RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 ZNF833PQ6ZTB9 187 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 MED12LQ86YW9 2145 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 TCTE3Q8IZS6 198 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 C5orf17Q8NAS9 161 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 OR10AG1Q8NH19 301 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 PATE1Q8WXA2 126 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 CLEC2BQ92478 149 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 SMIM7Q9BQ49 75 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 JPT1Q9UK76 154 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 HIGD1AQ9Y241 93 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 N4BP2Q86UW6 1770 aaPredicted RBP0.54□□□□□ -2.32
MDM2-227ENST00000540709 KDM6AO15550 1401 aaPredicted RBP0.54□□□□□ -2.32
MDM2-227ENST00000540709 TNS3Q68CZ2 1445 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 TRAPPC8Q9Y2L5 1435 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 NUP98P52948 1817 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 NUP210LQ5VU65 1888 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.53□□□□□ -2.32
MDM2-227ENST00000540709 A0A087WSZ3 146 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 LOC110117498A0A087WWA1 95 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 IGLV3-32A0A0A0MS00 114 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 BORCS7-ASMTA0A0B4J1R7 106 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 IGHV1-24A0A0C4DH33 117 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 TRBV7-6A0A0J9YX20 115 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 J3QR89 54 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 M0R2Z0 102 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 NCR3O14931 201 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 UQCRQO14949 82 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 INE1O15225 51 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 EDF1O60869 148 aaKnown RBP0.53□□□□□ -2.32
MDM2-227ENST00000540709 SULT1C4O75897 302 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 TNFSF15O95150 251 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 OR2H2O95918 312 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 HBDP02042 147 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 TCRAP04437 139 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 SLC25A5P05141 298 aaKnown RBP0.53□□□□□ -2.32
MDM2-227ENST00000540709 SAA1P0DJI8 122 aaPredicted RBP0.53□□□□□ -2.32
MDM2-227ENST00000540709 SLC25A4P12235 298 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 HIST1H1BP16401 226 aaKnown RBP0.53□□□□□ -2.32
MDM2-227ENST00000540709 ETV6P41212 452 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 PSG9Q00887 426 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 HAGHLQ6PII5 290 aaPredicted RBP0.53□□□□□ -2.32
MDM2-227ENST00000540709 LINC00322Q6ZN03 302 aaPredicted RBP0.53□□□□□ -2.32
MDM2-227ENST00000540709 FOXI2Q6ZQN5 318 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 OR5A2Q8NGI9 324 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 DIRC1Q969H9 104 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 NABP2Q9BQ15 211 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 SMIM3Q9BZL3 60 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 BANF2Q9H503 90 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 HSPB8Q9UJY1 196 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 BOKQ9UMX3 212 aaPredicted RBP0.53□□□□□ -2.32
MDM2-227ENST00000540709 DENND4CQ5VZ89 1909 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 EML6Q6ZMW3 1958 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 SCN3AQ9NY46 2000 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 OVOS2A0A0G2JMS6 1433 aa0.53□□□□□ -2.32
MDM2-227ENST00000540709 DLC1Q96QB1 1528 aa0.53□□□□□ -2.33
MDM2-227ENST00000540709 LAMB4A4D0S4 1761 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 SBF1O95248 1867 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 ARFGEF3Q5TH69 2177 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 ALPK2Q86TB3 2170 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 A0A1B0GW64 132 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 A0A1B0GX51 115 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 A0A1W2PPB8 328 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 A0A1W2PRS3 328 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 KIR3DP1A8MWS1 328 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 JMJD7-PLA2G4BH0Y9G9 81 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 K7ERU9 68 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 M0R2N4 97 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 COX4I1P13073 169 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 IL7P13232 177 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 KDELR1P24390 212 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 ARPC4P59998 168 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 SNRPD3P62318 126 aaKnown RBP0.52□□□□□ -2.33
MDM2-227ENST00000540709 IQCJQ1A5X6 159 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 SPATA45Q537H7 98 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 OCIAD2Q56VL3 154 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 IDO2Q6ZQW0 420 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 ZCCHC23Q6ZST2 131 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 C10orf111Q8N326 155 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 MMGT1Q8N4V1 131 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 MORN4Q8NDC4 146 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 TSTD1Q8NFU3 115 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 PSMF1Q92530 271 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 MAGOHBQ96A72 148 aaKnown RBP0.52□□□□□ -2.33
MDM2-227ENST00000540709 LINC00526Q96FQ7 95 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 CIB3Q96Q77 187 aaPredicted RBP0.52□□□□□ -2.33
MDM2-227ENST00000540709 FAM107BQ9H098 131 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 COPZ2Q9P299 210 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 ARHGEF10O15013 1369 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 NCAPD3P42695 1498 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 NUP210Q8TEM1 1887 aaPredicted RBP0.52□□□□□ -2.33
MDM2-227ENST00000540709 CEP192Q8TEP8 1941 aa0.52□□□□□ -2.33
MDM2-227ENST00000540709 PNMA8CA0A1B0GUJ8 204 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 IFITM5A6NNB3 132 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 CDC42EP2O14613 210 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 RBP4P02753 201 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 SCTP09683 121 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 HLA-DRB4P13762 266 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 DNAJB13P59910 316 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 NCS1P62166 190 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 HIST1H1AQ02539 215 aaPredicted RBP0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms