RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 PGPA6NDG6 321 aa12.94□□□□□ -0.34
TRAPPC3-209ENST00000616395 APOC4P55056 127 aa12.94□□□□□ -0.34
TRAPPC3-209ENST00000616395 TAS2R60P59551 318 aa12.94□□□□□ -0.34
TRAPPC3-209ENST00000616395 LEMD1Q68G75 181 aa12.94□□□□□ -0.34
TRAPPC3-209ENST00000616395 CTDSP1Q9GZU7 261 aa12.94□□□□□ -0.34
TRAPPC3-209ENST00000616395 ZFAND3Q9H8U3 227 aa12.94□□□□□ -0.34
TRAPPC3-209ENST00000616395 SDF2L1Q9HCN8 221 aa12.94□□□□□ -0.34
TRAPPC3-209ENST00000616395 LY96Q9Y6Y9 160 aa12.94□□□□□ -0.34
TRAPPC3-209ENST00000616395 A0A087WWC5 75 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 SERTM2A0A1B0GWG4 89 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 SCO2A0A1W2PP80 73 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 C7orf77A4D0Y5 90 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 C9JCJ5 164 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 PPP1R2P9O14990 202 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 ZNF253O75346 499 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 CBLN1P23435 193 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 CRYBB3P26998 211 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 GNG4P50150 75 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 ADIRFQ15847 76 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 TM4SF20Q53R12 229 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 UNQ9165/PRO28630Q6UXU0 137 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 ARL6IP6Q8N6S5 226 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 RNF183Q96D59 192 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 Q9H3A6 140 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 BIN3Q9NQY0 253 aa12.93□□□□□ -0.34
TRAPPC3-209ENST00000616395 TRBV19A0A075B6N1 114 aa12.92□□□□□ -0.34
TRAPPC3-209ENST00000616395 ZNF320A2RRD8 509 aa12.92□□□□□ -0.34
TRAPPC3-209ENST00000616395 GGTLC3B5MD39 225 aa12.92□□□□□ -0.34
TRAPPC3-209ENST00000616395 K7EMT4 169 aa12.92□□□□□ -0.34
TRAPPC3-209ENST00000616395 NANOS2P60321 138 aaKnown RBP12.92□□□□□ -0.34
TRAPPC3-209ENST00000616395 BTN1A1Q13410 526 aa12.92□□□□□ -0.34
TRAPPC3-209ENST00000616395 GPHB5Q86YW7 130 aa12.92□□□□□ -0.34
TRAPPC3-209ENST00000616395 SLC50A1Q9BRV3 221 aa12.92□□□□□ -0.34
TRAPPC3-209ENST00000616395 MLXQ9UH92 298 aa12.92□□□□□ -0.34
TRAPPC3-209ENST00000616395 EPDR1Q9UM22 224 aa12.92□□□□□ -0.34
TRAPPC3-209ENST00000616395 DNAH11Q96DT5 4516 aa12.92□□□□□ -0.34
TRAPPC3-209ENST00000616395 IGHV3OR16-8A0A075B7F1 116 aa12.91□□□□□ -0.34
TRAPPC3-209ENST00000616395 TMEM213A2RRL7 107 aa12.91□□□□□ -0.34
TRAPPC3-209ENST00000616395 FBLL1A6NHQ2 334 aaKnown RBP12.91□□□□□ -0.34
TRAPPC3-209ENST00000616395 PEX7O00628 323 aa12.91□□□□□ -0.34
TRAPPC3-209ENST00000616395 UBE2CO00762 179 aa12.91□□□□□ -0.34
TRAPPC3-209ENST00000616395 IGLC2P0DOY2 106 aa12.91□□□□□ -0.34
TRAPPC3-209ENST00000616395 SAMD13Q5VXD3 122 aa12.91□□□□□ -0.34
TRAPPC3-209ENST00000616395 ANAPC16Q96DE5 110 aa12.91□□□□□ -0.34
TRAPPC3-209ENST00000616395 ATG101Q9BSB4 218 aa12.91□□□□□ -0.34
TRAPPC3-209ENST00000616395 BUB3O43684 328 aa12.9□□□□□ -0.34
TRAPPC3-209ENST00000616395 C2CD4CQ8TF44 421 aa12.9□□□□□ -0.34
TRAPPC3-209ENST00000616395 SMIM12Q96EX1 92 aa12.9□□□□□ -0.34
TRAPPC3-209ENST00000616395 FMC1Q96HJ9 113 aa12.9□□□□□ -0.34
TRAPPC3-209ENST00000616395 ZNF414Q96IQ9 312 aa12.9□□□□□ -0.34
TRAPPC3-209ENST00000616395 DAZ1Q9NQZ3 744 aaKnown RBP12.9□□□□□ -0.34
TRAPPC3-209ENST00000616395 TMEM242Q9NWH2 141 aa12.9□□□□□ -0.34
TRAPPC3-209ENST00000616395 ZNF586Q9NXT0 402 aa12.9□□□□□ -0.34
TRAPPC3-209ENST00000616395 DNAH17Q9UFH2 4485 aa12.9□□□□□ -0.34
TRAPPC3-209ENST00000616395 A0A087X0K7 114 aa12.89□□□□□ -0.35
TRAPPC3-209ENST00000616395 PRSS29PA6NIE9 313 aa12.89□□□□□ -0.35
TRAPPC3-209ENST00000616395 LGALS9O00182 355 aa12.89□□□□□ -0.35
TRAPPC3-209ENST00000616395 SCO1O75880 301 aa12.89□□□□□ -0.35
TRAPPC3-209ENST00000616395 S100PP25815 95 aa12.89□□□□□ -0.35
TRAPPC3-209ENST00000616395 RPL35P42766 123 aaKnown RBP12.89□□□□□ -0.35
TRAPPC3-209ENST00000616395 TCTAP57738 103 aa12.89□□□□□ -0.35
TRAPPC3-209ENST00000616395 RPL23P62829 140 aaKnown RBP12.88□□□□□ -0.35
TRAPPC3-209ENST00000616395 ATRAIDQ6UW56 229 aa12.88□□□□□ -0.35
TRAPPC3-209ENST00000616395 C15orf54Q8N8G6 183 aa12.88□□□□□ -0.35
TRAPPC3-209ENST00000616395 C11orf45Q8TAV5 145 aa12.88□□□□□ -0.35
TRAPPC3-209ENST00000616395 BTF3L4Q96K17 158 aa12.88□□□□□ -0.35
TRAPPC3-209ENST00000616395 APLNQ9ULZ1 77 aa12.88□□□□□ -0.35
TRAPPC3-209ENST00000616395 PKD1P98161 4303 aa12.88□□□□□ -0.35
TRAPPC3-209ENST00000616395 A8MWP6 167 aa12.88□□□□□ -0.35
TRAPPC3-209ENST00000616395 ZNF207O43670 478 aaKnown RBP12.88□□□□□ -0.35
TRAPPC3-209ENST00000616395 RPL19P84098 196 aaKnown RBP12.88□□□□□ -0.35
TRAPPC3-209ENST00000616395 SIGLEC15Q6ZMC9 328 aa12.88□□□□□ -0.35
TRAPPC3-209ENST00000616395 RPH3ALQ9UNE2 315 aa12.88□□□□□ -0.35
TRAPPC3-209ENST00000616395 U3KQE9 123 aa12.88□□□□□ -0.35
TRAPPC3-209ENST00000616395 KIR2DL5BA0A0G2JN68 375 aa12.87□□□□□ -0.35
TRAPPC3-209ENST00000616395 KIR2DL5BA0A0G2JPC4 375 aa12.87□□□□□ -0.35
TRAPPC3-209ENST00000616395 H7BYZ3 331 aa12.87□□□□□ -0.35
TRAPPC3-209ENST00000616395 TSPAN4O14817 238 aa12.87□□□□□ -0.35
TRAPPC3-209ENST00000616395 MRPS12O15235 138 aaKnown RBP12.87□□□□□ -0.35
TRAPPC3-209ENST00000616395 TCRAP04437 139 aa12.87□□□□□ -0.35
TRAPPC3-209ENST00000616395 TMEM183BQ1AE95 376 aa12.87□□□□□ -0.35
TRAPPC3-209ENST00000616395 CENPWQ5EE01 88 aa12.87□□□□□ -0.35
TRAPPC3-209ENST00000616395 KCNIP4Q6PIL6 250 aa12.87□□□□□ -0.35
TRAPPC3-209ENST00000616395 C16orf54Q6UWD8 224 aa12.87□□□□□ -0.35
TRAPPC3-209ENST00000616395 KIR2DL5AQ8N109 375 aa12.87□□□□□ -0.35
TRAPPC3-209ENST00000616395 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC3-209ENST00000616395 KIR2DL5BQ8NHK3 375 aa12.87□□□□□ -0.35
TRAPPC3-209ENST00000616395 IGHV7-4-1A0A0J9YVY3 117 aa12.86□□□□□ -0.35
TRAPPC3-209ENST00000616395 IGLL5B9A064 214 aa12.86□□□□□ -0.35
TRAPPC3-209ENST00000616395 RTL8CO15255 209 aa12.86□□□□□ -0.35
TRAPPC3-209ENST00000616395 LINC01551Q86U37 167 aa12.86□□□□□ -0.35
TRAPPC3-209ENST00000616395 BAGE2Q86Y30 109 aa12.86□□□□□ -0.35
TRAPPC3-209ENST00000616395 HERC1Q15751 4861 aa12.85□□□□□ -0.35
TRAPPC3-209ENST00000616395 H3BTX0 84 aa12.85□□□□□ -0.35
TRAPPC3-209ENST00000616395 RPL35AP18077 110 aaKnown RBP12.85□□□□□ -0.35
TRAPPC3-209ENST00000616395 DERL1Q9BUN8 251 aa12.85□□□□□ -0.35
TRAPPC3-209ENST00000616395 HSPG2P98160 4391 aa12.84□□□□□ -0.35
TRAPPC3-209ENST00000616395 TRBV6-1A0A0K0K1D8 114 aa12.84□□□□□ -0.35
TRAPPC3-209ENST00000616395 DNASE2O00115 360 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC3-209ENST00000616395 SNRPCP09234 159 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms