RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 MT-ATP8P03928 68 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 RPS17P08708 135 aaKnown RBP-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HMGB1P09429 215 aaKnown RBP-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 SPART-AS1P0CW21 52 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HIST1H2BOP23527 126 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HIST1H2BBP33778 126 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HIST1H2BDP58876 126 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HIST1H2BCP62807 126 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HIST2H2BEQ16778 126 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HIST2H2BFQ5QNW6 126 aaPredicted RBP-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 C1orf195Q5TG92 126 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 ALKAL1Q6UXT8 129 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CYP2G1PQ6ZSU1 146 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 Q6ZUT4 128 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 COMMD7Q86VX2 200 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 SMIM4Q8WVI0 70 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HIST1H2BHQ93079 126 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HIST1H2BNQ99877 126 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HIST1H2BMQ99879 126 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 BEX1Q9HBH7 125 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 C6orf50Q9HD87 102 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HPF1Q9NWY4 346 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 PTTG3PQ9NZH4 202 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 AK3Q9UIJ7 227 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 LY75O60449 1722 aa-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 EIF3AQ14152 1382 aaKnown RBP-4.16□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CXorf51AA0A1B0GTR3 108 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 A8MT66 165 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 BBIP1A8MTZ0 92 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 TMEM114B3SHH9 223 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 ANXA5P08758 320 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 PMCHP20382 165 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 AGTR1P30556 359 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 TTPAP49638 278 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HSDL1Q3SXM5 330 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HSP90AB4PQ58FF6 505 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 C3orf33Q6P1S2 294 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 RPL22L1Q6P5R6 122 aaKnown RBP-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 COX6B2Q6YFQ2 88 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 PDZD9Q8IXQ8 264 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 OR51Q1Q8NH59 317 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HIST1H2BLQ99880 126 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 MAP1LC3CQ9BXW4 147 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 C19orf12Q9NSK7 152 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 STX8Q9UNK0 236 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CYSLTR1Q9Y271 337 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 ANKRD36A6QL64 1941 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 IBTKQ9P2D0 1353 aaPredicted RBP-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 RGPD2P0DJD1 1756 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 ANKRD36CQ5JPF3 1778 aa-4.17□□□□□ -3.08
RNU6-1340P-201ENST00000384438 A0A0G2JMZ2 1700 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 RAD50Q92878 1312 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 DISP2A7MBM2 1401 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CLIP1P30622 1438 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 UBE2L5PA0A1B0GUS4 154 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 METTL15A6NJ78 407 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 LDOC1O95751 146 aaPredicted RBP-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 FABP4P15090 132 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 KRT20P35900 424 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 PAFAH1B2P68402 229 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 OR8B8Q15620 311 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 PMF1Q6P1K2 205 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 SPESP1Q6UW49 350 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 OR8I2Q8N0Y5 310 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 NATD1Q8N6N6 113 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 OR5D16Q8NGK9 328 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 DNAJB3Q8WWF6 145 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 LRRC45Q96CN5 670 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CMSS1Q9BQ75 279 aaKnown RBP-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 KIAA1551Q9HCM1 1747 aa-4.18□□□□□ -3.08
RNU6-1340P-201ENST00000384438 FGD6Q6ZV73 1430 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 PRG4Q92954 1404 aaPredicted RBP-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 GOLGA8QA0A0J9YX86 632 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 SERTM2A0A1B0GWG4 89 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 GOLGA8OA6NCC3 632 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 SNTNA6NMZ2 147 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 GOLGA8NF8WBI6 632 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 F8WEM9 126 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 SCGNO76038 276 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 SAA1P0DJI8 122 aaPredicted RBP-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CD9P21926 228 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CEBPGP53567 150 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 DYNLL1P63167 89 aaKnown RBP-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 NUCB2P80303 420 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 GUK1Q16774 197 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 C5orf64Q2M2E5 130 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HOOK3Q86VS8 718 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CLHC1Q8NHS4 586 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 DHRS9Q9BPW9 319 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 TMEM126AQ9H061 195 aa-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 MRPL40Q9NQ50 206 aaKnown RBP-4.19□□□□□ -3.08
RNU6-1340P-201ENST00000384438 USP32Q8NFA0 1604 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 TRAV34A0A0B4J273 112 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 TRBV2A0A0J9YWF9 115 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CLPSL1A2RUU4 121 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 SMIM30A4D0T7 59 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 ZNF701M0R085 212 aaPredicted RBP-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 IFRD1O00458 451 aaPredicted RBP-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 GCGP01275 180 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 TFF1P04155 84 aa-4.2□□□□□ -3.08
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms