RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 AMN1Q8IY45 258 aa14.2□□□□□ -0.14
CLSTN1-202ENST00000377298 ACACBO00763 2458 aa14.2□□□□□ -0.14
CLSTN1-202ENST00000377298 A0A087WWL8 130 aa14.2□□□□□ -0.14
CLSTN1-202ENST00000377298 IGHV4-30-2A0A087WSY4 118 aa14.2□□□□□ -0.14
CLSTN1-202ENST00000377298 H3BUT2 72 aa14.2□□□□□ -0.14
CLSTN1-202ENST00000377298 PGPEP1Q9NXJ5 209 aa14.2□□□□□ -0.14
CLSTN1-202ENST00000377298 CENPVL3A0A0U1RRI6 287 aa14.19□□□□□ -0.14
CLSTN1-202ENST00000377298 IGHV4-59P01825 116 aa14.19□□□□□ -0.14
CLSTN1-202ENST00000377298 IGHV7-4-1A0A0J9YVY3 117 aa14.19□□□□□ -0.14
CLSTN1-202ENST00000377298 OR2K2Q8NGT1 345 aa14.19□□□□□ -0.14
CLSTN1-202ENST00000377298 HAPLN4Q86UW8 402 aa14.19□□□□□ -0.14
CLSTN1-202ENST00000377298 C10orf105Q8TEF2 133 aa14.19□□□□□ -0.14
CLSTN1-202ENST00000377298 ARFGEF3Q5TH69 2177 aa14.19□□□□□ -0.14
CLSTN1-202ENST00000377298 DAD1P61803 113 aa14.18□□□□□ -0.14
CLSTN1-202ENST00000377298 IGLC7A0M8Q6 106 aa14.18□□□□□ -0.14
CLSTN1-202ENST00000377298 LINC00158P58513 81 aa14.18□□□□□ -0.14
CLSTN1-202ENST00000377298 TRPT1Q86TN4 253 aaKnown RBP14.18□□□□□ -0.14
CLSTN1-202ENST00000377298 PLEKHB2Q96CS7 222 aa14.18□□□□□ -0.14
CLSTN1-202ENST00000377298 C5orf30Q96GV9 206 aa14.18□□□□□ -0.14
CLSTN1-202ENST00000377298 APOC4P55056 127 aa14.18□□□□□ -0.14
CLSTN1-202ENST00000377298 A8MWP6 167 aa14.17□□□□□ -0.14
CLSTN1-202ENST00000377298 F5H768 121 aa14.17□□□□□ -0.14
CLSTN1-202ENST00000377298 PRR25Q96S07 402 aa14.17□□□□□ -0.14
CLSTN1-202ENST00000377298 IGHV1OR15-1A0A075B7D0 117 aa14.17□□□□□ -0.14
CLSTN1-202ENST00000377298 TRAV2A0A0B4J234 112 aa14.17□□□□□ -0.14
CLSTN1-202ENST00000377298 GGTLC3B5MD39 225 aa14.17□□□□□ -0.14
CLSTN1-202ENST00000377298 CDKN1BP46527 198 aa14.17□□□□□ -0.14
CLSTN1-202ENST00000377298 Q8NA96 180 aa14.17□□□□□ -0.14
CLSTN1-202ENST00000377298 ZNF726P1Q15940 193 aa14.17□□□□□ -0.14
CLSTN1-202ENST00000377298 PRR31Q5SQ13 230 aa14.17□□□□□ -0.14
CLSTN1-202ENST00000377298 A0A0U1RRA0 63 aa14.17□□□□□ -0.14
CLSTN1-202ENST00000377298 PRSS46E5RG02 174 aa14.16□□□□□ -0.14
CLSTN1-202ENST00000377298 C8orf49Q96NF6 230 aa14.16□□□□□ -0.14
CLSTN1-202ENST00000377298 ZNF491Q8N8L2 437 aa14.16□□□□□ -0.14
CLSTN1-202ENST00000377298 TMEM158Q8WZ71 300 aa14.16□□□□□ -0.14
CLSTN1-202ENST00000377298 RASL10AQ92737 203 aa14.16□□□□□ -0.14
CLSTN1-202ENST00000377298 C1orf159Q96HA4 380 aa14.16□□□□□ -0.14
CLSTN1-202ENST00000377298 C11orf68Q9H3H3 251 aaKnown RBP14.16□□□□□ -0.14
CLSTN1-202ENST00000377298 NHP2Q9NX24 153 aaKnown RBP14.16□□□□□ -0.14
CLSTN1-202ENST00000377298 S100A7L2Q5SY68 101 aa14.16□□□□□ -0.14
CLSTN1-202ENST00000377298 IL15RAQ13261 267 aa14.16□□□□□ -0.14
CLSTN1-202ENST00000377298 PRR20EP86478 221 aa14.15□□□□□ -0.14
CLSTN1-202ENST00000377298 PRR20CP86479 221 aa14.15□□□□□ -0.14
CLSTN1-202ENST00000377298 PRR20DP86480 221 aa14.15□□□□□ -0.14
CLSTN1-202ENST00000377298 PRR20BP86481 221 aa14.15□□□□□ -0.14
CLSTN1-202ENST00000377298 PRR20AP86496 221 aa14.15□□□□□ -0.14
CLSTN1-202ENST00000377298 FNDC4Q9H6D8 234 aaPredicted RBP14.15□□□□□ -0.14
CLSTN1-202ENST00000377298 C3orf79P0CE67 100 aa14.15□□□□□ -0.14
CLSTN1-202ENST00000377298 TMEM238C9JI98 176 aa14.15□□□□□ -0.14
CLSTN1-202ENST00000377298 MRPL52Q86TS9 123 aaKnown RBP14.15□□□□□ -0.14
CLSTN1-202ENST00000377298 IGHV3-64A0A075B6Q5 118 aa14.15□□□□□ -0.14
CLSTN1-202ENST00000377298 A0A1B0GWB2 263 aa14.15□□□□□ -0.14
CLSTN1-202ENST00000377298 SMKR1H3BMG3 65 aa14.15□□□□□ -0.14
CLSTN1-202ENST00000377298 FAM231DQ6ZW35 169 aa14.15□□□□□ -0.14
CLSTN1-202ENST00000377298 NPBQ8NG41 125 aa14.15□□□□□ -0.14
CLSTN1-202ENST00000377298 TNFRSF6BO95407 300 aa14.14□□□□□ -0.15
CLSTN1-202ENST00000377298 TSSC4Q9Y5U2 329 aaPredicted RBP14.14□□□□□ -0.15
CLSTN1-202ENST00000377298 A8MWV9 139 aa14.14□□□□□ -0.15
CLSTN1-202ENST00000377298 LYPD6Q86Y78 171 aa14.14□□□□□ -0.15
CLSTN1-202ENST00000377298 MTURNQ8N3F0 131 aa14.14□□□□□ -0.15
CLSTN1-202ENST00000377298 EREGO14944 169 aa14.13□□□□□ -0.15
CLSTN1-202ENST00000377298 ORAOV1Q8WV07 137 aa14.13□□□□□ -0.15
CLSTN1-202ENST00000377298 PHLDA1Q8WV24 401 aaPredicted RBP14.13□□□□□ -0.15
CLSTN1-202ENST00000377298 JPT2Q9H910 190 aa14.13□□□□□ -0.15
CLSTN1-202ENST00000377298 CUL9Q8IWT3 2517 aa14.13□□□□□ -0.15
CLSTN1-202ENST00000377298 FXYD5Q96DB9 178 aa14.13□□□□□ -0.15
CLSTN1-202ENST00000377298 CYYR1Q96J86 154 aa14.13□□□□□ -0.15
CLSTN1-202ENST00000377298 KLK9Q9UKQ9 250 aa14.13□□□□□ -0.15
CLSTN1-202ENST00000377298 ATP6V0BQ99437 205 aa14.13□□□□□ -0.15
CLSTN1-202ENST00000377298 ZMAT4Q9H898 229 aa14.13□□□□□ -0.15
CLSTN1-202ENST00000377298 A0A1B0GV72 72 aa14.12□□□□□ -0.15
CLSTN1-202ENST00000377298 LGALS1P09382 135 aaKnown RBP14.12□□□□□ -0.15
CLSTN1-202ENST00000377298 HSD52Q0P140 79 aa14.12□□□□□ -0.15
CLSTN1-202ENST00000377298 IGHV4-38-2P0DP08 117 aa14.12□□□□□ -0.15
CLSTN1-202ENST00000377298 DEFB104AQ8WTQ1 72 aa14.12□□□□□ -0.15
CLSTN1-202ENST00000377298 TMEM213A2RRL7 107 aa14.12□□□□□ -0.15
CLSTN1-202ENST00000377298 CST9LQ9H4G1 147 aa14.12□□□□□ -0.15
CLSTN1-202ENST00000377298 SHANK1Q9Y566 2161 aa14.12□□□□□ -0.15
CLSTN1-202ENST00000377298 C6orf226Q5I0X4 101 aa14.12□□□□□ -0.15
CLSTN1-202ENST00000377298 FAM104BQ5XKR9 115 aa14.12□□□□□ -0.15
CLSTN1-202ENST00000377298 KNCNA6PVL3 124 aa14.11□□□□□ -0.15
CLSTN1-202ENST00000377298 C11orf52Q96A22 123 aa14.11□□□□□ -0.15
CLSTN1-202ENST00000377298 LY6G5BQ8NDX9 201 aa14.11□□□□□ -0.15
CLSTN1-202ENST00000377298 FOXE3Q13461 319 aa14.11□□□□□ -0.15
CLSTN1-202ENST00000377298 SS18Q15532 418 aa14.11□□□□□ -0.15
CLSTN1-202ENST00000377298 TTC32Q5I0X7 151 aa14.11□□□□□ -0.15
CLSTN1-202ENST00000377298 ANXA2RQ3ZCQ2 193 aa14.1□□□□□ -0.15
CLSTN1-202ENST00000377298 MED13Q9UHV7 2174 aa14.1□□□□□ -0.15
CLSTN1-202ENST00000377298 POLR3KQ9Y2Y1 108 aaPredicted RBP14.1□□□□□ -0.15
CLSTN1-202ENST00000377298 IGHV7-81A0A0B4J1V7 117 aa14.1□□□□□ -0.15
CLSTN1-202ENST00000377298 SYS1-DBNDD2H3BUS1 97 aa14.1□□□□□ -0.15
CLSTN1-202ENST00000377298 ZNF114Q8NC26 417 aa14.1□□□□□ -0.15
CLSTN1-202ENST00000377298 AZU1P20160 251 aa14.1□□□□□ -0.15
CLSTN1-202ENST00000377298 HOXD3P31249 432 aaPredicted RBP14.1□□□□□ -0.15
CLSTN1-202ENST00000377298 WISP2O76076 250 aa14.09□□□□□ -0.15
CLSTN1-202ENST00000377298 MEGF9Q9H1U4 602 aa14.09□□□□□ -0.15
CLSTN1-202ENST00000377298 TYMSP04818 313 aa14.09□□□□□ -0.15
CLSTN1-202ENST00000377298 PAX2Q02962 417 aa14.09□□□□□ -0.15
CLSTN1-202ENST00000377298 VWC2Q2TAL6 325 aa14.09□□□□□ -0.15
CLSTN1-202ENST00000377298 PRORYQ9H606 182 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms