RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 FNDC10F2Z333 226 aa8.44□□□□□ -1.06
CDH1-214ENST00000621016 TIMM23O14925 209 aa8.44□□□□□ -1.06
CDH1-214ENST00000621016 TMEM155Q4W5P6 130 aa8.44□□□□□ -1.06
CDH1-214ENST00000621016 RAX2Q96IS3 184 aa8.44□□□□□ -1.06
CDH1-214ENST00000621016 SHISA9B4DS77 424 aa8.44□□□□□ -1.06
CDH1-214ENST00000621016 LOXL1Q08397 574 aaPredicted RBP8.44□□□□□ -1.06
CDH1-214ENST00000621016 HIGD1AQ9Y241 93 aa8.44□□□□□ -1.06
CDH1-214ENST00000621016 LY96Q9Y6Y9 160 aa8.44□□□□□ -1.06
CDH1-214ENST00000621016 TCF15Q12870 199 aa8.44□□□□□ -1.06
CDH1-214ENST00000621016 PRSS3P2Q8NHM4 247 aa8.44□□□□□ -1.06
CDH1-214ENST00000621016 EDA2RQ9HAV5 297 aa8.44□□□□□ -1.06
CDH1-214ENST00000621016 SMIM9A6NGZ8 99 aa8.43□□□□□ -1.06
CDH1-214ENST00000621016 IL4P05112 153 aa8.43□□□□□ -1.06
CDH1-214ENST00000621016 USP9YO00507 2555 aaPredicted RBP8.43□□□□□ -1.06
CDH1-214ENST00000621016 IGKV2D-26A0A0A0MRZ7 120 aa8.43□□□□□ -1.06
CDH1-214ENST00000621016 CRXO43186 299 aaPredicted RBP8.43□□□□□ -1.06
CDH1-214ENST00000621016 MFAP4P55083 255 aa8.43□□□□□ -1.06
CDH1-214ENST00000621016 SCNM1Q9BWG6 230 aa8.43□□□□□ -1.06
CDH1-214ENST00000621016 SNCGO76070 127 aa8.42□□□□□ -1.06
CDH1-214ENST00000621016 TCRAP04437 139 aa8.42□□□□□ -1.06
CDH1-214ENST00000621016 ASCL5Q7RTU5 278 aa8.42□□□□□ -1.06
CDH1-214ENST00000621016 LINC00574Q9H8X3 128 aa8.42□□□□□ -1.06
CDH1-214ENST00000621016 DKK2Q9UBU2 259 aa8.42□□□□□ -1.06
CDH1-214ENST00000621016 DOPEY2Q9Y3R5 2298 aa8.42□□□□□ -1.06
CDH1-214ENST00000621016 BUB1B-PAK6H3BSN5 160 aa8.42□□□□□ -1.06
CDH1-214ENST00000621016 CCL21O00585 134 aa8.42□□□□□ -1.06
CDH1-214ENST00000621016 RPP21Q9H633 154 aaKnown RBP8.42□□□□□ -1.06
CDH1-214ENST00000621016 POLQO75417 2590 aa8.42□□□□□ -1.06
CDH1-214ENST00000621016 IGHV3-66A0A0C4DH42 116 aa8.42□□□□□ -1.06
CDH1-214ENST00000621016 LINC01545Q5VT33 79 aa8.42□□□□□ -1.06
CDH1-214ENST00000621016 CHCHD5Q9BSY4 110 aa8.42□□□□□ -1.06
CDH1-214ENST00000621016 CHAC1Q9BUX1 264 aa8.42□□□□□ -1.06
CDH1-214ENST00000621016 SLC25A39Q9BZJ4 359 aaPredicted RBP8.42□□□□□ -1.06
CDH1-214ENST00000621016 NOTCH3Q9UM47 2321 aa8.42□□□□□ -1.06
CDH1-214ENST00000621016 CRYBG3Q68DQ2 2970 aa8.41□□□□□ -1.06
CDH1-214ENST00000621016 IGHV3-49A0A0A0MS15 119 aa8.41□□□□□ -1.06
CDH1-214ENST00000621016 TRAV8-2A0A0B4J237 113 aa8.41□□□□□ -1.06
CDH1-214ENST00000621016 NPIPB6E9PJ23 425 aa8.41□□□□□ -1.06
CDH1-214ENST00000621016 IFITM1P13164 125 aa8.41□□□□□ -1.06
CDH1-214ENST00000621016 SMCPP49901 116 aaPredicted RBP8.41□□□□□ -1.06
CDH1-214ENST00000621016 CDSNQ15517 529 aa8.41□□□□□ -1.06
CDH1-214ENST00000621016 RASL11AQ6T310 242 aa8.41□□□□□ -1.06
CDH1-214ENST00000621016 TNFRSF6BO95407 300 aa8.41□□□□□ -1.06
CDH1-214ENST00000621016 HBBP68871 147 aa8.41□□□□□ -1.06
CDH1-214ENST00000621016 MRGPRG-AS1Q2M3A8 158 aa8.41□□□□□ -1.06
CDH1-214ENST00000621016 ZFYVE26Q68DK2 2539 aa8.41□□□□□ -1.06
CDH1-214ENST00000621016 GTSCR1Q86UQ5 136 aa8.41□□□□□ -1.06
CDH1-214ENST00000621016 OR4X2Q8NGF9 303 aa8.41□□□□□ -1.06
CDH1-214ENST00000621016 AP5S1Q9NUS5 200 aa8.41□□□□□ -1.06
CDH1-214ENST00000621016 CARD19Q96LW7 228 aa8.41□□□□□ -1.06
CDH1-214ENST00000621016 ZNF747Q9BV97 191 aa8.41□□□□□ -1.06
CDH1-214ENST00000621016 FAM208BQ5VWN6 2430 aa8.4□□□□□ -1.06
CDH1-214ENST00000621016 NDUFS7O75251 213 aa8.4□□□□□ -1.06
CDH1-214ENST00000621016 ZNF672Q499Z4 452 aaPredicted RBP8.4□□□□□ -1.06
CDH1-214ENST00000621016 ZFP2Q6ZN57 461 aa8.4□□□□□ -1.06
CDH1-214ENST00000621016 MYO18BQ8IUG5 2567 aa8.4□□□□□ -1.06
CDH1-214ENST00000621016 E9PLD3 99 aa8.4□□□□□ -1.07
CDH1-214ENST00000621016 DLX6P56179 175 aa8.4□□□□□ -1.07
CDH1-214ENST00000621016 PIP4P2Q8N4L2 257 aa8.4□□□□□ -1.07
CDH1-214ENST00000621016 MAP1LC3AQ9H492 121 aa8.4□□□□□ -1.07
CDH1-214ENST00000621016 OOSP1A8MZH6 123 aa8.39□□□□□ -1.07
CDH1-214ENST00000621016 FSTL3O95633 263 aa8.39□□□□□ -1.07
CDH1-214ENST00000621016 ARMS2P0C7Q2 107 aa8.39□□□□□ -1.07
CDH1-214ENST00000621016 EMP1P54849 157 aa8.39□□□□□ -1.07
CDH1-214ENST00000621016 ATP5IP56385 69 aaPredicted RBP8.39□□□□□ -1.07
CDH1-214ENST00000621016 KLF5Q13887 457 aaPredicted RBP8.39□□□□□ -1.07
CDH1-214ENST00000621016 FAM19A5Q7Z5A7 132 aaPredicted RBP8.39□□□□□ -1.07
CDH1-214ENST00000621016 PRO0461Q9UI25 63 aa8.39□□□□□ -1.07
CDH1-214ENST00000621016 GP9P14770 177 aa8.39□□□□□ -1.07
CDH1-214ENST00000621016 Q8TAT8 98 aa8.39□□□□□ -1.07
CDH1-214ENST00000621016 ZFHX3Q15911 3703 aa8.39□□□□□ -1.07
CDH1-214ENST00000621016 IGKV1-17P01599 117 aa8.39□□□□□ -1.07
CDH1-214ENST00000621016 C12orf74Q32Q52 190 aa8.39□□□□□ -1.07
CDH1-214ENST00000621016 ZC2HC1BQ5TFG8 222 aa8.39□□□□□ -1.07
CDH1-214ENST00000621016 THAP8Q8NA92 274 aa8.39□□□□□ -1.07
CDH1-214ENST00000621016 OR9G4Q8NGQ1 327 aa8.39□□□□□ -1.07
CDH1-214ENST00000621016 C8orf49Q96NF6 230 aa8.39□□□□□ -1.07
CDH1-214ENST00000621016 HIST1H4GQ99525 98 aa8.39□□□□□ -1.07
CDH1-214ENST00000621016 TEX22C9J3V5 150 aa8.38□□□□□ -1.07
CDH1-214ENST00000621016 OR2J3O76001 311 aa8.38□□□□□ -1.07
CDH1-214ENST00000621016 ACACBO00763 2458 aa8.38□□□□□ -1.07
CDH1-214ENST00000621016 SETD2Q9BYW2 2564 aaPredicted RBP8.38□□□□□ -1.07
CDH1-214ENST00000621016 F5H768 121 aa8.38□□□□□ -1.07
CDH1-214ENST00000621016 IGLV1-47P01700 117 aa8.38□□□□□ -1.07
CDH1-214ENST00000621016 IFI27P40305 119 aaPredicted RBP8.38□□□□□ -1.07
CDH1-214ENST00000621016 TRGV9Q99603 122 aa8.38□□□□□ -1.07
CDH1-214ENST00000621016 TMEM30BQ3MIR4 351 aa8.37□□□□□ -1.07
CDH1-214ENST00000621016 PHLDA1Q8WV24 401 aaPredicted RBP8.37□□□□□ -1.07
CDH1-214ENST00000621016 SIGLEC8Q9NYZ4 499 aa8.37□□□□□ -1.07
CDH1-214ENST00000621016 IGHV3OR16-10A0A075B7F0 116 aa8.37□□□□□ -1.07
CDH1-214ENST00000621016 IGKV2-40A0A087WW87 121 aaPredicted RBP8.37□□□□□ -1.07
CDH1-214ENST00000621016 IGKV2D-40P01614 121 aaPredicted RBP8.37□□□□□ -1.07
CDH1-214ENST00000621016 HLA-DMBP28068 263 aa8.37□□□□□ -1.07
CDH1-214ENST00000621016 RBPMS2Q6ZRY4 209 aaKnown RBP8.37□□□□□ -1.07
CDH1-214ENST00000621016 ZNF502Q8TBZ5 544 aa8.37□□□□□ -1.07
CDH1-214ENST00000621016 NRGNQ92686 78 aa8.37□□□□□ -1.07
CDH1-214ENST00000621016 ZNF414Q96IQ9 312 aa8.37□□□□□ -1.07
CDH1-214ENST00000621016 VPS13CQ709C8 3753 aa8.37□□□□□ -1.07
CDH1-214ENST00000621016 UTP20O75691 2785 aaKnown RBP8.37□□□□□ -1.07
CDH1-214ENST00000621016 TRBV25-1A0A075B6N4 114 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms