RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 VAMP3Q15836 100 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 DEFB136Q30KP8 78 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 RPL7L1Q6DKI1 246 aaKnown RBP3.34□□□□□ -1.87
USP48-211ENST00000526044 LAMTOR1Q6IAA8 161 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 TOMM20LQ6UXN7 152 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 Q6ZRG5 221 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 Q6ZRP5 223 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 CYP2G1PQ6ZSU1 146 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 OR4F17Q8NGA8 305 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 OR51G1Q8NGK1 321 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 GATAD1Q8WUU5 269 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 OR4F4Q96R69 305 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 MGST2Q99735 147 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 ZNF471Q9BX82 626 aaPredicted RBP3.34□□□□□ -1.87
USP48-211ENST00000526044 SAV1Q9H4B6 383 aaPredicted RBP3.34□□□□□ -1.87
USP48-211ENST00000526044 CYTL1Q9NRR1 136 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 NSD1Q96L73 2696 aaPredicted RBP3.33□□□□□ -1.88
USP48-211ENST00000526044 WI2-2373I1.2A0A1W2PRP0 233 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 K7EMT4 169 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 M0QXV9 152 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 LGALS9O00182 355 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 NDUFA4O00483 81 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 BCL2L11O43521 198 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 HYPMO75409 117 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 IL4P05112 153 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 LINC00869P0C866 280 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 TPT1P13693 172 aaKnown RBP3.33□□□□□ -1.88
USP48-211ENST00000526044 ORM2P19652 201 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 NPPCP23582 126 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 GATA2P23769 480 aaPredicted RBP3.33□□□□□ -1.88
USP48-211ENST00000526044 ATP6V0CP27449 155 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 S100A7P31151 101 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 SYNJ2BPP57105 145 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 SERF2P84101 59 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 MIC13Q5XKP0 118 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 S100A7AQ86SG5 101 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 SLC51BQ86UW2 128 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 BAP18Q8IXM2 172 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 LINC00518Q8N0U6 118 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 LINC01561Q8N1V8 128 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 C9orf62Q8N4C0 152 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 HSD17B11Q8NBQ5 300 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 DLX4Q92988 240 aaPredicted RBP3.33□□□□□ -1.88
USP48-211ENST00000526044 GNPNAT1Q96EK6 184 aaPredicted RBP3.33□□□□□ -1.88
USP48-211ENST00000526044 GINS3Q9BRX5 216 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 RSG1Q9BU20 258 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 PBDC1Q9BVG4 233 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 GGTLC1Q9BX51 225 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 NPCDR1Q9BY65 106 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 ARV1Q9H2C2 271 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 OR51M1Q9H341 326 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 KCNIP2Q9NS61 270 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 RABAC1Q9UI14 185 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 UFC1Q9Y3C8 167 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 TIMM9Q9Y5J7 89 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 PXMP4Q9Y6I8 212 aa3.33□□□□□ -1.88
USP48-211ENST00000526044 NIPBLQ6KC79 2804 aaeCLIP3.33□□□□□ -1.88
USP48-211ENST00000526044 IGHV3OR16-8A0A075B7F1 116 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 SNURFLB1AK76 121 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 G3V4G9 280 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 OVOL1O14753 267 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 ZNF207O43670 478 aaKnown RBP3.32□□□□□ -1.88
USP48-211ENST00000526044 OR5G3P0C626 314 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 SEC11BP0C7V7 166 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 CBLN1P23435 193 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 RPL13AP40429 203 aaKnown RBP3.32□□□□□ -1.88
USP48-211ENST00000526044 LYZP61626 148 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 ACOT6Q3I5F7 207 aaPredicted RBP3.32□□□□□ -1.88
USP48-211ENST00000526044 KRTAP21-3Q3LHN1 58 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 C10orf113Q5VZT2 155 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 EIF5AL1Q6IS14 154 aaKnown RBP3.32□□□□□ -1.88
USP48-211ENST00000526044 UNQ9165/PRO28630Q6UXU0 137 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 PATE2Q6UY27 113 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 OR2G3Q8NGZ4 309 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 NARS2Q96I59 477 aaKnown RBP3.32□□□□□ -1.88
USP48-211ENST00000526044 METTL26Q96S19 204 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 PYGO2Q9BRQ0 406 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 PSMG3Q9BT73 122 aaPredicted RBP3.32□□□□□ -1.88
USP48-211ENST00000526044 SLC39A9Q9NUM3 307 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 MRPL27Q9P0M9 148 aaKnown RBP3.32□□□□□ -1.88
USP48-211ENST00000526044 HIGD1AQ9Y241 93 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 RFNGQ9Y644 331 aa3.32□□□□□ -1.88
USP48-211ENST00000526044 MTORP42345 2549 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 IGHV3-49A0A0A0MS15 119 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 IGHV7-4-1A0A0J9YVY3 117 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 LOC105371267A0A1B0GV96 52 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 C2orf70A6NJV1 201 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 UMAD1C9J7I0 102 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 COX7A2P2O60397 106 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 ATP5LO75964 103 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 C8orf88P0DMB2 117 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 FOLR2P14207 255 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 RPL35AP18077 110 aaKnown RBP3.31□□□□□ -1.88
USP48-211ENST00000526044 M6PRP20645 277 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 CRYBB3P26998 211 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 G0S2P27469 103 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 XGP55808 180 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 AKR1C8PQ5T2L2 129 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 FAM78BQ5VT40 261 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 LINC00305Q7Z4B0 112 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms