RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 IGKV3-7A0A075B6H7 116 aa9.32□□□□□ -0.92
TPM1-209ENST00000558072 SOCS3O14543 225 aa9.32□□□□□ -0.92
TPM1-209ENST00000558072 CNN1P51911 297 aaKnown RBP9.32□□□□□ -0.92
TPM1-209ENST00000558072 EBLN2Q6P2I7 272 aa9.32□□□□□ -0.92
TPM1-209ENST00000558072 GTSCR1Q86UQ5 136 aa9.32□□□□□ -0.92
TPM1-209ENST00000558072 WFDC3Q8IUB2 231 aa9.32□□□□□ -0.92
TPM1-209ENST00000558072 CCDC28AQ8IWP9 274 aa9.32□□□□□ -0.92
TPM1-209ENST00000558072 GBGT1Q8N5D6 347 aa9.32□□□□□ -0.92
TPM1-209ENST00000558072 CYB561D1Q8N8Q1 229 aa9.32□□□□□ -0.92
TPM1-209ENST00000558072 ZNF738Q8NE65 137 aa9.32□□□□□ -0.92
TPM1-209ENST00000558072 OR10J6PQ8NGY7 276 aa9.32□□□□□ -0.92
TPM1-209ENST00000558072 C17orf77Q96MU5 243 aa9.32□□□□□ -0.92
TPM1-209ENST00000558072 YTHDF2Q9Y5A9 579 aaKnown RBP9.32□□□□□ -0.92
TPM1-209ENST00000558072 GGTLC3B5MD39 225 aa9.31□□□□□ -0.92
TPM1-209ENST00000558072 PEX7O00628 323 aa9.31□□□□□ -0.92
TPM1-209ENST00000558072 DUSP14O95147 198 aaKnown RBP9.31□□□□□ -0.92
TPM1-209ENST00000558072 TFPI2P48307 235 aa9.31□□□□□ -0.92
TPM1-209ENST00000558072 C11orf52Q96A22 123 aa9.31□□□□□ -0.92
TPM1-209ENST00000558072 LINC00052Q96N35 136 aa9.31□□□□□ -0.92
TPM1-209ENST00000558072 OR11H12B2RN74 326 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 DIRC3C9JPN6 131 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 H3BTX0 84 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 SLC17A3O00476 420 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 TCRAP04437 139 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 AKR1C3P42330 323 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 ATP5G3P48201 142 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 TAS2R60P59551 318 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 CD81P60033 236 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 UBE2G1P62253 170 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 BEAN1Q3B7T3 259 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 FOXI2Q6ZQN5 318 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 EXOC3-AS1Q8N2X6 119 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 SMIM12Q96EX1 92 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 FMC1Q96HJ9 113 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 LINC00477Q96M19 166 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 RARRES2Q99969 163 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 NDFIP1Q9BT67 221 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 BIN3Q9NQY0 253 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 CMYA5Q8N3K9 4069 aa9.3□□□□□ -0.92
TPM1-209ENST00000558072 TRAV8-2A0A0B4J237 113 aa9.29□□□□□ -0.92
TPM1-209ENST00000558072 TRBV7-9A0A0J9YWB2 115 aa9.29□□□□□ -0.92
TPM1-209ENST00000558072 TRBV6-1A0A0K0K1D8 114 aa9.29□□□□□ -0.92
TPM1-209ENST00000558072 SNRPCP09234 159 aaKnown RBP9.29□□□□□ -0.92
TPM1-209ENST00000558072 ZNF688P0C7X2 276 aa9.29□□□□□ -0.92
TPM1-209ENST00000558072 IGLL1P15814 213 aa9.29□□□□□ -0.92
TPM1-209ENST00000558072 PSMG4Q5JS54 123 aa9.29□□□□□ -0.92
TPM1-209ENST00000558072 SOHLH1Q5JUK2 328 aa9.29□□□□□ -0.92
TPM1-209ENST00000558072 TMEM78Q5T7P6 136 aa9.29□□□□□ -0.92
TPM1-209ENST00000558072 TMEM75Q8N9X5 138 aa9.29□□□□□ -0.92
TPM1-209ENST00000558072 ZNF256Q9Y2P7 627 aaPredicted RBP9.29□□□□□ -0.92
TPM1-209ENST00000558072 LENEPQ9Y5L5 61 aa9.29□□□□□ -0.92
TPM1-209ENST00000558072 KRBOX1C9JBD0 128 aa9.28□□□□□ -0.92
TPM1-209ENST00000558072 SRP19P09132 144 aaKnown RBP9.28□□□□□ -0.92
TPM1-209ENST00000558072 SAPCD1Q5SSQ6 148 aa9.28□□□□□ -0.92
TPM1-209ENST00000558072 CLUHP3Q96NS8 147 aa9.28□□□□□ -0.92
TPM1-209ENST00000558072 PPP1R14DQ9NXH3 145 aa9.28□□□□□ -0.92
TPM1-209ENST00000558072 ZFP30Q9Y2G7 519 aa9.28□□□□□ -0.92
TPM1-209ENST00000558072 KLF12Q9Y4X4 402 aa9.28□□□□□ -0.92
TPM1-209ENST00000558072 DEFB131AP59861 70 aa9.27□□□□□ -0.93
TPM1-209ENST00000558072 TMEM183BQ1AE95 376 aa9.27□□□□□ -0.93
TPM1-209ENST00000558072 C9orf47Q6ZRZ4 202 aa9.27□□□□□ -0.93
TPM1-209ENST00000558072 GOLT1AQ6ZVE7 132 aa9.27□□□□□ -0.93
TPM1-209ENST00000558072 RNF182Q8N6D2 247 aa9.27□□□□□ -0.93
TPM1-209ENST00000558072 OR8A1Q8NGG7 326 aa9.27□□□□□ -0.93
TPM1-209ENST00000558072 RPH3ALQ9UNE2 315 aa9.27□□□□□ -0.93
TPM1-209ENST00000558072 LY96Q9Y6Y9 160 aa9.27□□□□□ -0.93
TPM1-209ENST00000558072 VWFP04275 2813 aa9.26□□□□□ -0.93
TPM1-209ENST00000558072 SCO2A0A1W2PP80 73 aa9.26□□□□□ -0.93
TPM1-209ENST00000558072 TMEM218A2RU14 115 aa9.26□□□□□ -0.93
TPM1-209ENST00000558072 ZNF727A8MUV8 499 aa9.26□□□□□ -0.93
TPM1-209ENST00000558072 C9JCJ5 164 aa9.26□□□□□ -0.93
TPM1-209ENST00000558072 M0R3E3 92 aa9.26□□□□□ -0.93
TPM1-209ENST00000558072 TSPOP30536 169 aa9.26□□□□□ -0.93
TPM1-209ENST00000558072 NUTF2P61970 127 aaKnown RBP9.26□□□□□ -0.93
TPM1-209ENST00000558072 OXLD1Q5BKU9 147 aa9.26□□□□□ -0.93
TPM1-209ENST00000558072 C2CD4CQ8TF44 421 aa9.26□□□□□ -0.93
TPM1-209ENST00000558072 ODF3Q96PU9 254 aa9.26□□□□□ -0.93
TPM1-209ENST00000558072 SAV1Q9H4B6 383 aaPredicted RBP9.26□□□□□ -0.93
TPM1-209ENST00000558072 MAP6D1Q9H9H5 199 aa9.26□□□□□ -0.93
TPM1-209ENST00000558072 IZUMO1RA6ND01 250 aa9.25□□□□□ -0.93
TPM1-209ENST00000558072 NPIPB6E9PJ23 425 aa9.25□□□□□ -0.93
TPM1-209ENST00000558072 AMBPP02760 352 aa9.25□□□□□ -0.93
TPM1-209ENST00000558072 SFTA3P0C7M3 94 aa9.25□□□□□ -0.93
TPM1-209ENST00000558072 RPL35P42766 123 aaKnown RBP9.25□□□□□ -0.93
TPM1-209ENST00000558072 GNG4P50150 75 aa9.25□□□□□ -0.93
TPM1-209ENST00000558072 ZNF138P52744 262 aa9.25□□□□□ -0.93
TPM1-209ENST00000558072 CEBPGP53567 150 aa9.25□□□□□ -0.93
TPM1-209ENST00000558072 FLI1Q01543 452 aaPredicted RBP9.25□□□□□ -0.93
TPM1-209ENST00000558072 EGFEM1PQ0D2K5 195 aa9.25□□□□□ -0.93
TPM1-209ENST00000558072 PNRC1Q12796 327 aaPredicted RBP9.25□□□□□ -0.93
TPM1-209ENST00000558072 STHQ8IWL8 128 aa9.25□□□□□ -0.93
TPM1-209ENST00000558072 CITED4Q96RK1 184 aa9.25□□□□□ -0.93
TPM1-209ENST00000558072 SMIM7Q9BQ49 75 aa9.25□□□□□ -0.93
TPM1-209ENST00000558072 NIPSNAP3BQ9BS92 247 aa9.25□□□□□ -0.93
TPM1-209ENST00000558072 SEC11CQ9BY50 192 aa9.25□□□□□ -0.93
TPM1-209ENST00000558072 PARLQ9H300 379 aa9.25□□□□□ -0.93
TPM1-209ENST00000558072 PSG8Q9UQ74 426 aa9.25□□□□□ -0.93
TPM1-209ENST00000558072 A0A0J9YX75 114 aa9.24□□□□□ -0.93
TPM1-209ENST00000558072 ZNF705FA8MVS1 300 aaPredicted RBP9.24□□□□□ -0.93
TPM1-209ENST00000558072 F8W036 122 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms