RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 LCN15Q6UWW0 184 aa4.43□□□□□ -1.7
RIF1-210ENST00000484077 PATE2Q6UY27 113 aa4.43□□□□□ -1.7
RIF1-210ENST00000484077 Q6ZRG5 221 aa4.43□□□□□ -1.7
RIF1-210ENST00000484077 ST6GAL2Q96JF0 529 aa4.43□□□□□ -1.7
RIF1-210ENST00000484077 ATP5SQ99766 215 aa4.43□□□□□ -1.7
RIF1-210ENST00000484077 RSG1Q9BU20 258 aa4.43□□□□□ -1.7
RIF1-210ENST00000484077 MED28Q9H204 178 aa4.43□□□□□ -1.7
RIF1-210ENST00000484077 C11orf68Q9H3H3 251 aaKnown RBP4.43□□□□□ -1.7
RIF1-210ENST00000484077 RPRMQ9NS64 109 aa4.43□□□□□ -1.7
RIF1-210ENST00000484077 SLC39A9Q9NUM3 307 aa4.43□□□□□ -1.7
RIF1-210ENST00000484077 HSPB11Q9Y547 144 aa4.43□□□□□ -1.7
RIF1-210ENST00000484077 NBEAL2Q6ZNJ1 2754 aa4.43□□□□□ -1.7
RIF1-210ENST00000484077 TRAV8-2A0A0B4J237 113 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 F6UB75 175 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 H3BMM0 161 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 MRPS12O15235 138 aaKnown RBP4.42□□□□□ -1.7
RIF1-210ENST00000484077 PAGE4O60829 102 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 RPL12P30050 165 aaKnown RBP4.42□□□□□ -1.7
RIF1-210ENST00000484077 LINC01547P58512 204 aaPredicted RBP4.42□□□□□ -1.7
RIF1-210ENST00000484077 NUTF2P61970 127 aaKnown RBP4.42□□□□□ -1.7
RIF1-210ENST00000484077 RPL24P83731 157 aaKnown RBP4.42□□□□□ -1.7
RIF1-210ENST00000484077 FCN2Q15485 313 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 CASC10Q5T4H9 136 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 SPATA31B1PQ5VZV4 182 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 EBLN2Q6P2I7 272 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 BPIFA4PQ86YQ2 179 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 RNF182Q8N6D2 247 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 ZNF738Q8NE65 137 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 OR11H7Q8NGC8 314 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 OR11H2Q8NH07 326 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 TMEM37Q8WXS4 190 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 RARRES2Q99969 163 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 SLC50A1Q9BRV3 221 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 SMIM3Q9BZL3 60 aa4.42□□□□□ -1.7
RIF1-210ENST00000484077 WDR61Q9GZS3 305 aaKnown RBP4.42□□□□□ -1.7
RIF1-210ENST00000484077 KMT2CQ8NEZ4 4911 aaKnown RBP4.42□□□□□ -1.7
RIF1-210ENST00000484077 A0A0J9YX75 114 aa4.41□□□□□ -1.7
RIF1-210ENST00000484077 ZNF705EA8MWA4 302 aaPredicted RBP4.41□□□□□ -1.7
RIF1-210ENST00000484077 C17orf112F2Z3M2 114 aa4.41□□□□□ -1.7
RIF1-210ENST00000484077 SLC17A3O00476 420 aa4.41□□□□□ -1.7
RIF1-210ENST00000484077 GIG44P09565 113 aaPredicted RBP4.41□□□□□ -1.7
RIF1-210ENST00000484077 GIPP09681 153 aaPredicted RBP4.41□□□□□ -1.7
RIF1-210ENST00000484077 IGLC2P0DOY2 106 aa4.41□□□□□ -1.7
RIF1-210ENST00000484077 HLA-DMBP28068 263 aa4.41□□□□□ -1.7
RIF1-210ENST00000484077 OXA1LQ15070 435 aa4.41□□□□□ -1.7
RIF1-210ENST00000484077 ZNF709Q8N972 641 aa4.41□□□□□ -1.7
RIF1-210ENST00000484077 Q8NAQ8 132 aa4.41□□□□□ -1.7
RIF1-210ENST00000484077 OR4B1Q8NGF8 309 aa4.41□□□□□ -1.7
RIF1-210ENST00000484077 LRRC20Q8TCA0 184 aa4.41□□□□□ -1.7
RIF1-210ENST00000484077 ASB13Q8WXK3 278 aa4.41□□□□□ -1.7
RIF1-210ENST00000484077 RNF126Q9BV68 326 aa4.41□□□□□ -1.7
RIF1-210ENST00000484077 MFFQ9GZY8 342 aa4.41□□□□□ -1.7
RIF1-210ENST00000484077 CLEC5AQ9NY25 188 aa4.41□□□□□ -1.7
RIF1-210ENST00000484077 XCL2Q9UBD3 114 aa4.41□□□□□ -1.7
RIF1-210ENST00000484077 TRAV5A0A0B4J249 113 aa4.4□□□□□ -1.71
RIF1-210ENST00000484077 NUPR2A6NF83 97 aa4.4□□□□□ -1.71
RIF1-210ENST00000484077 H3BTX0 84 aa4.4□□□□□ -1.71
RIF1-210ENST00000484077 BOLA2-SMG1P6H3BVE0 249 aa4.4□□□□□ -1.71
RIF1-210ENST00000484077 DUSP14O95147 198 aaKnown RBP4.4□□□□□ -1.71
RIF1-210ENST00000484077 INSP01308 110 aa4.4□□□□□ -1.71
RIF1-210ENST00000484077 IFNA5P01569 189 aa4.4□□□□□ -1.71
RIF1-210ENST00000484077 SNRPCP09234 159 aaKnown RBP4.4□□□□□ -1.71
RIF1-210ENST00000484077 MIFP14174 115 aa4.4□□□□□ -1.71
RIF1-210ENST00000484077 CNN1P51911 297 aaKnown RBP4.4□□□□□ -1.71
RIF1-210ENST00000484077 FXYD7P58549 80 aa4.4□□□□□ -1.71
RIF1-210ENST00000484077 HIST1H1AQ02539 215 aaPredicted RBP4.4□□□□□ -1.71
RIF1-210ENST00000484077 GUK1Q16774 197 aa4.4□□□□□ -1.71
RIF1-210ENST00000484077 GCSAMLQ5JQS6 135 aa4.4□□□□□ -1.71
RIF1-210ENST00000484077 FAM78BQ5VT40 261 aa4.4□□□□□ -1.71
RIF1-210ENST00000484077 CSNK1G2-AS1Q8NCQ2 148 aa4.4□□□□□ -1.71
RIF1-210ENST00000484077 MRPL32Q9BYC8 188 aaKnown RBP4.4□□□□□ -1.71
RIF1-210ENST00000484077 PARD6GQ9BYG4 376 aaPredicted RBP4.4□□□□□ -1.71
RIF1-210ENST00000484077 SLC35B3Q9H1N7 401 aa4.4□□□□□ -1.71
RIF1-210ENST00000484077 DNAJC4Q9NNZ3 241 aa4.4□□□□□ -1.71
RIF1-210ENST00000484077 ZNF331Q9NQX6 463 aaPredicted RBP4.4□□□□□ -1.71
RIF1-210ENST00000484077 PLECQ15149 4684 aaKnown RBP4.39□□□□□ -1.71
RIF1-210ENST00000484077 IGHV3OR16-12A0A075B7B8 117 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 FXYD6-FXYD2A0A087WZ82 144 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 A8MTW9 85 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 H3BQ15 152 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 DEFB4AO15263 64 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 ZNF253O75346 499 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 ZNF705DP0CH99 300 aaPredicted RBP4.39□□□□□ -1.71
RIF1-210ENST00000484077 ZNF705BP0CI00 300 aaPredicted RBP4.39□□□□□ -1.71
RIF1-210ENST00000484077 PYYP10082 97 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 PSG9Q00887 426 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 PDE6HQ13956 83 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 ZNF266Q14584 549 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 PSG3Q16557 428 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 SPINK13Q1W4C9 94 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 FFAR4Q5NUL3 377 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 AMTNQ6UX39 209 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 MIR17HGQ75NE6 70 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 BAP18Q8IXM2 172 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 OR8A1Q8NGG7 326 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 SCGB1C1Q8TD33 95 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 RPUSD4Q96CM3 377 aaKnown RBP4.39□□□□□ -1.71
RIF1-210ENST00000484077 AQP10Q96PS8 301 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 SLC25A2Q9BXI2 301 aa4.39□□□□□ -1.71
RIF1-210ENST00000484077 HRH4Q9H3N8 390 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms