RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 H3BQ15 152 aa8.96□□□□□ -0.98
PTPRF-213ENST00000481019 SLC25A5P05141 298 aaKnown RBP8.96□□□□□ -0.98
PTPRF-213ENST00000481019 CMC4P56277 68 aaPredicted RBP8.96□□□□□ -0.98
PTPRF-213ENST00000481019 SRSF3P84103 164 aaKnown RBP8.96□□□□□ -0.98
PTPRF-213ENST00000481019 PNRC1Q12796 327 aaPredicted RBP8.96□□□□□ -0.98
PTPRF-213ENST00000481019 ACTL10Q5JWF8 245 aa8.96□□□□□ -0.98
PTPRF-213ENST00000481019 GDF5OSQ5U4N7 250 aa8.96□□□□□ -0.98
PTPRF-213ENST00000481019 IGFL4Q6B9Z1 124 aa8.96□□□□□ -0.98
PTPRF-213ENST00000481019 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.96□□□□□ -0.98
PTPRF-213ENST00000481019 TRPT1Q86TN4 253 aaKnown RBP8.96□□□□□ -0.98
PTPRF-213ENST00000481019 SVBPQ8N300 66 aa8.96□□□□□ -0.98
PTPRF-213ENST00000481019 C11orf52Q96A22 123 aa8.96□□□□□ -0.98
PTPRF-213ENST00000481019 EPDR1Q9UM22 224 aa8.96□□□□□ -0.98
PTPRF-213ENST00000481019 YTHDF2Q9Y5A9 579 aaKnown RBP8.96□□□□□ -0.98
PTPRF-213ENST00000481019 TENM2Q9NT68 2774 aa8.95□□□□□ -0.98
PTPRF-213ENST00000481019 TRAV8-2A0A0B4J237 113 aa8.95□□□□□ -0.98
PTPRF-213ENST00000481019 KIR2DL5BA0A0G2JN68 375 aa8.95□□□□□ -0.98
PTPRF-213ENST00000481019 KIR2DL5BA0A0G2JPC4 375 aa8.95□□□□□ -0.98
PTPRF-213ENST00000481019 ZNF727A8MUV8 499 aa8.95□□□□□ -0.98
PTPRF-213ENST00000481019 PRB4P10163 310 aaPredicted RBP8.95□□□□□ -0.98
PTPRF-213ENST00000481019 ATP5G3P48201 142 aa8.95□□□□□ -0.98
PTPRF-213ENST00000481019 CNN1P51911 297 aaKnown RBP8.95□□□□□ -0.98
PTPRF-213ENST00000481019 CEBPGP53567 150 aa8.95□□□□□ -0.98
PTPRF-213ENST00000481019 APOC4P55056 127 aa8.95□□□□□ -0.98
PTPRF-213ENST00000481019 TAS2R60P59551 318 aa8.95□□□□□ -0.98
PTPRF-213ENST00000481019 C10orf91Q5T1B1 145 aa8.95□□□□□ -0.98
PTPRF-213ENST00000481019 KIR2DL5AQ8N109 375 aa8.95□□□□□ -0.98
PTPRF-213ENST00000481019 CYB561D1Q8N8Q1 229 aa8.95□□□□□ -0.98
PTPRF-213ENST00000481019 KIR2DL5BQ8NHK3 375 aa8.95□□□□□ -0.98
PTPRF-213ENST00000481019 MRPL53Q96EL3 112 aaKnown RBP8.95□□□□□ -0.98
PTPRF-213ENST00000481019 C16orf92Q96LL3 132 aa8.95□□□□□ -0.98
PTPRF-213ENST00000481019 SMIM7Q9BQ49 75 aa8.95□□□□□ -0.98
PTPRF-213ENST00000481019 ATG101Q9BSB4 218 aa8.95□□□□□ -0.98
PTPRF-213ENST00000481019 CARHSP1Q9Y2V2 147 aaKnown RBP8.95□□□□□ -0.98
PTPRF-213ENST00000481019 GGTLC3B5MD39 225 aa8.94□□□□□ -0.98
PTPRF-213ENST00000481019 ISLRO14498 428 aa8.94□□□□□ -0.98
PTPRF-213ENST00000481019 NDUFB4O95168 129 aa8.94□□□□□ -0.98
PTPRF-213ENST00000481019 SNAPINO95295 136 aa8.94□□□□□ -0.98
PTPRF-213ENST00000481019 SNRPCP09234 159 aaKnown RBP8.94□□□□□ -0.98
PTPRF-213ENST00000481019 AKR1C3P42330 323 aa8.94□□□□□ -0.98
PTPRF-213ENST00000481019 UBE2G1P62253 170 aa8.94□□□□□ -0.98
PTPRF-213ENST00000481019 TMEM241Q24JQ0 296 aa8.94□□□□□ -0.98
PTPRF-213ENST00000481019 RNF183Q96D59 192 aa8.94□□□□□ -0.98
PTPRF-213ENST00000481019 LINC00052Q96N35 136 aa8.94□□□□□ -0.98
PTPRF-213ENST00000481019 CSTL1Q9H114 145 aa8.94□□□□□ -0.98
PTPRF-213ENST00000481019 ZNF331Q9NQX6 463 aaPredicted RBP8.94□□□□□ -0.98
PTPRF-213ENST00000481019 ALMS1Q8TCU4 4167 aa8.94□□□□□ -0.98
PTPRF-213ENST00000481019 B4DEV8 164 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 F6UB75 175 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 PEX7O00628 323 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 UBE2CO00762 179 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 SPRY2O43597 315 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 CA1P00915 261 aaPredicted RBP8.93□□□□□ -0.98
PTPRF-213ENST00000481019 APOC3P02656 99 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 HLA-DMBP28068 263 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 SNRPD3P62318 126 aaKnown RBP8.93□□□□□ -0.98
PTPRF-213ENST00000481019 Q6ZWC4 215 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 STHQ8IWL8 128 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 RNF182Q8N6D2 247 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 TVP23CQ96ET8 276 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 SMIM12Q96EX1 92 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 FMC1Q96HJ9 113 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 PARLQ9H300 379 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 BIN3Q9NQY0 253 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 NAT8Q9UHE5 227 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 LY96Q9Y6Y9 160 aa8.93□□□□□ -0.98
PTPRF-213ENST00000481019 HYDINQ4G0P3 5121 aa8.92□□□□□ -0.98
PTPRF-213ENST00000481019 RBAKDNA6NC62 111 aa8.92□□□□□ -0.98
PTPRF-213ENST00000481019 C9JCJ5 164 aa8.92□□□□□ -0.98
PTPRF-213ENST00000481019 C9JQL5 133 aa8.92□□□□□ -0.98
PTPRF-213ENST00000481019 H3BMM0 161 aa8.92□□□□□ -0.98
PTPRF-213ENST00000481019 TCRAP04437 139 aa8.92□□□□□ -0.98
PTPRF-213ENST00000481019 ZNF674Q2M3X9 581 aa8.92□□□□□ -0.98
PTPRF-213ENST00000481019 MUC7Q8TAX7 377 aa8.92□□□□□ -0.98
PTPRF-213ENST00000481019 TRBV6-1A0A0K0K1D8 114 aa8.91□□□□□ -0.98
PTPRF-213ENST00000481019 SCO2A0A1W2PP80 73 aa8.91□□□□□ -0.98
PTPRF-213ENST00000481019 H3BTX0 84 aa8.91□□□□□ -0.98
PTPRF-213ENST00000481019 IGKV3-20P01619 116 aa8.91□□□□□ -0.98
PTPRF-213ENST00000481019 RPL35P42766 123 aaKnown RBP8.91□□□□□ -0.98
PTPRF-213ENST00000481019 GNG4P50150 75 aa8.91□□□□□ -0.98
PTPRF-213ENST00000481019 PSG3Q16557 428 aa8.91□□□□□ -0.98
PTPRF-213ENST00000481019 TMEM183BQ1AE95 376 aa8.91□□□□□ -0.98
PTPRF-213ENST00000481019 ZFAND6Q6FIF0 208 aa8.91□□□□□ -0.98
PTPRF-213ENST00000481019 EXOC3-AS1Q8N2X6 119 aa8.91□□□□□ -0.98
PTPRF-213ENST00000481019 C2CD4CQ8TF44 421 aa8.91□□□□□ -0.98
PTPRF-213ENST00000481019 TP53TG1Q9Y2A0 90 aa8.91□□□□□ -0.98
PTPRF-213ENST00000481019 ZFP30Q9Y2G7 519 aa8.91□□□□□ -0.98
PTPRF-213ENST00000481019 KLF12Q9Y4X4 402 aa8.91□□□□□ -0.98
PTPRF-213ENST00000481019 A0A0J9YWU9 116 aa8.9□□□□□ -0.98
PTPRF-213ENST00000481019 DIRC3C9JPN6 131 aa8.9□□□□□ -0.98
PTPRF-213ENST00000481019 M0R036 132 aa8.9□□□□□ -0.98
PTPRF-213ENST00000481019 ZNF705DP0CH99 300 aaPredicted RBP8.9□□□□□ -0.98
PTPRF-213ENST00000481019 ZNF705BP0CI00 300 aaPredicted RBP8.9□□□□□ -0.98
PTPRF-213ENST00000481019 HLA-DRB4P13762 266 aa8.9□□□□□ -0.98
PTPRF-213ENST00000481019 FXYD7P58549 80 aa8.9□□□□□ -0.98
PTPRF-213ENST00000481019 SAPCD1Q5SSQ6 148 aa8.9□□□□□ -0.98
PTPRF-213ENST00000481019 TMEM75Q8N9X5 138 aa8.9□□□□□ -0.98
PTPRF-213ENST00000481019 CSNK1G2-AS1Q8NCQ2 148 aa8.9□□□□□ -0.98
PTPRF-213ENST00000481019 NDFIP1Q9BT67 221 aa8.9□□□□□ -0.98
PTPRF-213ENST00000481019 SAV1Q9H4B6 383 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms