RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 Q6ZUT4 128 aa12.62□□□□□ -0.39
UBR3-201ENST00000272793 NHSQ6T4R5 1651 aa12.62□□□□□ -0.39
UBR3-201ENST00000272793 PRYO14603 147 aa12.62□□□□□ -0.39
UBR3-201ENST00000272793 RAI1Q7Z5J4 1906 aaPredicted RBP12.62□□□□□ -0.39
UBR3-201ENST00000272793 CFPP27918 469 aa12.62□□□□□ -0.39
UBR3-201ENST00000272793 LYPD3O95274 346 aa12.61□□□□□ -0.39
UBR3-201ENST00000272793 IGLL1P15814 213 aa12.61□□□□□ -0.39
UBR3-201ENST00000272793 LYPD6BQ8NI32 183 aa12.61□□□□□ -0.39
UBR3-201ENST00000272793 MLANAQ16655 118 aa12.61□□□□□ -0.39
UBR3-201ENST00000272793 DAND5Q8N907 189 aa12.61□□□□□ -0.39
UBR3-201ENST00000272793 H0YGX0 51 aa12.61□□□□□ -0.39
UBR3-201ENST00000272793 LGALS9O00182 355 aa12.61□□□□□ -0.39
UBR3-201ENST00000272793 PRR20EP86478 221 aa12.61□□□□□ -0.39
UBR3-201ENST00000272793 PRR20CP86479 221 aa12.61□□□□□ -0.39
UBR3-201ENST00000272793 PRR20DP86480 221 aa12.61□□□□□ -0.39
UBR3-201ENST00000272793 PRR20BP86481 221 aa12.61□□□□□ -0.39
UBR3-201ENST00000272793 PRR20AP86496 221 aa12.61□□□□□ -0.39
UBR3-201ENST00000272793 RUSC1-AS1Q66K80 236 aa12.61□□□□□ -0.39
UBR3-201ENST00000272793 MRPL53Q96EL3 112 aaKnown RBP12.61□□□□□ -0.39
UBR3-201ENST00000272793 SMIM10L1P0DMW3 83 aa12.61□□□□□ -0.39
UBR3-201ENST00000272793 SMIM10Q96HG1 83 aa12.61□□□□□ -0.39
UBR3-201ENST00000272793 FAM236DA0A1B0GTK5 79 aa12.6□□□□□ -0.39
UBR3-201ENST00000272793 FAM236CP0DP71 79 aa12.6□□□□□ -0.39
UBR3-201ENST00000272793 LYL1P12980 280 aa12.6□□□□□ -0.39
UBR3-201ENST00000272793 HIST2H2BDQ6DRA6 164 aa12.6□□□□□ -0.39
UBR3-201ENST00000272793 KIAA1549LQ6ZVL6 1849 aa12.6□□□□□ -0.39
UBR3-201ENST00000272793 NRXN3Q9Y4C0 1643 aa12.6□□□□□ -0.39
UBR3-201ENST00000272793 Q6ZVH6 145 aa12.6□□□□□ -0.39
UBR3-201ENST00000272793 DIRC1Q969H9 104 aa12.6□□□□□ -0.39
UBR3-201ENST00000272793 GYPEP15421 78 aa12.59□□□□□ -0.39
UBR3-201ENST00000272793 PAQR4Q8N4S7 273 aaPredicted RBP12.59□□□□□ -0.39
UBR3-201ENST00000272793 NDUFV3P56181 108 aaKnown RBP12.59□□□□□ -0.39
UBR3-201ENST00000272793 FOXI2Q6ZQN5 318 aa12.59□□□□□ -0.39
UBR3-201ENST00000272793 LOXL1Q08397 574 aaPredicted RBP12.59□□□□□ -0.39
UBR3-201ENST00000272793 A0A096LNI7 61 aa12.59□□□□□ -0.39
UBR3-201ENST00000272793 NDUFS7O75251 213 aa12.59□□□□□ -0.39
UBR3-201ENST00000272793 LRP5O75197 1615 aa12.59□□□□□ -0.39
UBR3-201ENST00000272793 RNF223E7ERA6 249 aa12.58□□□□□ -0.4
UBR3-201ENST00000272793 F8W735 103 aaPredicted RBP12.58□□□□□ -0.4
UBR3-201ENST00000272793 LY96Q9Y6Y9 160 aa12.58□□□□□ -0.4
UBR3-201ENST00000272793 SONP18583 2426 aaKnown RBP12.58□□□□□ -0.4
UBR3-201ENST00000272793 Q0VG73 95 aa12.58□□□□□ -0.4
UBR3-201ENST00000272793 SAP25Q8TEE9 199 aa12.58□□□□□ -0.4
UBR3-201ENST00000272793 FNDC1Q4ZHG4 1894 aaPredicted RBP12.58□□□□□ -0.4
UBR3-201ENST00000272793 VPREB1P12018 145 aa12.58□□□□□ -0.4
UBR3-201ENST00000272793 ADCYAP1P18509 176 aa12.58□□□□□ -0.4
UBR3-201ENST00000272793 X6R8D5 127 aa12.58□□□□□ -0.4
UBR3-201ENST00000272793 CREBBPQ92793 2442 aa12.57□□□□□ -0.4
UBR3-201ENST00000272793 DOPEY1Q5JWR5 2465 aa12.57□□□□□ -0.4
UBR3-201ENST00000272793 RIF1Q5UIP0 2472 aaKnown RBP12.57□□□□□ -0.4
UBR3-201ENST00000272793 PMAIP1Q13794 54 aa12.57□□□□□ -0.4
UBR3-201ENST00000272793 KIR2DL5BQ8NHK3 375 aa12.57□□□□□ -0.4
UBR3-201ENST00000272793 RNF138Q8WVD3 245 aa12.57□□□□□ -0.4
UBR3-201ENST00000272793 TRAV1-1A0A0B4J248 108 aa12.57□□□□□ -0.4
UBR3-201ENST00000272793 RBAKDNA6NC62 111 aa12.57□□□□□ -0.4
UBR3-201ENST00000272793 C20orf204Q6ZNR8 217 aa12.57□□□□□ -0.4
UBR3-201ENST00000272793 Q6ZWC4 215 aa12.57□□□□□ -0.4
UBR3-201ENST00000272793 C9orf85Q96MD7 179 aa12.57□□□□□ -0.4
UBR3-201ENST00000272793 CYYR1Q96J86 154 aa12.57□□□□□ -0.4
UBR3-201ENST00000272793 SIVA1O15304 175 aa12.56□□□□□ -0.4
UBR3-201ENST00000272793 SPRR3Q9UBC9 169 aa12.56□□□□□ -0.4
UBR3-201ENST00000272793 C20orf197Q8N268 126 aa12.56□□□□□ -0.4
UBR3-201ENST00000272793 UBE2D4Q9Y2X8 147 aa12.56□□□□□ -0.4
UBR3-201ENST00000272793 CLEC2BQ92478 149 aa12.56□□□□□ -0.4
UBR3-201ENST00000272793 TNRC6CQ9HCJ0 1690 aaKnown RBP12.56□□□□□ -0.4
UBR3-201ENST00000272793 A0A1B0GW64 132 aa12.56□□□□□ -0.4
UBR3-201ENST00000272793 Q96MF0 132 aa12.55□□□□□ -0.4
UBR3-201ENST00000272793 BPESC1Q9GZL8 116 aa12.55□□□□□ -0.4
UBR3-201ENST00000272793 TRAV26-1A0A087WT03 109 aa12.55□□□□□ -0.4
UBR3-201ENST00000272793 ELANEP08246 267 aa12.55□□□□□ -0.4
UBR3-201ENST00000272793 C20orf144Q9BQM9 153 aa12.55□□□□□ -0.4
UBR3-201ENST00000272793 LY6HO94772 140 aa12.55□□□□□ -0.4
UBR3-201ENST00000272793 SDIM1Q6ZPB5 146 aa12.55□□□□□ -0.4
UBR3-201ENST00000272793 C20orf173Q96LM9 149 aa12.55□□□□□ -0.4
UBR3-201ENST00000272793 SHANK2-AS3Q9BTD1 123 aa12.55□□□□□ -0.4
UBR3-201ENST00000272793 LECT2O14960 151 aa12.55□□□□□ -0.4
UBR3-201ENST00000272793 PCP2Q8IVA1 136 aa12.55□□□□□ -0.4
UBR3-201ENST00000272793 ATP6V0E1O15342 81 aa12.54□□□□□ -0.4
UBR3-201ENST00000272793 SCXQ7RTU7 201 aa12.54□□□□□ -0.4
UBR3-201ENST00000272793 LINC01545Q5VT33 79 aa12.54□□□□□ -0.4
UBR3-201ENST00000272793 PIK3CD-AS1Q5SR53 167 aa12.53□□□□□ -0.4
UBR3-201ENST00000272793 ARTNQ5T4W7 220 aa12.53□□□□□ -0.4
UBR3-201ENST00000272793 ESM1Q9NQ30 184 aa12.53□□□□□ -0.4
UBR3-201ENST00000272793 FOXF2Q12947 444 aa12.53□□□□□ -0.4
UBR3-201ENST00000272793 DAZ2Q13117 558 aaKnown RBP12.53□□□□□ -0.4
UBR3-201ENST00000272793 WFDC2Q14508 124 aa12.53□□□□□ -0.4
UBR3-201ENST00000272793 DAZ4Q86SG3 579 aaKnown RBP12.53□□□□□ -0.4
UBR3-201ENST00000272793 DAZ3Q9NR90 486 aaKnown RBP12.53□□□□□ -0.4
UBR3-201ENST00000272793 IGKV1-12A0A0C4DH73 117 aa12.53□□□□□ -0.4
UBR3-201ENST00000272793 PRR30Q53SZ7 412 aaPredicted RBP12.53□□□□□ -0.4
UBR3-201ENST00000272793 IGKV1-6A0A0C4DH72 117 aa12.52□□□□□ -0.4
UBR3-201ENST00000272793 OOSP1A8MZH6 123 aa12.52□□□□□ -0.4
UBR3-201ENST00000272793 NDUFB8O95169 186 aa12.52□□□□□ -0.4
UBR3-201ENST00000272793 IGKV1-16P04430 117 aa12.52□□□□□ -0.4
UBR3-201ENST00000272793 IFI6P09912 130 aa12.52□□□□□ -0.4
UBR3-201ENST00000272793 COLQQ9Y215 455 aaPredicted RBP12.52□□□□□ -0.4
UBR3-201ENST00000272793 LINC00473A8K010 186 aa12.52□□□□□ -0.41
UBR3-201ENST00000272793 ATP5G1P05496 136 aa12.52□□□□□ -0.41
UBR3-201ENST00000272793 MST1P26927 711 aa12.52□□□□□ -0.41
UBR3-201ENST00000272793 NDUFA1O15239 70 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms