RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 DNLZQ5SXM8 178 aa10.63□□□□□ -0.71
UBE3B-201ENST00000340074 UBE2DNLQ8IWF7 75 aa10.63□□□□□ -0.71
UBE3B-201ENST00000340074 OR4C5Q8NGB2 326 aa10.63□□□□□ -0.71
UBE3B-201ENST00000340074 IL36BQ9NZH7 164 aa10.63□□□□□ -0.71
UBE3B-201ENST00000340074 HHLA3Q9XRX5 114 aa10.63□□□□□ -0.71
UBE3B-201ENST00000340074 TRBV20OR9-2A0A075B6H5 130 aa10.62□□□□□ -0.71
UBE3B-201ENST00000340074 IGLV2-8P01709 118 aa10.62□□□□□ -0.71
UBE3B-201ENST00000340074 CRYBA4P53673 196 aa10.62□□□□□ -0.71
UBE3B-201ENST00000340074 RPL19P84098 196 aaKnown RBP10.62□□□□□ -0.71
UBE3B-201ENST00000340074 ZNF506Q5JVG8 444 aa10.62□□□□□ -0.71
UBE3B-201ENST00000340074 PTH2Q96A98 100 aa10.62□□□□□ -0.71
UBE3B-201ENST00000340074 PRO0255Q9UI72 69 aa10.62□□□□□ -0.71
UBE3B-201ENST00000340074 PAX4O43316 350 aa10.61□□□□□ -0.71
UBE3B-201ENST00000340074 ARMS2P0C7Q2 107 aa10.61□□□□□ -0.71
UBE3B-201ENST00000340074 MGST1P10620 155 aaKnown RBP10.61□□□□□ -0.71
UBE3B-201ENST00000340074 TOR2AQ5JU69 321 aa10.61□□□□□ -0.71
UBE3B-201ENST00000340074 PCNPQ8WW12 178 aaKnown RBP10.61□□□□□ -0.71
UBE3B-201ENST00000340074 SLAQ13239 276 aa10.6□□□□□ -0.71
UBE3B-201ENST00000340074 RNF212Q495C1 297 aa10.6□□□□□ -0.71
UBE3B-201ENST00000340074 CFAP126Q5VTH2 177 aa10.6□□□□□ -0.71
UBE3B-201ENST00000340074 SMIM12Q96EX1 92 aa10.6□□□□□ -0.71
UBE3B-201ENST00000340074 EIF5A2Q9GZV4 153 aaKnown RBP10.6□□□□□ -0.71
UBE3B-201ENST00000340074 A0A096LPF7 62 aa10.59□□□□□ -0.71
UBE3B-201ENST00000340074 RS1O15537 224 aa10.59□□□□□ -0.71
UBE3B-201ENST00000340074 FAM210AQ96ND0 272 aa10.59□□□□□ -0.71
UBE3B-201ENST00000340074 TMEM250H0YL14 139 aa10.58□□□□□ -0.72
UBE3B-201ENST00000340074 CCL18P55774 89 aa10.58□□□□□ -0.72
UBE3B-201ENST00000340074 DMRTA1Q5VZB9 504 aa10.58□□□□□ -0.72
UBE3B-201ENST00000340074 PARLQ9H300 379 aa10.58□□□□□ -0.72
UBE3B-201ENST00000340074 SCRT2Q9NQ03 307 aa10.58□□□□□ -0.72
UBE3B-201ENST00000340074 PHLDA3Q9Y5J5 127 aa10.58□□□□□ -0.72
UBE3B-201ENST00000340074 DNAH6Q9C0G6 4158 aa10.58□□□□□ -0.72
UBE3B-201ENST00000340074 IGHV3-73A0A0B4J1V6 119 aa10.58□□□□□ -0.72
UBE3B-201ENST00000340074 CEBPGP53567 150 aa10.58□□□□□ -0.72
UBE3B-201ENST00000340074 PIK3CD-AS1Q5SR53 167 aa10.58□□□□□ -0.72
UBE3B-201ENST00000340074 DAZAP1Q96EP5 407 aaKnown RBP10.58□□□□□ -0.72
UBE3B-201ENST00000340074 LINC00588Q9Y4M8 146 aa10.58□□□□□ -0.72
UBE3B-201ENST00000340074 ICOSQ9Y6W8 199 aa10.58□□□□□ -0.72
UBE3B-201ENST00000340074 C19orf71A6NCJ1 209 aa10.57□□□□□ -0.72
UBE3B-201ENST00000340074 A8MWV9 139 aa10.57□□□□□ -0.72
UBE3B-201ENST00000340074 CXCL1P09341 107 aa10.57□□□□□ -0.72
UBE3B-201ENST00000340074 ESRGQ1W209 222 aa10.57□□□□□ -0.72
UBE3B-201ENST00000340074 SYT8Q8NBV8 401 aa10.57□□□□□ -0.72
UBE3B-201ENST00000340074 JPT2Q9H910 190 aa10.57□□□□□ -0.72
UBE3B-201ENST00000340074 M0R381 172 aa10.56□□□□□ -0.72
UBE3B-201ENST00000340074 CIDEAO60543 219 aa10.56□□□□□ -0.72
UBE3B-201ENST00000340074 MED14OSP0DP75 135 aa10.56□□□□□ -0.72
UBE3B-201ENST00000340074 GYPEP15421 78 aa10.56□□□□□ -0.72
UBE3B-201ENST00000340074 GATA1P15976 413 aaPredicted RBP10.56□□□□□ -0.72
UBE3B-201ENST00000340074 OCC1Q8TAD7 63 aa10.56□□□□□ -0.72
UBE3B-201ENST00000340074 BIN3Q9NQY0 253 aa10.56□□□□□ -0.72
UBE3B-201ENST00000340074 IGLV2-18A0A075B6J9 118 aa10.55□□□□□ -0.72
UBE3B-201ENST00000340074 K7EN84 100 aa10.55□□□□□ -0.72
UBE3B-201ENST00000340074 K7EQD1 137 aa10.55□□□□□ -0.72
UBE3B-201ENST00000340074 NDUFS6O75380 124 aaKnown RBP10.55□□□□□ -0.72
UBE3B-201ENST00000340074 FAM3BP58499 235 aaPredicted RBP10.55□□□□□ -0.72
UBE3B-201ENST00000340074 MRPL23Q16540 153 aaKnown RBP10.55□□□□□ -0.72
UBE3B-201ENST00000340074 ZFP82Q8N141 532 aa10.55□□□□□ -0.72
UBE3B-201ENST00000340074 SAMD10Q9BYL1 202 aa10.55□□□□□ -0.72
UBE3B-201ENST00000340074 LOC100131303A0A0U1RQF7 123 aa10.54□□□□□ -0.72
UBE3B-201ENST00000340074 M0R2N4 97 aa10.54□□□□□ -0.72
UBE3B-201ENST00000340074 SNAI2O43623 268 aa10.54□□□□□ -0.72
UBE3B-201ENST00000340074 P01737 135 aa10.54□□□□□ -0.72
UBE3B-201ENST00000340074 SRP19P09132 144 aaKnown RBP10.54□□□□□ -0.72
UBE3B-201ENST00000340074 GZMBP10144 247 aa10.54□□□□□ -0.72
UBE3B-201ENST00000340074 SLC25A29Q8N8R3 303 aa10.54□□□□□ -0.72
UBE3B-201ENST00000340074 OR2D3Q8NGH3 330 aa10.54□□□□□ -0.72
UBE3B-201ENST00000340074 OR10AG1Q8NH19 301 aa10.54□□□□□ -0.72
UBE3B-201ENST00000340074 SSBP4Q9BWG4 385 aaPredicted RBP10.54□□□□□ -0.72
UBE3B-201ENST00000340074 OR5AL1P0C617 328 aa10.53□□□□□ -0.72
UBE3B-201ENST00000340074 ZFP2Q6ZN57 461 aa10.53□□□□□ -0.72
UBE3B-201ENST00000340074 ZNRF2Q8NHG8 242 aa10.53□□□□□ -0.72
UBE3B-201ENST00000340074 SFRP2Q96HF1 295 aa10.53□□□□□ -0.72
UBE3B-201ENST00000340074 MUC21A0A0G2JKD1 596 aa10.52□□□□□ -0.73
UBE3B-201ENST00000340074 MUC21A0A140T8X8 626 aa10.52□□□□□ -0.73
UBE3B-201ENST00000340074 TRBV6-4A0A1B0GX49 114 aa10.52□□□□□ -0.73
UBE3B-201ENST00000340074 SRIP30626 198 aa10.52□□□□□ -0.73
UBE3B-201ENST00000340074 RPS20P60866 119 aaKnown RBP10.52□□□□□ -0.73
UBE3B-201ENST00000340074 FAM74A4Q5TZK3 123 aa10.52□□□□□ -0.73
UBE3B-201ENST00000340074 UFSP1Q6NVU6 142 aa10.52□□□□□ -0.73
UBE3B-201ENST00000340074 Q6ZSN1 163 aa10.52□□□□□ -0.73
UBE3B-201ENST00000340074 NEGR1Q7Z3B1 354 aa10.52□□□□□ -0.73
UBE3B-201ENST00000340074 NUDT10Q8NFP7 164 aa10.52□□□□□ -0.73
UBE3B-201ENST00000340074 NUDT11Q96G61 164 aa10.52□□□□□ -0.73
UBE3B-201ENST00000340074 SMIM7Q9BQ49 75 aa10.52□□□□□ -0.73
UBE3B-201ENST00000340074 RNASE7Q9H1E1 156 aaKnown RBP10.52□□□□□ -0.73
UBE3B-201ENST00000340074 FRAS1Q86XX4 4008 aa10.52□□□□□ -0.73
UBE3B-201ENST00000340074 A0A087WWL8 130 aa10.51□□□□□ -0.73
UBE3B-201ENST00000340074 NXPH4O95158 308 aa10.51□□□□□ -0.73
UBE3B-201ENST00000340074 SSTP61278 116 aa10.51□□□□□ -0.73
UBE3B-201ENST00000340074 RHOHQ15669 191 aa10.51□□□□□ -0.73
UBE3B-201ENST00000340074 LYPD5Q6UWN5 251 aa10.51□□□□□ -0.73
UBE3B-201ENST00000340074 PRADC1Q9BSG0 188 aa10.51□□□□□ -0.73
UBE3B-201ENST00000340074 MRPS16Q9Y3D3 137 aaKnown RBP10.51□□□□□ -0.73
UBE3B-201ENST00000340074 ZNF727A8MUV8 499 aa10.5□□□□□ -0.73
UBE3B-201ENST00000340074 C9JQL5 133 aa10.5□□□□□ -0.73
UBE3B-201ENST00000340074 RHODO00212 210 aa10.5□□□□□ -0.73
UBE3B-201ENST00000340074 IGLC6P0CF74 106 aa10.5□□□□□ -0.73
UBE3B-201ENST00000340074 SRSF3P84103 164 aaKnown RBP10.5□□□□□ -0.73
UBE3B-201ENST00000340074 SPANXN1Q5VSR9 72 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms