00000498058 SH2D1AO60880 128 aa12.66□□□□□ -0.38
PRKCB-209ENST00000498058 ZNF80P51504 273 aaPredicted RBP12.66□□□□□ -0.38
PRKCB-209ENST00000498058 IBA57Q5T440 356 aaKnown RBP12.66□□□□□ -0.38
PRKCB-209ENST00000498058 LINC01551Q86U37 167 aa12.66□□□□□ -0.38
PRKCB-209ENST00000498058 SEC11CQ9BY50 192 aa12.66□□□□□ -0.38
PRKCB-209ENST00000498058 IGHV1OR15-1A0A075B7D0 117 aa12.65□□□□□ -0.38
PRKCB-209ENST00000498058 SIVA1O15304 175 aa12.65□□□□□ -0.38
PRKCB-209ENST00000498058 PAX4O43316 350 aa12.65□□□□□ -0.38
PRKCB-209ENST00000498058 NXPH4O95158 308 aa12.65□□□□□ -0.38
PRKCB-209ENST00000498058 PNRC1Q12796 327 aaPredicted RBP12.65□□□□□ -0.38
PRKCB-209ENST00000498058 FHL2Q14192 279 aa12.65□□□□□ -0.38
PRKCB-209ENST00000498058 ADIRFQ15847 76 aa12.65□□□□□ -0.38
PRKCB-209ENST00000498058 SDF2L1Q9HCN8 221 aa12.65□□□□□ -0.38
PRKCB-209ENST00000498058 NAGKQ9UJ70 344 aa12.65□□□□□ -0.38
PRKCB-209ENST00000498058 ORM1P02763 201 aa12.64□□□□□ -0.39
PRKCB-209ENST00000498058 TRGV11A0A075B6L2 103 aa12.63□□□□□ -0.39
PRKCB-209ENST00000498058 KRBOX1C9JBD0 128 aa12.63□□□□□ -0.39
PRKCB-209ENST00000498058 K7EN84 100 aa12.63□□□□□ -0.39
PRKCB-209ENST00000498058 P01737 135 aa12.63□□□□□ -0.39
PRKCB-209ENST00000498058 CRIP1P50238 77 aa12.63□□□□□ -0.39
PRKCB-209ENST00000498058 CRYBA4P53673 196 aa12.63□□□□□ -0.39
PRKCB-209ENST00000498058 TDRG1Q3Y452 100 aa12.63□□□□□ -0.39
PRKCB-209ENST00000498058 ICOSQ9Y6W8 199 aa12.63□□□□□ -0.39
PRKCB-209ENST00000498058 XKRY2A2RUG3 117 aa12.62□□□□□ -0.39
PRKCB-209ENST00000498058 B4DEV8 164 aa12.62□□□□□ -0.39
PRKCB-209ENST00000498058 RPL23P62829 140 aaKnown RBP12.62□□□□□ -0.39
PRKCB-209ENST00000498058 LINC01559Q495D7 138 aa12.62□□□□□ -0.39
PRKCB-209ENST00000498058 MUC21Q5SSG8 566 aa12.62□□□□□ -0.39
PRKCB-209ENST00000498058 LYPD5Q6UWN5 251 aa12.62□□□□□ -0.39
PRKCB-209ENST00000498058 FAM231DQ6ZW35 169 aa12.62□□□□□ -0.39
PRKCB-209ENST00000498058 C15orf54Q8N8G6 183 aa12.62□□□□□ -0.39
PRKCB-209ENST00000498058 PRO0255Q9UI72 69 aa12.62□□□□□ -0.39
PRKCB-209ENST00000498058 C19orf71A6NCJ1 209 aa12.61□□□□□ -0.39
PRKCB-209ENST00000498058 ERVFC1-1P60608 527 aa12.61□□□□□ -0.39
PRKCB-209ENST00000498058 RPS20P60866 119 aaKnown RBP12.61□□□□□ -0.39
PRKCB-209ENST00000498058 SLC7A5P1Q8MH63 180 aa12.61□□□□□ -0.39
PRKCB-209ENST00000498058 MDFICQ9P1T7 246 aa12.61□□□□□ -0.39
PRKCB-209ENST00000498058 FAT1Q14517 4588 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms