RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 DKK2Q9UBU2 259 aa7.63□□□□□ -1.19
ZNF540-205ENST00000587220 YTHDF2Q9Y5A9 579 aaKnown RBP7.63□□□□□ -1.19
ZNF540-205ENST00000587220 A0A1B0GV50 99 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 ZNF727A8MUV8 499 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 FNDC10F2Z333 226 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 M0R2Z0 102 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 PHOX2AO14813 284 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 HIST1H2BKO60814 126 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 HIST1H2BJP06899 126 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 CXCL1P09341 107 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 HIST1H2BOP23527 126 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 HIST1H2BBP33778 126 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 HIST1H2BDP58876 126 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 RHOBP62745 196 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 HIST1H2BCP62807 126 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 HIST2H2BEQ16778 126 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 ACOT6Q3I5F7 207 aaPredicted RBP7.62□□□□□ -1.19
ZNF540-205ENST00000587220 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.62□□□□□ -1.19
ZNF540-205ENST00000587220 UBE2DNLQ8IWF7 75 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 C1orf158Q8N1D5 194 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 HIST1H2BHQ93079 126 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 IMMP2LQ96T52 175 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 HIST1H2BNQ99877 126 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 HIST1H2BMQ99879 126 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 VPS13DQ5THJ4 4388 aa7.62□□□□□ -1.19
ZNF540-205ENST00000587220 TRAV8-2A0A0B4J237 113 aa7.61□□□□□ -1.19
ZNF540-205ENST00000587220 UBE2L5PA0A1B0GUS4 154 aa7.61□□□□□ -1.19
ZNF540-205ENST00000587220 F6UZH7 168 aa7.61□□□□□ -1.19
ZNF540-205ENST00000587220 PDE6DO43924 150 aa7.61□□□□□ -1.19
ZNF540-205ENST00000587220 COX7A2P2O60397 106 aa7.61□□□□□ -1.19
ZNF540-205ENST00000587220 TYMSP04818 313 aa7.61□□□□□ -1.19
ZNF540-205ENST00000587220 FAM3BP58499 235 aaPredicted RBP7.61□□□□□ -1.19
ZNF540-205ENST00000587220 PLP1P60201 277 aa7.61□□□□□ -1.19
ZNF540-205ENST00000587220 DAD1P61803 113 aa7.61□□□□□ -1.19
ZNF540-205ENST00000587220 HIST1H1AQ02539 215 aaPredicted RBP7.61□□□□□ -1.19
ZNF540-205ENST00000587220 RAB31Q13636 194 aa7.61□□□□□ -1.19
ZNF540-205ENST00000587220 LCN15Q6UWW0 184 aa7.61□□□□□ -1.19
ZNF540-205ENST00000587220 AMTNQ6UX39 209 aa7.61□□□□□ -1.19
ZNF540-205ENST00000587220 HIST3H2BBQ8N257 126 aa7.61□□□□□ -1.19
ZNF540-205ENST00000587220 POM121L12Q8N7R1 296 aa7.61□□□□□ -1.19
ZNF540-205ENST00000587220 C17orf77Q96MU5 243 aa7.61□□□□□ -1.19
ZNF540-205ENST00000587220 SMIM7Q9BQ49 75 aa7.61□□□□□ -1.19
ZNF540-205ENST00000587220 WDR83OSQ9Y284 106 aa7.61□□□□□ -1.19
ZNF540-205ENST00000587220 A0A087X0K7 114 aa7.6□□□□□ -1.19
ZNF540-205ENST00000587220 TGIF2-C20orf24A0A0A6YYL0 155 aa7.6□□□□□ -1.19
ZNF540-205ENST00000587220 A8MTW9 85 aa7.6□□□□□ -1.19
ZNF540-205ENST00000587220 LINC00587B1AMM8 73 aa7.6□□□□□ -1.19
ZNF540-205ENST00000587220 PFN1P07737 140 aaKnown RBP7.6□□□□□ -1.19
ZNF540-205ENST00000587220 FGF7P21781 194 aa7.6□□□□□ -1.19
ZNF540-205ENST00000587220 NDUFA6P56556 154 aa7.6□□□□□ -1.19
ZNF540-205ENST00000587220 LINC00305Q7Z4B0 112 aa7.6□□□□□ -1.19
ZNF540-205ENST00000587220 OR10G9Q8NGN4 311 aa7.6□□□□□ -1.19
ZNF540-205ENST00000587220 OR10G7Q8NGN6 311 aa7.6□□□□□ -1.19
ZNF540-205ENST00000587220 NPCDR1Q9BY65 106 aa7.6□□□□□ -1.19
ZNF540-205ENST00000587220 ARL2-SNX15V9GYD0 113 aa7.6□□□□□ -1.19
ZNF540-205ENST00000587220 TRAV12-2A0A075B6T6 113 aa7.59□□□□□ -1.19
ZNF540-205ENST00000587220 TRAV9-1A0A075B6T8 112 aa7.59□□□□□ -1.19
ZNF540-205ENST00000587220 IFITM10A6NMD0 228 aa7.59□□□□□ -1.19
ZNF540-205ENST00000587220 ZNF705GA8MUZ8 300 aaPredicted RBP7.59□□□□□ -1.19
ZNF540-205ENST00000587220 TRGC2P03986 189 aa7.59□□□□□ -1.19
ZNF540-205ENST00000587220 TRGC1P0CF51 173 aa7.59□□□□□ -1.19
ZNF540-205ENST00000587220 HTN1P15515 57 aa7.59□□□□□ -1.19
ZNF540-205ENST00000587220 CEBPGP53567 150 aa7.59□□□□□ -1.19
ZNF540-205ENST00000587220 PSG3Q16557 428 aa7.59□□□□□ -1.19
ZNF540-205ENST00000587220 C10orf113Q5VZT2 155 aa7.59□□□□□ -1.19
ZNF540-205ENST00000587220 SSX7Q7RTT5 188 aa7.59□□□□□ -1.19
ZNF540-205ENST00000587220 BPIFA4PQ86YQ2 179 aa7.59□□□□□ -1.19
ZNF540-205ENST00000587220 TMEM183AQ8IXX5 376 aa7.59□□□□□ -1.19
ZNF540-205ENST00000587220 OR8A1Q8NGG7 326 aa7.59□□□□□ -1.19
ZNF540-205ENST00000587220 RPUSD4Q96CM3 377 aaKnown RBP7.59□□□□□ -1.19
ZNF540-205ENST00000587220 LINC01587Q99440 93 aa7.59□□□□□ -1.19
ZNF540-205ENST00000587220 PFDN5Q99471 154 aa7.59□□□□□ -1.19
ZNF540-205ENST00000587220 H7BYZ3 331 aa7.58□□□□□ -1.2
ZNF540-205ENST00000587220 M0R2N4 97 aa7.58□□□□□ -1.2
ZNF540-205ENST00000587220 DEFB130BP0DP73 79 aa7.58□□□□□ -1.2
ZNF540-205ENST00000587220 DEFB130AP0DP74 79 aa7.58□□□□□ -1.2
ZNF540-205ENST00000587220 CDC34P49427 236 aaPredicted RBP7.58□□□□□ -1.2
ZNF540-205ENST00000587220 RPL23P62829 140 aaKnown RBP7.58□□□□□ -1.2
ZNF540-205ENST00000587220 PYY3Q5JQD4 70 aa7.58□□□□□ -1.2
ZNF540-205ENST00000587220 FFAR4Q5NUL3 377 aa7.58□□□□□ -1.2
ZNF540-205ENST00000587220 KCNIP4Q6PIL6 250 aa7.58□□□□□ -1.2
ZNF540-205ENST00000587220 PATE2Q6UY27 113 aa7.58□□□□□ -1.2
ZNF540-205ENST00000587220 LINC00336Q6ZUF6 198 aa7.58□□□□□ -1.2
ZNF540-205ENST00000587220 TMEM256Q8N2U0 113 aa7.58□□□□□ -1.2
ZNF540-205ENST00000587220 FRZBQ92765 325 aa7.58□□□□□ -1.2
ZNF540-205ENST00000587220 RAB24Q969Q5 203 aa7.58□□□□□ -1.2
ZNF540-205ENST00000587220 SLC50A1Q9BRV3 221 aa7.58□□□□□ -1.2
ZNF540-205ENST00000587220 PARLQ9H300 379 aa7.58□□□□□ -1.2
ZNF540-205ENST00000587220 DNAH10Q8IVF4 4471 aa7.58□□□□□ -1.2
ZNF540-205ENST00000587220 LYRM9A8MSI8 78 aa7.57□□□□□ -1.2
ZNF540-205ENST00000587220 CRXO43186 299 aaPredicted RBP7.57□□□□□ -1.2
ZNF540-205ENST00000587220 PRM2P04554 102 aa7.57□□□□□ -1.2
ZNF540-205ENST00000587220 SNRPCP09234 159 aaKnown RBP7.57□□□□□ -1.2
ZNF540-205ENST00000587220 FGF8P55075 233 aaPredicted RBP7.57□□□□□ -1.2
ZNF540-205ENST00000587220 PKIAP61925 76 aa7.57□□□□□ -1.2
ZNF540-205ENST00000587220 ADIRFQ15847 76 aa7.57□□□□□ -1.2
ZNF540-205ENST00000587220 LBHQ53QV2 105 aaPredicted RBP7.57□□□□□ -1.2
ZNF540-205ENST00000587220 OR10J6PQ8NGY7 276 aa7.57□□□□□ -1.2
ZNF540-205ENST00000587220 MGST2Q99735 147 aa7.57□□□□□ -1.2
ZNF540-205ENST00000587220 LY96Q9Y6Y9 160 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms