RNA–Protein interactions for RNA: ENST00000493638.1

SRPK2-215, Transcript of SRSF protein kinase 2, human

TSL 3

Gene SRPK2, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRPK2-215	ENST00000493638	CLEC5A	Q9NY25	188 aa		2.6	□□□□□ -1.99
SRPK2-215	ENST00000493638	HIGD1A	Q9Y241	93 aa		2.6	□□□□□ -1.99
SRPK2-215	ENST00000493638	VPS13D	Q5THJ4	4388 aa		2.6	□□□□□ -1.99
SRPK2-215	ENST00000493638		A0A1W2PS18	150 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638		A8MZ25	164 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638		H3BMM0	161 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	DEFB4A	O15263	64 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	COX7A2P2	O60397	106 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	CFD	P00746	253 aa	Predicted RBP	2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	RBMY1A1	P0DJD3	496 aa	Known RBP	2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	RBMY1C	P0DJD4	496 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	IGLC2	P0DOY2	106 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	C4BPB	P20851	252 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	FGF8	P55075	233 aa	Predicted RBP	2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	SELENOT	P62341	195 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	HBG1	P69891	147 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	HBG2	P69892	147 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	RBMY1F	Q15415	496 aa	Known RBP	2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	LCE3C	Q5T5A8	94 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	FAM78B	Q5VT40	261 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	C10orf113	Q5VZT2	155 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	KRTAP7-1	Q8IUC3	87 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	KCNRG	Q8N5I3	272 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	SCGB1C1	Q8TD33	95 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	BLNK	Q8WV28	456 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	FXYD5	Q96DB9	178 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	SPAG8	Q99932	426 aa	Predicted RBP	2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	B9D2	Q9BPU9	175 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	TM2D3	Q9BRN9	247 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	GPR61	Q9BZJ8	451 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	MFF	Q9GZY8	342 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	SLC35B3	Q9H1N7	401 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	NRN1	Q9NPD7	142 aa		2.59	□□□□□ -1.99
SRPK2-215	ENST00000493638	LYST	Q99698	3801 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	KMT2A	Q03164	3969 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	TRAV12-2	A0A075B6T6	113 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	2.58	□□□□□ -2
SRPK2-215	ENST00000493638	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	2.58	□□□□□ -2
SRPK2-215	ENST00000493638		A0A1B0GV50	99 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	HELT	A6NFD8	242 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	OR4C46	A6NHA9	309 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	HMSD	A8MTL9	139 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	CRX	O43186	299 aa	Predicted RBP	2.58	□□□□□ -2
SRPK2-215	ENST00000493638	IFNA5	P01569	189 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	IGKV2D-40	P01614	121 aa	Predicted RBP	2.58	□□□□□ -2
SRPK2-215	ENST00000493638	CT45A10	P0DMU9	189 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	AZU1	P20160	251 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	LINC01547	P58512	204 aa	Predicted RBP	2.58	□□□□□ -2
SRPK2-215	ENST00000493638	PAFAH1B2	P68402	229 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	CCL20	P78556	96 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	PSG3	Q16557	428 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	DEFB135	Q30KP9	77 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	C1orf194	Q5T5A4	169 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	AMTN	Q6UX39	209 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638		Q6ZRG5	221 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	TRPT1	Q86TN4	253 aa	Known RBP	2.58	□□□□□ -2
SRPK2-215	ENST00000493638	GTSCR1	Q86UQ5	136 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	TCTE3	Q8IZS6	198 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	C1orf158	Q8N1D5	194 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	C9orf62	Q8N4C0	152 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	ZNF709	Q8N972	641 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	INO80E	Q8NBZ0	244 aa	Predicted RBP	2.58	□□□□□ -2
SRPK2-215	ENST00000493638	CSNK1G2-AS1	Q8NCQ2	148 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	OR4B1	Q8NGF8	309 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	OR10G4	Q8NGN3	311 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	OR10G9	Q8NGN4	311 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	OR10G7	Q8NGN6	311 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	OR2G3	Q8NGZ4	309 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	PCNP	Q8WW12	178 aa	Known RBP	2.58	□□□□□ -2
SRPK2-215	ENST00000493638	TVP23C	Q96ET8	276 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	PHYHIPL	Q96FC7	376 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	SGK494	Q96LW2	274 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	VGLL1	Q99990	258 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	PAXX	Q9BUH6	204 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	AGPAT4-IT1	Q9H0P7	198 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	CSTL1	Q9H114	145 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	OR51M1	Q9H341	326 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	ZNF331	Q9NQX6	463 aa	Predicted RBP	2.58	□□□□□ -2
SRPK2-215	ENST00000493638	XCL2	Q9UBD3	114 aa		2.58	□□□□□ -2
SRPK2-215	ENST00000493638	TRBV19	A0A075B6N1	114 aa		2.57	□□□□□ -2
SRPK2-215	ENST00000493638		A0A087X0K7	114 aa		2.57	□□□□□ -2
SRPK2-215	ENST00000493638	TRAV2	A0A0B4J234	112 aa		2.57	□□□□□ -2
SRPK2-215	ENST00000493638		A0A0J9YX75	114 aa		2.57	□□□□□ -2
SRPK2-215	ENST00000493638	PGP	A6NDG6	321 aa		2.57	□□□□□ -2
SRPK2-215	ENST00000493638	ZNF705G	A8MUZ8	300 aa	Predicted RBP	2.57	□□□□□ -2
SRPK2-215	ENST00000493638	BOLA2-SMG1P6	H3BVE0	249 aa		2.57	□□□□□ -2
SRPK2-215	ENST00000493638		J3KRW8	73 aa		2.57	□□□□□ -2
SRPK2-215	ENST00000493638		M0R2Z0	102 aa		2.57	□□□□□ -2
SRPK2-215	ENST00000493638	MPDU1	O75352	247 aa		2.57	□□□□□ -2
SRPK2-215	ENST00000493638	C1QB	P02746	253 aa		2.57	□□□□□ -2
SRPK2-215	ENST00000493638	FABP1	P07148	127 aa		2.57	□□□□□ -2
SRPK2-215	ENST00000493638	NBEAP1	P0C6P0	100 aa		2.57	□□□□□ -2
SRPK2-215	ENST00000493638	HIST1H1E	P10412	219 aa	Known RBP	2.57	□□□□□ -2
SRPK2-215	ENST00000493638	SPP1	P10451	314 aa		2.57	□□□□□ -2
SRPK2-215	ENST00000493638	HLA-DRB4	P13762	266 aa		2.57	□□□□□ -2
SRPK2-215	ENST00000493638	RPL7	P18124	248 aa	Known RBP	2.57	□□□□□ -2
SRPK2-215	ENST00000493638	M6PR	P20645	277 aa		2.57	□□□□□ -2
SRPK2-215	ENST00000493638	NUP62	P37198	522 aa	Predicted RBP	2.57	□□□□□ -2
SRPK2-215	ENST00000493638	GALR1	P47211	349 aa		2.57	□□□□□ -2
SRPK2-215	ENST00000493638	CNN1	P51911	297 aa	Known RBP	2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms