RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 FOXI2Q6ZQN5 318 aa13.29□□□□□ -0.28
USP13-201ENST00000263966 C16orf74Q96GX8 76 aa13.29□□□□□ -0.28
USP13-201ENST00000263966 GP9P14770 177 aa13.29□□□□□ -0.28
USP13-201ENST00000263966 LYPD2Q6UXB3 125 aa13.29□□□□□ -0.28
USP13-201ENST00000263966 A0A1W2PPI3 338 aa13.28□□□□□ -0.28
USP13-201ENST00000263966 PYGO2Q9BRQ0 406 aa13.28□□□□□ -0.28
USP13-201ENST00000263966 MRPL53Q96EL3 112 aaKnown RBP13.28□□□□□ -0.28
USP13-201ENST00000263966 WISP1O95388 367 aa13.28□□□□□ -0.28
USP13-201ENST00000263966 YPEL3P61236 119 aaPredicted RBP13.28□□□□□ -0.28
USP13-201ENST00000263966 C5orf47Q569G3 176 aa13.28□□□□□ -0.28
USP13-201ENST00000263966 CAMK2N2Q96S95 79 aa13.28□□□□□ -0.28
USP13-201ENST00000263966 LY96Q9Y6Y9 160 aa13.28□□□□□ -0.28
USP13-201ENST00000263966 C9orf47Q6ZRZ4 202 aa13.27□□□□□ -0.29
USP13-201ENST00000263966 A0A0J9YY99 117 aa13.27□□□□□ -0.29
USP13-201ENST00000263966 AMN1Q8IY45 258 aa13.27□□□□□ -0.29
USP13-201ENST00000263966 HS3ST6Q96QI5 342 aa13.27□□□□□ -0.29
USP13-201ENST00000263966 PCNX3Q9H6A9 2034 aa13.27□□□□□ -0.29
USP13-201ENST00000263966 SHISA9B4DS77 424 aa13.26□□□□□ -0.29
USP13-201ENST00000263966 SPANXCQ9NY87 97 aa13.26□□□□□ -0.29
USP13-201ENST00000263966 TRAV12-2A0A075B6T6 113 aa13.26□□□□□ -0.29
USP13-201ENST00000263966 CRYGCP07315 174 aa13.26□□□□□ -0.29
USP13-201ENST00000263966 PIFOQ8TCI5 191 aa13.26□□□□□ -0.29
USP13-201ENST00000263966 IGKV1D-12P01611 117 aa13.26□□□□□ -0.29
USP13-201ENST00000263966 RNF183Q96D59 192 aa13.26□□□□□ -0.29
USP13-201ENST00000263966 C9JQL5 133 aa13.26□□□□□ -0.29
USP13-201ENST00000263966 TGFBR3LH3BV60 316 aa13.25□□□□□ -0.29
USP13-201ENST00000263966 A0A0A6YYD4 124 aa13.25□□□□□ -0.29
USP13-201ENST00000263966 SDHAF1A6NFY7 115 aa13.25□□□□□ -0.29
USP13-201ENST00000263966 FGF16O43320 207 aa13.25□□□□□ -0.29
USP13-201ENST00000263966 TCF15Q12870 199 aa13.25□□□□□ -0.29
USP13-201ENST00000263966 SYS1-DBNDD2H3BUS1 97 aa13.25□□□□□ -0.29
USP13-201ENST00000263966 ZC2HC1BQ5TFG8 222 aa13.25□□□□□ -0.29
USP13-201ENST00000263966 ORMDL1Q9P0S3 153 aa13.25□□□□□ -0.29
USP13-201ENST00000263966 SMKR1H3BMG3 65 aa13.24□□□□□ -0.29
USP13-201ENST00000263966 K7ERS5 55 aa13.24□□□□□ -0.29
USP13-201ENST00000263966 C1QCP02747 245 aa13.24□□□□□ -0.29
USP13-201ENST00000263966 CITED1Q99966 193 aa13.24□□□□□ -0.29
USP13-201ENST00000263966 PRB4P10163 310 aaPredicted RBP13.24□□□□□ -0.29
USP13-201ENST00000263966 IGHV7-4-1A0A0J9YVY3 117 aa13.24□□□□□ -0.29
USP13-201ENST00000263966 DAZ2Q13117 558 aaKnown RBP13.24□□□□□ -0.29
USP13-201ENST00000263966 DAZ4Q86SG3 579 aaKnown RBP13.24□□□□□ -0.29
USP13-201ENST00000263966 DAZ3Q9NR90 486 aaKnown RBP13.24□□□□□ -0.29
USP13-201ENST00000263966 PRSS46E5RG02 174 aa13.24□□□□□ -0.29
USP13-201ENST00000263966 B9D2Q9BPU9 175 aa13.24□□□□□ -0.29
USP13-201ENST00000263966 C14orf132Q9NPU4 83 aa13.24□□□□□ -0.29
USP13-201ENST00000263966 KIR3DS1Q14943 382 aa13.24□□□□□ -0.29
USP13-201ENST00000263966 IGHV3-38A0A0C4DH36 116 aa13.24□□□□□ -0.29
USP13-201ENST00000263966 HERV-K104P63124 156 aa13.24□□□□□ -0.29
USP13-201ENST00000263966 BDP1A6H8Y1 2624 aa13.24□□□□□ -0.29
USP13-201ENST00000263966 ACACBO00763 2458 aa13.23□□□□□ -0.29
USP13-201ENST00000263966 hDV102S1A0JD36 115 aa13.23□□□□□ -0.29
USP13-201ENST00000263966 Q6ZQT7 251 aa13.23□□□□□ -0.29
USP13-201ENST00000263966 Q86TA4 180 aa13.23□□□□□ -0.29
USP13-201ENST00000263966 SLC25A29Q8N8R3 303 aa13.23□□□□□ -0.29
USP13-201ENST00000263966 SPINK8P0C7L1 97 aa13.23□□□□□ -0.29
USP13-201ENST00000263966 VSIRQ9H7M9 311 aa13.23□□□□□ -0.29
USP13-201ENST00000263966 NMSQ5H8A3 153 aa13.23□□□□□ -0.29
USP13-201ENST00000263966 MRPL52Q86TS9 123 aaKnown RBP13.23□□□□□ -0.29
USP13-201ENST00000263966 BOD1L2Q8IYS8 172 aa13.23□□□□□ -0.29
USP13-201ENST00000263966 TRBV6-6A0A0A6YYG2 114 aa13.22□□□□□ -0.29
USP13-201ENST00000263966 COX7A2LO14548 114 aa13.22□□□□□ -0.29
USP13-201ENST00000263966 IGFL3Q6UXB1 125 aa13.22□□□□□ -0.29
USP13-201ENST00000263966 IGKV1D-17A0A075B6S4 117 aa13.22□□□□□ -0.29
USP13-201ENST00000263966 C5orf24Q7Z6I8 188 aa13.22□□□□□ -0.29
USP13-201ENST00000263966 GLRX5Q86SX6 157 aa13.22□□□□□ -0.29
USP13-201ENST00000263966 IGFL4Q6B9Z1 124 aa13.22□□□□□ -0.29
USP13-201ENST00000263966 NDUFA12Q9UI09 145 aa13.22□□□□□ -0.29
USP13-201ENST00000263966 TRAV1-1A0A0B4J248 108 aa13.22□□□□□ -0.29
USP13-201ENST00000263966 F6UB75 175 aa13.22□□□□□ -0.29
USP13-201ENST00000263966 C17orf77Q96MU5 243 aa13.22□□□□□ -0.29
USP13-201ENST00000263966 A0A087X0K7 114 aa13.22□□□□□ -0.29
USP13-201ENST00000263966 GYPEP15421 78 aa13.22□□□□□ -0.29
USP13-201ENST00000263966 SMAD5-AS1Q9Y6J3 95 aa13.21□□□□□ -0.29
USP13-201ENST00000263966 FGFBP3Q8TAT2 258 aa13.21□□□□□ -0.29
USP13-201ENST00000263966 C8orf49Q96NF6 230 aa13.21□□□□□ -0.29
USP13-201ENST00000263966 IGKV1-9A0A0C4DH69 117 aa13.21□□□□□ -0.29
USP13-201ENST00000263966 PROP1O75360 226 aa13.21□□□□□ -0.3
USP13-201ENST00000263966 RBM3P98179 157 aaKnown RBP13.21□□□□□ -0.3
USP13-201ENST00000263966 C2orf66Q6UXQ4 117 aa13.21□□□□□ -0.3
USP13-201ENST00000263966 CASC2Q6XLA1 102 aa13.21□□□□□ -0.3
USP13-201ENST00000263966 GPHB5Q86YW7 130 aa13.2□□□□□ -0.3
USP13-201ENST00000263966 IGLV2-23P01705 113 aa13.2□□□□□ -0.3
USP13-201ENST00000263966 FOXE3Q13461 319 aa13.2□□□□□ -0.3
USP13-201ENST00000263966 SEM1Q6ZVN7 128 aa13.2□□□□□ -0.3
USP13-201ENST00000263966 IGHG2P01859 326 aa13.2□□□□□ -0.3
USP13-201ENST00000263966 ATP5G1P05496 136 aa13.2□□□□□ -0.3
USP13-201ENST00000263966 FGF6P10767 208 aa13.2□□□□□ -0.3
USP13-201ENST00000263966 RAI1Q7Z5J4 1906 aaPredicted RBP13.2□□□□□ -0.3
USP13-201ENST00000263966 PRR30Q53SZ7 412 aaPredicted RBP13.2□□□□□ -0.3
USP13-201ENST00000263966 MORN5Q5VZ52 161 aa13.2□□□□□ -0.3
USP13-201ENST00000263966 TRAV3A0A0B4J244 114 aa13.2□□□□□ -0.3
USP13-201ENST00000263966 IGKV1-16P04430 117 aa13.2□□□□□ -0.3
USP13-201ENST00000263966 Q8N8P6 123 aa13.2□□□□□ -0.3
USP13-201ENST00000263966 RNF126Q9BV68 326 aa13.2□□□□□ -0.3
USP13-201ENST00000263966 MST1P26927 711 aa13.19□□□□□ -0.3
USP13-201ENST00000263966 TBX6O95947 436 aaPredicted RBP13.19□□□□□ -0.3
USP13-201ENST00000263966 MPZP25189 248 aa13.19□□□□□ -0.3
USP13-201ENST00000263966 A0A1B0GX51 115 aa13.19□□□□□ -0.3
USP13-201ENST00000263966 LTBP1Q14766 1721 aa13.19□□□□□ -0.3
USP13-201ENST00000263966 U3KQE9 123 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms