RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 UQCC1Q9NVA1 299 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 MBD2Q9UBB5 411 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 RNF24Q9Y225 148 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 A0A1W2PPQ1 181 aa6.74□□□□□ -1.33
HERC1-209ENST00000560519 ZNF705GA8MUZ8 300 aaPredicted RBP6.74□□□□□ -1.33
HERC1-209ENST00000560519 H0YIZ8 118 aa6.74□□□□□ -1.33
HERC1-209ENST00000560519 TAS2R60P59551 318 aa6.74□□□□□ -1.33
HERC1-209ENST00000560519 ARL16Q0P5N6 197 aa6.74□□□□□ -1.33
HERC1-209ENST00000560519 OR2F1Q13607 317 aa6.74□□□□□ -1.33
HERC1-209ENST00000560519 SSX7Q7RTT5 188 aa6.74□□□□□ -1.33
HERC1-209ENST00000560519 ZNF546Q86UE3 836 aa6.74□□□□□ -1.33
HERC1-209ENST00000560519 BAP18Q8IXM2 172 aa6.74□□□□□ -1.33
HERC1-209ENST00000560519 ZNF738Q8NE65 137 aa6.74□□□□□ -1.33
HERC1-209ENST00000560519 RNF141Q8WVD5 230 aa6.74□□□□□ -1.33
HERC1-209ENST00000560519 ZNF503Q96F45 646 aa6.74□□□□□ -1.33
HERC1-209ENST00000560519 Q9H3A6 140 aa6.74□□□□□ -1.33
HERC1-209ENST00000560519 PPP1R14DQ9NXH3 145 aa6.74□□□□□ -1.33
HERC1-209ENST00000560519 LINC00588Q9Y4M8 146 aa6.74□□□□□ -1.33
HERC1-209ENST00000560519 TIMM8BQ9Y5J9 83 aaPredicted RBP6.74□□□□□ -1.33
HERC1-209ENST00000560519 IGKV1OR2-108A0A075B7D4 117 aa6.73□□□□□ -1.33
HERC1-209ENST00000560519 ZNF98A6NK75 572 aa6.73□□□□□ -1.33
HERC1-209ENST00000560519 CRXO43186 299 aaPredicted RBP6.73□□□□□ -1.33
HERC1-209ENST00000560519 MPDU1O75352 247 aa6.73□□□□□ -1.33
HERC1-209ENST00000560519 RPL12P30050 165 aaKnown RBP6.73□□□□□ -1.33
HERC1-209ENST00000560519 VWC2Q2TAL6 325 aa6.73□□□□□ -1.33
HERC1-209ENST00000560519 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.73□□□□□ -1.33
HERC1-209ENST00000560519 ZNF493Q6ZR52 646 aa6.73□□□□□ -1.33
HERC1-209ENST00000560519 CYP2G1PQ6ZSU1 146 aa6.73□□□□□ -1.33
HERC1-209ENST00000560519 OR5C1Q8NGR4 320 aa6.73□□□□□ -1.33
HERC1-209ENST00000560519 OR2T35Q8NGX2 323 aa6.73□□□□□ -1.33
HERC1-209ENST00000560519 TMEM263Q8WUH6 116 aaKnown RBP6.73□□□□□ -1.33
HERC1-209ENST00000560519 GNPNAT1Q96EK6 184 aaPredicted RBP6.73□□□□□ -1.33
HERC1-209ENST00000560519 C20orf173Q96LM9 149 aa6.73□□□□□ -1.33
HERC1-209ENST00000560519 C20orf144Q9BQM9 153 aa6.73□□□□□ -1.33
HERC1-209ENST00000560519 UPK3BQ9BT76 320 aa6.73□□□□□ -1.33
HERC1-209ENST00000560519 Q9H8V8 135 aa6.73□□□□□ -1.33
HERC1-209ENST00000560519 UBE2L5PA0A1B0GUS4 154 aa6.72□□□□□ -1.33
HERC1-209ENST00000560519 PLAC8L1A1L4L8 177 aa6.72□□□□□ -1.33
HERC1-209ENST00000560519 H3BNG1 76 aa6.72□□□□□ -1.33
HERC1-209ENST00000560519 RPL7P18124 248 aaKnown RBP6.72□□□□□ -1.33
HERC1-209ENST00000560519 RHOBP62745 196 aa6.72□□□□□ -1.33
HERC1-209ENST00000560519 NHLH2Q02577 135 aa6.72□□□□□ -1.33
HERC1-209ENST00000560519 PXDC1Q5TGL8 231 aa6.72□□□□□ -1.33
HERC1-209ENST00000560519 Q6ZNX1 250 aa6.72□□□□□ -1.33
HERC1-209ENST00000560519 INO80EQ8NBZ0 244 aaPredicted RBP6.72□□□□□ -1.33
HERC1-209ENST00000560519 LINC01587Q99440 93 aa6.72□□□□□ -1.33
HERC1-209ENST00000560519 RSG1Q9BU20 258 aa6.72□□□□□ -1.33
HERC1-209ENST00000560519 KCNIP2Q9NS61 270 aa6.72□□□□□ -1.33
HERC1-209ENST00000560519 WDR83OSQ9Y284 106 aa6.72□□□□□ -1.33
HERC1-209ENST00000560519 HSPB11Q9Y547 144 aa6.72□□□□□ -1.33
HERC1-209ENST00000560519 TRAV12-2A0A075B6T6 113 aa6.71□□□□□ -1.34
HERC1-209ENST00000560519 FXYD6-FXYD2A0A087WZ82 144 aa6.71□□□□□ -1.34
HERC1-209ENST00000560519 EPM2AB3EWF7 344 aa6.71□□□□□ -1.34
HERC1-209ENST00000560519 AGPAT2O15120 278 aa6.71□□□□□ -1.34
HERC1-209ENST00000560519 HYPMO75409 117 aa6.71□□□□□ -1.34
HERC1-209ENST00000560519 IFNA5P01569 189 aa6.71□□□□□ -1.34
HERC1-209ENST00000560519 LINC00869P0C866 280 aa6.71□□□□□ -1.34
HERC1-209ENST00000560519 ORM2P19652 201 aa6.71□□□□□ -1.34
HERC1-209ENST00000560519 M6PRP20645 277 aa6.71□□□□□ -1.34
HERC1-209ENST00000560519 FGF7P21781 194 aa6.71□□□□□ -1.34
HERC1-209ENST00000560519 CDKN1BP46527 198 aa6.71□□□□□ -1.34
HERC1-209ENST00000560519 CAMLGP49069 296 aa6.71□□□□□ -1.34
HERC1-209ENST00000560519 HIST1H1AQ02539 215 aaPredicted RBP6.71□□□□□ -1.34
HERC1-209ENST00000560519 Q6ZRG5 221 aa6.71□□□□□ -1.34
HERC1-209ENST00000560519 RNASE8Q8TDE3 154 aaKnown RBP6.71□□□□□ -1.34
HERC1-209ENST00000560519 CHAC2Q8WUX2 184 aa6.71□□□□□ -1.34
HERC1-209ENST00000560519 AQP10Q96PS8 301 aa6.71□□□□□ -1.34
HERC1-209ENST00000560519 ATP5SQ99766 215 aa6.71□□□□□ -1.34
HERC1-209ENST00000560519 SLC25A39Q9BZJ4 359 aaPredicted RBP6.71□□□□□ -1.34
HERC1-209ENST00000560519 A0A087X0K7 114 aa6.7□□□□□ -1.34
HERC1-209ENST00000560519 C17orf112F2Z3M2 114 aa6.7□□□□□ -1.34
HERC1-209ENST00000560519 H3BRN7 92 aa6.7□□□□□ -1.34
HERC1-209ENST00000560519 H7BYZ3 331 aa6.7□□□□□ -1.34
HERC1-209ENST00000560519 EREGO14944 169 aa6.7□□□□□ -1.34
HERC1-209ENST00000560519 CXCL2P19875 107 aa6.7□□□□□ -1.34
HERC1-209ENST00000560519 PLP1P60201 277 aa6.7□□□□□ -1.34
HERC1-209ENST00000560519 CCDC28AQ8IWP9 274 aa6.7□□□□□ -1.34
HERC1-209ENST00000560519 RNF182Q8N6D2 247 aa6.7□□□□□ -1.34
HERC1-209ENST00000560519 OR8A1Q8NGG7 326 aa6.7□□□□□ -1.34
HERC1-209ENST00000560519 LRRC20Q8TCA0 184 aa6.7□□□□□ -1.34
HERC1-209ENST00000560519 SCGB1C1Q8TD33 95 aa6.7□□□□□ -1.34
HERC1-209ENST00000560519 RXFP4Q8TDU9 374 aa6.7□□□□□ -1.34
HERC1-209ENST00000560519 MGST2Q99735 147 aa6.7□□□□□ -1.34
HERC1-209ENST00000560519 HIGD1AQ9Y241 93 aa6.7□□□□□ -1.34
HERC1-209ENST00000560519 MRPS16Q9Y3D3 137 aaKnown RBP6.7□□□□□ -1.34
HERC1-209ENST00000560519 LRP1BQ9NZR2 4599 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 TRAV26-1A0A087WT03 109 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 TRAV8-2A0A0B4J237 113 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 SNURFLB1AK76 121 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 COX7A2P2O60397 106 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 OR5G3P0C626 314 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 HTN1P15515 57 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 AZU1P20160 251 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 GATA2P23769 480 aaPredicted RBP6.69□□□□□ -1.34
HERC1-209ENST00000560519 RPL29P47914 159 aaKnown RBP6.69□□□□□ -1.34
HERC1-209ENST00000560519 OR5I1Q13606 314 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 ZNF266Q14584 549 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 OPCMLQ14982 345 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 CDPF1Q6NVV7 123 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 OR1L4Q8NGR5 311 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms