RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 ZNRF2Q8NHG8 242 aa10.54□□□□□ -0.72
VAPA-209ENST00000585042 LINC01587Q99440 93 aa10.54□□□□□ -0.72
VAPA-209ENST00000585042 PPP1R14DQ9NXH3 145 aa10.54□□□□□ -0.72
VAPA-209ENST00000585042 TIMM8BQ9Y5J9 83 aaPredicted RBP10.54□□□□□ -0.72
VAPA-209ENST00000585042 NBDYA0A0U1RRE5 68 aa10.53□□□□□ -0.72
VAPA-209ENST00000585042 F5H768 121 aa10.53□□□□□ -0.72
VAPA-209ENST00000585042 PRM2P04554 102 aa10.53□□□□□ -0.72
VAPA-209ENST00000585042 OR5G3P0C626 314 aa10.53□□□□□ -0.72
VAPA-209ENST00000585042 LINC00869P0C866 280 aa10.53□□□□□ -0.72
VAPA-209ENST00000585042 CXCL2P19875 107 aa10.53□□□□□ -0.72
VAPA-209ENST00000585042 AZU1P20160 251 aa10.53□□□□□ -0.72
VAPA-209ENST00000585042 RHOBP62745 196 aa10.53□□□□□ -0.72
VAPA-209ENST00000585042 LRRC37A5PQ49AS3 106 aa10.53□□□□□ -0.72
VAPA-209ENST00000585042 BAP18Q8IXM2 172 aa10.53□□□□□ -0.72
VAPA-209ENST00000585042 TMEM252Q8N6L7 170 aa10.53□□□□□ -0.72
VAPA-209ENST00000585042 LRRC20Q8TCA0 184 aa10.53□□□□□ -0.72
VAPA-209ENST00000585042 C16orf74Q96GX8 76 aa10.53□□□□□ -0.72
VAPA-209ENST00000585042 C20orf144Q9BQM9 153 aa10.53□□□□□ -0.72
VAPA-209ENST00000585042 UQCC1Q9NVA1 299 aa10.53□□□□□ -0.72
VAPA-209ENST00000585042 CDKN1BP46527 198 aa10.52□□□□□ -0.73
VAPA-209ENST00000585042 HIST1H1AQ02539 215 aaPredicted RBP10.52□□□□□ -0.73
VAPA-209ENST00000585042 ARL16Q0P5N6 197 aa10.52□□□□□ -0.73
VAPA-209ENST00000585042 RGS21Q2M5E4 152 aa10.52□□□□□ -0.73
VAPA-209ENST00000585042 ZNF575Q86XF7 245 aa10.52□□□□□ -0.73
VAPA-209ENST00000585042 C6orf223Q8N319 242 aa10.52□□□□□ -0.73
VAPA-209ENST00000585042 C11orf1Q9H5F2 150 aa10.52□□□□□ -0.73
VAPA-209ENST00000585042 TRAV12-2A0A075B6T6 113 aa10.51□□□□□ -0.73
VAPA-209ENST00000585042 AGPAT2O15120 278 aa10.51□□□□□ -0.73
VAPA-209ENST00000585042 CDK2AP2O75956 126 aa10.51□□□□□ -0.73
VAPA-209ENST00000585042 NUDT3O95989 172 aa10.51□□□□□ -0.73
VAPA-209ENST00000585042 H2BFSP57053 126 aa10.51□□□□□ -0.73
VAPA-209ENST00000585042 OR10J6PQ8NGY7 276 aa10.51□□□□□ -0.73
VAPA-209ENST00000585042 PPP1R1CQ8WVI7 109 aa10.51□□□□□ -0.73
VAPA-209ENST00000585042 MED28Q9H204 178 aa10.51□□□□□ -0.73
VAPA-209ENST00000585042 ALG5Q9Y673 324 aa10.51□□□□□ -0.73
VAPA-209ENST00000585042 IGSF23A1L1A6 192 aa10.5□□□□□ -0.73
VAPA-209ENST00000585042 H7BYZ3 331 aa10.5□□□□□ -0.73
VAPA-209ENST00000585042 MRPS12O15235 138 aaKnown RBP10.5□□□□□ -0.73
VAPA-209ENST00000585042 CAMLGP49069 296 aa10.5□□□□□ -0.73
VAPA-209ENST00000585042 BAXQ07812 192 aa10.5□□□□□ -0.73
VAPA-209ENST00000585042 FCN2Q15485 313 aa10.5□□□□□ -0.73
VAPA-209ENST00000585042 LCN15Q6UWW0 184 aa10.5□□□□□ -0.73
VAPA-209ENST00000585042 PATE2Q6UY27 113 aa10.5□□□□□ -0.73
VAPA-209ENST00000585042 Q6ZRG5 221 aa10.5□□□□□ -0.73
VAPA-209ENST00000585042 TMEM263Q8WUH6 116 aaKnown RBP10.5□□□□□ -0.73
VAPA-209ENST00000585042 RPUSD4Q96CM3 377 aaKnown RBP10.5□□□□□ -0.73
VAPA-209ENST00000585042 ZNF503Q96F45 646 aa10.5□□□□□ -0.73
VAPA-209ENST00000585042 UHRF2Q96PU4 802 aa10.5□□□□□ -0.73
VAPA-209ENST00000585042 SLC50A1Q9BRV3 221 aa10.5□□□□□ -0.73
VAPA-209ENST00000585042 ARL6Q9H0F7 186 aa10.5□□□□□ -0.73
VAPA-209ENST00000585042 ARV1Q9H2C2 271 aa10.5□□□□□ -0.73
VAPA-209ENST00000585042 MPDU1O75352 247 aa10.49□□□□□ -0.73
VAPA-209ENST00000585042 TNP2Q05952 138 aa10.49□□□□□ -0.73
VAPA-209ENST00000585042 VWC2Q2TAL6 325 aa10.49□□□□□ -0.73
VAPA-209ENST00000585042 RNASE8Q8TDE3 154 aaKnown RBP10.49□□□□□ -0.73
VAPA-209ENST00000585042 ZNF331Q9NQX6 463 aaPredicted RBP10.49□□□□□ -0.73
VAPA-209ENST00000585042 OR5AC2Q9NZP5 309 aa10.49□□□□□ -0.73
VAPA-209ENST00000585042 WDR83OSQ9Y284 106 aa10.49□□□□□ -0.73
VAPA-209ENST00000585042 LINC00588Q9Y4M8 146 aa10.49□□□□□ -0.73
VAPA-209ENST00000585042 UBE2L5PA0A1B0GUS4 154 aa10.48□□□□□ -0.73
VAPA-209ENST00000585042 C16orf90A8MZG2 172 aa10.48□□□□□ -0.73
VAPA-209ENST00000585042 COX7A2P2O60397 106 aa10.48□□□□□ -0.73
VAPA-209ENST00000585042 MPC2O95563 127 aa10.48□□□□□ -0.73
VAPA-209ENST00000585042 CLINT1Q14677 625 aa10.48□□□□□ -0.73
VAPA-209ENST00000585042 BPIFA4PQ86YQ2 179 aa10.48□□□□□ -0.73
VAPA-209ENST00000585042 DNAH11Q96DT5 4516 aa10.48□□□□□ -0.73
VAPA-209ENST00000585042 RYR1P21817 5038 aa10.47□□□□□ -0.73
VAPA-209ENST00000585042 H3BNG1 76 aa10.47□□□□□ -0.73
VAPA-209ENST00000585042 HTN1P15515 57 aa10.47□□□□□ -0.73
VAPA-209ENST00000585042 BTF3P20290 206 aaKnown RBP10.47□□□□□ -0.73
VAPA-209ENST00000585042 FGF7P21781 194 aa10.47□□□□□ -0.73
VAPA-209ENST00000585042 SSX7Q7RTT5 188 aa10.47□□□□□ -0.73
VAPA-209ENST00000585042 LINC00305Q7Z4B0 112 aa10.47□□□□□ -0.73
VAPA-209ENST00000585042 CCDC28AQ8IWP9 274 aa10.47□□□□□ -0.73
VAPA-209ENST00000585042 LINC00612Q8N6U2 182 aa10.47□□□□□ -0.73
VAPA-209ENST00000585042 OR5C1Q8NGR4 320 aa10.47□□□□□ -0.73
VAPA-209ENST00000585042 OR1L4Q8NGR5 311 aa10.47□□□□□ -0.73
VAPA-209ENST00000585042 THAP6Q8TBB0 222 aa10.47□□□□□ -0.73
VAPA-209ENST00000585042 RNF141Q8WVD5 230 aa10.47□□□□□ -0.73
VAPA-209ENST00000585042 ASB13Q8WXK3 278 aa10.47□□□□□ -0.73
VAPA-209ENST00000585042 PFDN5Q99471 154 aa10.47□□□□□ -0.73
VAPA-209ENST00000585042 MGST2Q99735 147 aa10.47□□□□□ -0.73
VAPA-209ENST00000585042 Q9H8V8 135 aa10.47□□□□□ -0.73
VAPA-209ENST00000585042 NOP10Q9NPE3 64 aaKnown RBP10.47□□□□□ -0.73
VAPA-209ENST00000585042 H0YIZ8 118 aa10.46□□□□□ -0.73
VAPA-209ENST00000585042 RPL29P47914 159 aaKnown RBP10.46□□□□□ -0.73
VAPA-209ENST00000585042 NHLH2Q02577 135 aa10.46□□□□□ -0.73
VAPA-209ENST00000585042 TTC32Q5I0X7 151 aa10.46□□□□□ -0.73
VAPA-209ENST00000585042 C10orf113Q5VZT2 155 aa10.46□□□□□ -0.73
VAPA-209ENST00000585042 RXFP4Q8TDU9 374 aa10.46□□□□□ -0.73
VAPA-209ENST00000585042 CHAC2Q8WUX2 184 aa10.46□□□□□ -0.73
VAPA-209ENST00000585042 DNAJC4Q9NNZ3 241 aa10.46□□□□□ -0.73
VAPA-209ENST00000585042 KCNIP2Q9NS61 270 aa10.46□□□□□ -0.73
VAPA-209ENST00000585042 PXMP4Q9Y6I8 212 aa10.46□□□□□ -0.73
VAPA-209ENST00000585042 DYNC1H1Q14204 4646 aaKnown RBP10.45□□□□□ -0.74
VAPA-209ENST00000585042 A0A1W2PPQ1 181 aa10.45□□□□□ -0.74
VAPA-209ENST00000585042 M6PRP20645 277 aa10.45□□□□□ -0.74
VAPA-209ENST00000585042 GUK1Q16774 197 aa10.45□□□□□ -0.74
VAPA-209ENST00000585042 GNPNAT1Q96EK6 184 aaPredicted RBP10.45□□□□□ -0.74
VAPA-209ENST00000585042 ODF3Q96PU9 254 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms