RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 SH3BGRL3Q9H299 93 aa4.49□□□□□ -1.69
TCF4-249ENST00000625716 DNAH1Q9P2D7 4330 aa4.49□□□□□ -1.69
TCF4-249ENST00000625716 IGLV2-18A0A075B6J9 118 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 TRGV11A0A075B6L2 103 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 TRAV26-1A0A087WT03 109 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 TRAV21A0A0B4J279 112 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 A0A0J9YY99 117 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 RNF222A6NCQ9 220 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 ARPC5O15511 151 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 TCL1AP56279 114 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 GNG5P63218 68 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 LGALS9BQ3B8N2 356 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 SOHLH1Q5JUK2 328 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 MUC21Q5SSG8 566 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 PRR9Q5T870 116 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 Q6ZNX1 250 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 LINC00612Q8N6U2 182 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 C5orf17Q8NAS9 161 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 C11orf72Q8NBR9 251 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 TREM1Q9NP99 234 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 NAGKQ9UJ70 344 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 TP53TG3Q9ULZ0 132 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 KLF12Q9Y4X4 402 aa4.48□□□□□ -1.69
TCF4-249ENST00000625716 CTXND1A0A1B0GTU2 59 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 FBLL1A6NHQ2 334 aaKnown RBP4.47□□□□□ -1.69
TCF4-249ENST00000625716 H3BNG1 76 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 SPINK4O60575 86 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 IFNA7P01567 189 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 TCRAP04437 139 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 GYPEP15421 78 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 SLAQ13239 276 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 C21orf62-AS1Q17RA5 79 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 TMEM183BQ1AE95 376 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 ZFP69Q49AA0 526 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 Q6AWC8 147 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 LINC00336Q6ZUF6 198 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 SSX7Q7RTT5 188 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 TMEM183AQ8IXX5 376 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 STOML3Q8TAV4 291 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 KCNS1Q96KK3 526 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 SPXQ9BT56 116 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 MRPL16Q9NX20 251 aaKnown RBP4.47□□□□□ -1.69
TCF4-249ENST00000625716 EPDR1Q9UM22 224 aa4.47□□□□□ -1.69
TCF4-249ENST00000625716 TRAV8-1A0A0A6YYK1 113 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 TRGV4A0A0C4DH28 118 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 A0A0D9SG52 128 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 KANTRA0A1W2PQU2 76 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 A0A1W2PRE2 83 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 F6UZH7 168 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 SMLR1H3BR10 107 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 IGHV3-53P01767 116 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 PPT1P50897 306 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 UBE2G2P60604 165 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 EIF5AP63241 154 aaKnown RBP4.46□□□□□ -1.7
TCF4-249ENST00000625716 FLI1Q01543 452 aaPredicted RBP4.46□□□□□ -1.7
TCF4-249ENST00000625716 SAPCD1Q5SSQ6 148 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 C1orf134Q5TEV5 83 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 Q6ZQT7 251 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 PRNTQ86SH4 94 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 CYB561D1Q8N8Q1 229 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 SUN5Q8TC36 379 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 SGK494Q96LW2 274 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 C18orf15Q96N68 181 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 NKX6-2Q9C056 277 aaPredicted RBP4.46□□□□□ -1.7
TCF4-249ENST00000625716 SDF2L1Q9HCN8 221 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 MDFICQ9P1T7 246 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 PSG8Q9UQ74 426 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 SACSQ9NZJ4 4579 aa4.46□□□□□ -1.7
TCF4-249ENST00000625716 MAP1LC3B2A6NCE7 125 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 PRSS29PA6NIE9 313 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 HMSDA8MTL9 139 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 GNRH2O43555 120 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 PFDN1O60925 122 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 FGF8P55075 233 aaPredicted RBP4.45□□□□□ -1.7
TCF4-249ENST00000625716 FOXI1Q12951 378 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 ZNF345Q14585 488 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 TDRG1Q3Y452 100 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 SMUG1Q53HV7 270 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 KCNRGQ8N5I3 272 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 TMEM75Q8N9X5 138 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 PCNPQ8WW12 178 aaKnown RBP4.45□□□□□ -1.7
TCF4-249ENST00000625716 ZNF471Q9BX82 626 aaPredicted RBP4.45□□□□□ -1.7
TCF4-249ENST00000625716 MAP1LC3BQ9GZQ8 125 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 CYTL1Q9NRR1 136 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 PRO0255Q9UI72 69 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 HHLA3Q9XRX5 114 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 LINC00588Q9Y4M8 146 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 ICOSQ9Y6W8 199 aa4.45□□□□□ -1.7
TCF4-249ENST00000625716 IGHV3-16A0A0C4DH30 117 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 NBDYA0A0U1RRE5 68 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 GGTLC3B5MD39 225 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 UMAD1C9J7I0 102 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 G3V3Q6 166 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 M0R2P5 195 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 GCGP01275 180 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 TYMSP04818 313 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 PFN1P07737 140 aaKnown RBP4.44□□□□□ -1.7
TCF4-249ENST00000625716 UBE2G1P62253 170 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 ZNF726P1Q15940 193 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 MRPL23Q16540 153 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms