RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 CCDC28AQ8IWP9 274 aa6.94□□□□□ -1.3
ACTN1-218ENST00000556343 TMEM61Q8N0U2 210 aa6.94□□□□□ -1.3
ACTN1-218ENST00000556343 EXOC3-AS1Q8N2X6 119 aa6.94□□□□□ -1.3
ACTN1-218ENST00000556343 ZNF738Q8NE65 137 aa6.94□□□□□ -1.3
ACTN1-218ENST00000556343 ATG101Q9BSB4 218 aa6.94□□□□□ -1.3
ACTN1-218ENST00000556343 GGTLC3B5MD39 225 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 SLC17A3O00476 420 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 PEX7O00628 323 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 DUSP14O95147 198 aaKnown RBP6.93□□□□□ -1.3
ACTN1-218ENST00000556343 SRP19P09132 144 aaKnown RBP6.93□□□□□ -1.3
ACTN1-218ENST00000556343 CEBPGP53567 150 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 TAS2R60P59551 318 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 CD81P60033 236 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 UBE2G1P62253 170 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 KRTAP21-3Q3LHN1 58 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 SOHLH1Q5JUK2 328 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 CYB561D1Q8N8Q1 229 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 OR10J6PQ8NGY7 276 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 SPATA3Q8NHX4 192 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 DCANP1Q8TF63 244 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 CITED4Q96RK1 184 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 MDFIQ99750 246 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 PPP1R14DQ9NXH3 145 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 RPH3ALQ9UNE2 315 aa6.93□□□□□ -1.3
ACTN1-218ENST00000556343 TRAV8-2A0A0B4J237 113 aa6.92□□□□□ -1.3
ACTN1-218ENST00000556343 RBAKDNA6NC62 111 aa6.92□□□□□ -1.3
ACTN1-218ENST00000556343 KRBOX1C9JBD0 128 aa6.92□□□□□ -1.3
ACTN1-218ENST00000556343 DIRC3C9JPN6 131 aa6.92□□□□□ -1.3
ACTN1-218ENST00000556343 SOCS3O14543 225 aa6.92□□□□□ -1.3
ACTN1-218ENST00000556343 TCRAP04437 139 aa6.92□□□□□ -1.3
ACTN1-218ENST00000556343 PSMG4Q5JS54 123 aa6.92□□□□□ -1.3
ACTN1-218ENST00000556343 GTSCR1Q86UQ5 136 aa6.92□□□□□ -1.3
ACTN1-218ENST00000556343 SLC7A5P1Q8MH63 180 aa6.92□□□□□ -1.3
ACTN1-218ENST00000556343 C11orf52Q96A22 123 aa6.92□□□□□ -1.3
ACTN1-218ENST00000556343 FMC1Q96HJ9 113 aa6.92□□□□□ -1.3
ACTN1-218ENST00000556343 NDFIP1Q9BT67 221 aa6.92□□□□□ -1.3
ACTN1-218ENST00000556343 SELENOKQ9Y6D0 94 aa6.92□□□□□ -1.3
ACTN1-218ENST00000556343 SCO2A0A1W2PP80 73 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 TMEM218A2RU14 115 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 OR11H12B2RN74 326 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 F8W036 122 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 SFTA3P0C7M3 94 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 ZNF688P0C7X2 276 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 IGLL1P15814 213 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 ZNF674Q2M3X9 581 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 SAPCD1Q5SSQ6 148 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 TMEM78Q5T7P6 136 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 IGFL4Q6B9Z1 124 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 FOXI2Q6ZQN5 318 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 GOLT1AQ6ZVE7 132 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 RNF182Q8N6D2 247 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 TMEM75Q8N9X5 138 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 LINC00477Q96M19 166 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 FAM110AQ9BQ89 295 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 BIN3Q9NQY0 253 aa6.91□□□□□ -1.3
ACTN1-218ENST00000556343 ANK2Q01484 3957 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 TENM1Q9UKZ4 2725 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 TRBV6-1A0A0K0K1D8 114 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 ZNF727A8MUV8 499 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 M0R3E3 92 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 WIPF1O43516 503 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 HLA-DMBP28068 263 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 DEFB131AP59861 70 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 GNG5P63218 68 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 SRSF3P84103 164 aaKnown RBP6.9□□□□□ -1.3
ACTN1-218ENST00000556343 TMEM183BQ1AE95 376 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 BEAN1Q3B7T3 259 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 OR8A1Q8NGG7 326 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 SMIM7Q9BQ49 75 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 NIPSNAP3BQ9BS92 247 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 SEC11CQ9BY50 192 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 PSG8Q9UQ74 426 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 ZFP30Q9Y2G7 519 aa6.9□□□□□ -1.3
ACTN1-218ENST00000556343 ZNF256Q9Y2P7 627 aaPredicted RBP6.9□□□□□ -1.3
ACTN1-218ENST00000556343 IZUMO1RA6ND01 250 aa6.89□□□□□ -1.31
ACTN1-218ENST00000556343 ZNF705FA8MVS1 300 aaPredicted RBP6.89□□□□□ -1.31
ACTN1-218ENST00000556343 RPL35P42766 123 aaKnown RBP6.89□□□□□ -1.31
ACTN1-218ENST00000556343 GNG4P50150 75 aa6.89□□□□□ -1.31
ACTN1-218ENST00000556343 FLI1Q01543 452 aaPredicted RBP6.89□□□□□ -1.31
ACTN1-218ENST00000556343 HIST1H1AQ02539 215 aaPredicted RBP6.89□□□□□ -1.31
ACTN1-218ENST00000556343 TMEM241Q24JQ0 296 aa6.89□□□□□ -1.31
ACTN1-218ENST00000556343 C9orf47Q6ZRZ4 202 aa6.89□□□□□ -1.31
ACTN1-218ENST00000556343 PRNTQ86SH4 94 aa6.89□□□□□ -1.31
ACTN1-218ENST00000556343 BAGE2Q86Y30 109 aa6.89□□□□□ -1.31
ACTN1-218ENST00000556343 C2CD4CQ8TF44 421 aa6.89□□□□□ -1.31
ACTN1-218ENST00000556343 SMIM12Q96EX1 92 aa6.89□□□□□ -1.31
ACTN1-218ENST00000556343 C20orf173Q96LM9 149 aa6.89□□□□□ -1.31
ACTN1-218ENST00000556343 PARLQ9H300 379 aa6.89□□□□□ -1.31
ACTN1-218ENST00000556343 NAT8Q9UHE5 227 aa6.89□□□□□ -1.31
ACTN1-218ENST00000556343 KLF12Q9Y4X4 402 aa6.89□□□□□ -1.31
ACTN1-218ENST00000556343 LENEPQ9Y5L5 61 aa6.89□□□□□ -1.31
ACTN1-218ENST00000556343 LY96Q9Y6Y9 160 aa6.89□□□□□ -1.31
ACTN1-218ENST00000556343 TRBV7-9A0A0J9YWB2 115 aa6.88□□□□□ -1.31
ACTN1-218ENST00000556343 C9JCJ5 164 aa6.88□□□□□ -1.31
ACTN1-218ENST00000556343 C9JQL5 133 aa6.88□□□□□ -1.31
ACTN1-218ENST00000556343 CT45A10P0DMU9 189 aa6.88□□□□□ -1.31
ACTN1-218ENST00000556343 S100A1P23297 94 aa6.88□□□□□ -1.31
ACTN1-218ENST00000556343 TSPOP30536 169 aa6.88□□□□□ -1.31
ACTN1-218ENST00000556343 ZNF138P52744 262 aa6.88□□□□□ -1.31
ACTN1-218ENST00000556343 STHQ8IWL8 128 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms