RNA–Protein interactions for RNA: ENST00000480750.3

SRGAP3-206, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-206ENST00000480750 FAM3BP58499 235 aaPredicted RBP6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 PSG3Q16557 428 aa6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 SPINK13Q1W4C9 94 aa6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 C12orf74Q32Q52 190 aa6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 HIST3H2BBQ8N257 126 aa6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 OR1L4Q8NGR5 311 aa6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 RAB24Q969Q5 203 aa6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 ANAPC16Q96DE5 110 aa6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 FAM210BQ96KR6 192 aa6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 IGF2BP2-AS1Q96M15 143 aa6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 TXNDC17Q9BRA2 123 aa6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 PYGO2Q9BRQ0 406 aa6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 SLC50A1Q9BRV3 221 aa6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 MANBALQ9NQG1 85 aa6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 NAT8Q9UHE5 227 aa6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 BIRC6Q9NR09 4857 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 HIST1H2BKO60814 126 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 GCGP01275 180 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 HIST1H2BJP06899 126 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 HTN3P15516 51 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 FGF7P21781 194 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 HIST1H2BOP23527 126 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 HIST1H2BBP33778 126 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 HIST1H2BDP58876 126 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 HIST1H2BCP62807 126 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 HIST2H2BEQ16778 126 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 ACOT6Q3I5F7 207 aaPredicted RBP6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 FAM222AQ5U5X8 452 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 MORN5Q5VZ52 161 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 MIC13Q5XKP0 118 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 C1orf158Q8N1D5 194 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 RPP25LQ8N5L8 163 aaKnown RBP6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 CYB561D1Q8N8Q1 229 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 OR8A1Q8NGG7 326 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 HIST1H2BHQ93079 126 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 RPUSD4Q96CM3 377 aaKnown RBP6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 HIST1H2BNQ99877 126 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 HIST1H2BMQ99879 126 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 NDUFAF3Q9BU61 184 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 ACTR3CQ9C0K3 210 aaPredicted RBP6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 SDF2L1Q9HCN8 221 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 DNAJC4Q9NNZ3 241 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 APLNQ9ULZ1 77 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 DNAH10Q8IVF4 4471 aa6.54□□□□□ -1.36
SRGAP3-206ENST00000480750 TRAV12-2A0A075B6T6 113 aa6.53□□□□□ -1.36
SRGAP3-206ENST00000480750 TRAV5A0A0B4J249 113 aa6.53□□□□□ -1.36
SRGAP3-206ENST00000480750 TYMSP04818 313 aa6.53□□□□□ -1.36
SRGAP3-206ENST00000480750 AKR1C3P42330 323 aa6.53□□□□□ -1.36
SRGAP3-206ENST00000480750 FHITP49789 147 aa6.53□□□□□ -1.36
SRGAP3-206ENST00000480750 NDUFA6P56556 154 aa6.53□□□□□ -1.36
SRGAP3-206ENST00000480750 DAD1P61803 113 aa6.53□□□□□ -1.36
SRGAP3-206ENST00000480750 PYY3Q5JQD4 70 aa6.53□□□□□ -1.36
SRGAP3-206ENST00000480750 TMEM183AQ8IXX5 376 aa6.53□□□□□ -1.36
SRGAP3-206ENST00000480750 OR10J6PQ8NGY7 276 aa6.53□□□□□ -1.36
SRGAP3-206ENST00000480750 TMEM37Q8WXS4 190 aa6.53□□□□□ -1.36
SRGAP3-206ENST00000480750 IMMP2LQ96T52 175 aa6.53□□□□□ -1.36
SRGAP3-206ENST00000480750 LINC01587Q99440 93 aa6.53□□□□□ -1.36
SRGAP3-206ENST00000480750 WDR83OSQ9Y284 106 aa6.53□□□□□ -1.36
SRGAP3-206ENST00000480750 YTHDF2Q9Y5A9 579 aaKnown RBP6.53□□□□□ -1.36
SRGAP3-206ENST00000480750 PXMP4Q9Y6I8 212 aa6.53□□□□□ -1.36
SRGAP3-206ENST00000480750 TRAV9-1A0A075B6T8 112 aa6.52□□□□□ -1.37
SRGAP3-206ENST00000480750 A8MTW9 85 aa6.52□□□□□ -1.37
SRGAP3-206ENST00000480750 ZNF705GA8MUZ8 300 aaPredicted RBP6.52□□□□□ -1.37
SRGAP3-206ENST00000480750 MPDU1O75352 247 aa6.52□□□□□ -1.37
SRGAP3-206ENST00000480750 HTN1P15515 57 aa6.52□□□□□ -1.37
SRGAP3-206ENST00000480750 RPL29P47914 159 aaKnown RBP6.52□□□□□ -1.37
SRGAP3-206ENST00000480750 JOSD1Q15040 202 aaPredicted RBP6.52□□□□□ -1.37
SRGAP3-206ENST00000480750 AMTNQ6UX39 209 aa6.52□□□□□ -1.37
SRGAP3-206ENST00000480750 UBE2DNLQ8IWF7 75 aa6.52□□□□□ -1.37
SRGAP3-206ENST00000480750 C2orf88Q9BSF0 95 aa6.52□□□□□ -1.37
SRGAP3-206ENST00000480750 ZNF331Q9NQX6 463 aaPredicted RBP6.52□□□□□ -1.37
SRGAP3-206ENST00000480750 SLC39A9Q9NUM3 307 aa6.52□□□□□ -1.37
SRGAP3-206ENST00000480750 DKK2Q9UBU2 259 aa6.52□□□□□ -1.37
SRGAP3-206ENST00000480750 CTXND1A0A1B0GTU2 59 aa6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 C17orf112F2Z3M2 114 aa6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 MRPS12O15235 138 aaKnown RBP6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 TRGC1P0CF51 173 aa6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 P0DMU3 169 aa6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 FAM231AP0DMU4 169 aa6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 FAM231CP0DMU5 169 aa6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 DDTP30046 118 aa6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 TSPOP30536 169 aa6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 CDKN1BP46527 198 aa6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 SMCPP49901 116 aaPredicted RBP6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 MEF2BQ02080 365 aaPredicted RBP6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 TMEM241Q24JQ0 296 aa6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 VWC2Q2TAL6 325 aa6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 KCNIP4Q6PIL6 250 aa6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 TMEM256Q8N2U0 113 aa6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 OR10D4PQ8NGN7 298 aa6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 PACRGQ96M98 296 aaPredicted RBP6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 KCNIP2Q9NS61 270 aa6.51□□□□□ -1.37
SRGAP3-206ENST00000480750 MAP1LC3B2A6NCE7 125 aa6.5□□□□□ -1.37
SRGAP3-206ENST00000480750 IFITM10A6NMD0 228 aa6.5□□□□□ -1.37
SRGAP3-206ENST00000480750 ZNF727A8MUV8 499 aa6.5□□□□□ -1.37
SRGAP3-206ENST00000480750 PRAC2D3DTV9 90 aa6.5□□□□□ -1.37
SRGAP3-206ENST00000480750 J3KRW8 73 aa6.5□□□□□ -1.37
SRGAP3-206ENST00000480750 SLC17A3O00476 420 aa6.5□□□□□ -1.37
SRGAP3-206ENST00000480750 PHOX2AO14813 284 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms