RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 UHRF2Q96PU4 802 aa5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 MRPL32Q9BYC8 188 aaKnown RBP5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 SH3BGRL3Q9H299 93 aa5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 RPRMQ9NS64 109 aa5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 UQCR10Q9UDW1 63 aa5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 SLC45A2Q9UMX9 530 aa5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 FRAS1Q86XX4 4008 aa5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 A0A087X0K7 114 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 IGHV3-21A0A0B4J1V1 117 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 IGHV7-4-1A0A0J9YVY3 117 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 GAGE12HA6NDE8 117 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 ZFP92A6NM28 416 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 F8W735 103 aaPredicted RBP5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 J3KT08 172 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 K7EIM0 57 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 MALP21145 153 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 PSMB3P49720 205 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 YPEL3P61236 119 aaPredicted RBP5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 CYP2G1PQ6ZSU1 146 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 FAM24BQ8N5W8 94 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 OR10G7Q8NGN6 311 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 FAM213BQ8TBF2 198 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 NPIPB3Q92617 1050 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 SGK494Q96LW2 274 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 MGST2Q99735 147 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 ANAPC13Q9BS18 74 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 KRTAP17-1Q9BYP8 105 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 RPS10P5Q9NQ39 176 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 CYSLTR1Q9Y271 337 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 PXMP4Q9Y6I8 212 aa5.75□□□□□ -1.49
SEMA3F-209ENST00000493743 TINCRA0A1B0GVN0 87 aa5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 CHEK1O14757 476 aa5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 CTSGP08311 255 aa5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 RPS10P46783 165 aaKnown RBP5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 RND2P52198 227 aa5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 PQLC2Q6ZP29 291 aa5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 NEGR1Q7Z3B1 354 aa5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 C5orf17Q8NAS9 161 aa5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 OR4B1Q8NGF8 309 aa5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 C11orf45Q8TAV5 145 aa5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 RARRES2Q99969 163 aa5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 NDFIP1Q9BT67 221 aa5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 DERL1Q9BUN8 251 aa5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 RHPN1-AS1Q9BWJ2 59 aa5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 C11orf68Q9H3H3 251 aaKnown RBP5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 MANBALQ9NQG1 85 aa5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 PLA2G2EQ9NZK7 142 aa5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 AGRNO00468 2067 aa5.74□□□□□ -1.49
SEMA3F-209ENST00000493743 IGKV3-7A0A075B6H7 116 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 IGKV1OR2-108A0A075B7D4 117 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 A0A087WWC5 75 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 LOC102723971A0A1B0GUV8 181 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 B5MCH6 92 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 USP17L23D6RBM5 183 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 CXorf1O96002 111 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 CRYGDP07320 174 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 LINC00869P0C866 280 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 IGLC1P0CG04 106 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 TFPI2P48307 235 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 NANOS2P60321 138 aaKnown RBP5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 HIST1H1AQ02539 215 aaPredicted RBP5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 BATFQ16520 125 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 ACTL10Q5JWF8 245 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 BAALCQ8WXS3 180 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 ZNF414Q96IQ9 312 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 IMMP2LQ96T52 175 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 C1QTNF4Q9BXJ3 329 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 PPDPFQ9H3Y8 114 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 TMEM167BQ9NRX6 74 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 KMT2AQ03164 3969 aa5.73□□□□□ -1.49
SEMA3F-209ENST00000493743 IGKV1D-37A0A075B6S9 117 aa5.72□□□□□ -1.49
SEMA3F-209ENST00000493743 IGHV3-49A0A0A0MS15 119 aa5.72□□□□□ -1.49
SEMA3F-209ENST00000493743 RBFOX3A6NFN3 312 aa5.72□□□□□ -1.49
SEMA3F-209ENST00000493743 FABP5P3A8MUU1 101 aa5.72□□□□□ -1.49
SEMA3F-209ENST00000493743 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.72□□□□□ -1.49
SEMA3F-209ENST00000493743 HYPMO75409 117 aa5.72□□□□□ -1.49
SEMA3F-209ENST00000493743 MEF2BQ02080 365 aaPredicted RBP5.72□□□□□ -1.49
SEMA3F-209ENST00000493743 ZNF506Q5JVG8 444 aa5.72□□□□□ -1.49
SEMA3F-209ENST00000493743 MIC13Q5XKP0 118 aa5.72□□□□□ -1.49
SEMA3F-209ENST00000493743 FAM90A2PQ658T7 463 aa5.72□□□□□ -1.49
SEMA3F-209ENST00000493743 OR51G1Q8NGK1 321 aa5.72□□□□□ -1.49
SEMA3F-209ENST00000493743 GTSF1LQ9H1H1 148 aa5.72□□□□□ -1.49
SEMA3F-209ENST00000493743 FUT9Q9Y231 359 aa5.72□□□□□ -1.49
SEMA3F-209ENST00000493743 DNAH10Q8IVF4 4471 aa5.72□□□□□ -1.49
SEMA3F-209ENST00000493743 IGHV3OR16-13A0A075B7E8 117 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 A0A087WWL8 130 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 IGHV3-74A0A0B4J1X5 117 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 TMEM250H0YL14 139 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 CRXO43186 299 aaPredicted RBP5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 COX7A2P2O60397 106 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 HIST1H2BKO60814 126 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 CA1P00915 261 aaPredicted RBP5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 IGKV1-17P01599 117 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 HIST1H2BJP06899 126 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 CT45A10P0DMU9 189 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 HIST1H2BOP23527 126 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 HIST1H2BBP33778 126 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 EMP1P54849 157 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 HIST1H2BDP58876 126 aa5.71□□□□□ -1.5
SEMA3F-209ENST00000493743 HIST1H2BCP62807 126 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms