RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 ATG101Q9BSB4 218 aa10.88□□□□□ -0.67
SHMT2-210ENST00000553950 SORL1Q92673 2214 aa10.88□□□□□ -0.67
SHMT2-210ENST00000553950 SNRPCP09234 159 aaKnown RBP10.87□□□□□ -0.67
SHMT2-210ENST00000553950 ZNF688P0C7X2 276 aa10.87□□□□□ -0.67
SHMT2-210ENST00000553950 ATP5G3P48201 142 aa10.87□□□□□ -0.67
SHMT2-210ENST00000553950 SUMO1P63165 101 aaKnown RBP10.87□□□□□ -0.67
SHMT2-210ENST00000553950 COMMD7Q86VX2 200 aa10.87□□□□□ -0.67
SHMT2-210ENST00000553950 WFDC3Q8IUB2 231 aa10.87□□□□□ -0.67
SHMT2-210ENST00000553950 EXOC3-AS1Q8N2X6 119 aa10.87□□□□□ -0.67
SHMT2-210ENST00000553950 ZNF256Q9Y2P7 627 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-210ENST00000553950 TRAV8-2A0A0B4J237 113 aa10.86□□□□□ -0.67
SHMT2-210ENST00000553950 RBAKDNA6NC62 111 aa10.86□□□□□ -0.67
SHMT2-210ENST00000553950 OR11H12B2RN74 326 aa10.86□□□□□ -0.67
SHMT2-210ENST00000553950 PEX7O00628 323 aa10.86□□□□□ -0.67
SHMT2-210ENST00000553950 S100A9P06702 114 aaKnown RBP10.86□□□□□ -0.67
SHMT2-210ENST00000553950 BEAN1Q3B7T3 259 aa10.86□□□□□ -0.67
SHMT2-210ENST00000553950 PSMG4Q5JS54 123 aa10.86□□□□□ -0.67
SHMT2-210ENST00000553950 CCDC28AQ8IWP9 274 aa10.86□□□□□ -0.67
SHMT2-210ENST00000553950 EIF4E3Q8N5X7 224 aaKnown RBP10.86□□□□□ -0.67
SHMT2-210ENST00000553950 CYB561D1Q8N8Q1 229 aa10.86□□□□□ -0.67
SHMT2-210ENST00000553950 C11orf52Q96A22 123 aa10.86□□□□□ -0.67
SHMT2-210ENST00000553950 LINC00052Q96N35 136 aa10.86□□□□□ -0.67
SHMT2-210ENST00000553950 EPDR1Q9UM22 224 aa10.86□□□□□ -0.67
SHMT2-210ENST00000553950 IZUMO1RA6ND01 250 aa10.85□□□□□ -0.67
SHMT2-210ENST00000553950 TCRAP04437 139 aa10.85□□□□□ -0.67
SHMT2-210ENST00000553950 AKR1C3P42330 323 aa10.85□□□□□ -0.67
SHMT2-210ENST00000553950 CNN1P51911 297 aaKnown RBP10.85□□□□□ -0.67
SHMT2-210ENST00000553950 EBLN2Q6P2I7 272 aa10.85□□□□□ -0.67
SHMT2-210ENST00000553950 FOXI2Q6ZQN5 318 aa10.85□□□□□ -0.67
SHMT2-210ENST00000553950 RNF182Q8N6D2 247 aa10.85□□□□□ -0.67
SHMT2-210ENST00000553950 OR10J6PQ8NGY7 276 aa10.85□□□□□ -0.67
SHMT2-210ENST00000553950 MAP6D1Q9H9H5 199 aa10.85□□□□□ -0.67
SHMT2-210ENST00000553950 SELENOKQ9Y6D0 94 aa10.85□□□□□ -0.67
SHMT2-210ENST00000553950 DIRC3C9JPN6 131 aa10.84□□□□□ -0.67
SHMT2-210ENST00000553950 CD81P60033 236 aa10.84□□□□□ -0.67
SHMT2-210ENST00000553950 TMEM75Q8N9X5 138 aa10.84□□□□□ -0.67
SHMT2-210ENST00000553950 FMC1Q96HJ9 113 aa10.84□□□□□ -0.67
SHMT2-210ENST00000553950 TREM1Q9NP99 234 aa10.84□□□□□ -0.67
SHMT2-210ENST00000553950 RPH3ALQ9UNE2 315 aa10.84□□□□□ -0.67
SHMT2-210ENST00000553950 NOTCH3Q9UM47 2321 aa10.83□□□□□ -0.68
SHMT2-210ENST00000553950 SCO2A0A1W2PP80 73 aa10.83□□□□□ -0.68
SHMT2-210ENST00000553950 M0R3E3 92 aa10.83□□□□□ -0.68
SHMT2-210ENST00000553950 DUSP14O95147 198 aaKnown RBP10.83□□□□□ -0.68
SHMT2-210ENST00000553950 DEFB131AP59861 70 aa10.83□□□□□ -0.68
SHMT2-210ENST00000553950 UBE2G1P62253 170 aa10.83□□□□□ -0.68
SHMT2-210ENST00000553950 EGFEM1PQ0D2K5 195 aa10.83□□□□□ -0.68
SHMT2-210ENST00000553950 SLC35B3Q9H1N7 401 aa10.83□□□□□ -0.68
SHMT2-210ENST00000553950 ODF3L2Q3SX64 289 aa10.82□□□□□ -0.68
SHMT2-210ENST00000553950 FAM74A3Q4VXF1 159 aa10.82□□□□□ -0.68
SHMT2-210ENST00000553950 TMEM78Q5T7P6 136 aa10.82□□□□□ -0.68
SHMT2-210ENST00000553950 SAMD5Q5TGI4 173 aa10.82□□□□□ -0.68
SHMT2-210ENST00000553950 GOLT1AQ6ZVE7 132 aa10.82□□□□□ -0.68
SHMT2-210ENST00000553950 OR8A1Q8NGG7 326 aa10.82□□□□□ -0.68
SHMT2-210ENST00000553950 RARRES2Q99969 163 aa10.82□□□□□ -0.68
SHMT2-210ENST00000553950 NDFIP1Q9BT67 221 aa10.82□□□□□ -0.68
SHMT2-210ENST00000553950 SAV1Q9H4B6 383 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-210ENST00000553950 HLA-DRB4P13762 266 aa10.81□□□□□ -0.68
SHMT2-210ENST00000553950 HLA-DMBP28068 263 aa10.81□□□□□ -0.68
SHMT2-210ENST00000553950 GNG5P63218 68 aa10.81□□□□□ -0.68
SHMT2-210ENST00000553950 IGFL4Q6B9Z1 124 aa10.81□□□□□ -0.68
SHMT2-210ENST00000553950 FAM24BQ8N5W8 94 aa10.81□□□□□ -0.68
SHMT2-210ENST00000553950 C2CD4CQ8TF44 421 aa10.81□□□□□ -0.68
SHMT2-210ENST00000553950 SMIM12Q96EX1 92 aa10.81□□□□□ -0.68
SHMT2-210ENST00000553950 C20orf173Q96LM9 149 aa10.81□□□□□ -0.68
SHMT2-210ENST00000553950 ODF3Q96PU9 254 aa10.81□□□□□ -0.68
SHMT2-210ENST00000553950 LENEPQ9Y5L5 61 aa10.81□□□□□ -0.68
SHMT2-210ENST00000553950 HLA-DRB4X5D2U9 266 aa10.81□□□□□ -0.68
SHMT2-210ENST00000553950 TRBV7-9A0A0J9YWB2 115 aa10.8□□□□□ -0.68
SHMT2-210ENST00000553950 A0A0J9YX75 114 aa10.8□□□□□ -0.68
SHMT2-210ENST00000553950 TRBV6-1A0A0K0K1D8 114 aa10.8□□□□□ -0.68
SHMT2-210ENST00000553950 NPIPB6E9PJ23 425 aa10.8□□□□□ -0.68
SHMT2-210ENST00000553950 SRP19P09132 144 aaKnown RBP10.8□□□□□ -0.68
SHMT2-210ENST00000553950 TAS2R60P59551 318 aa10.8□□□□□ -0.68
SHMT2-210ENST00000553950 HIST1H1AQ02539 215 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-210ENST00000553950 TMEM183BQ1AE95 376 aa10.8□□□□□ -0.68
SHMT2-210ENST00000553950 OXLD1Q5BKU9 147 aa10.8□□□□□ -0.68
SHMT2-210ENST00000553950 C9orf47Q6ZRZ4 202 aa10.8□□□□□ -0.68
SHMT2-210ENST00000553950 LINC00477Q96M19 166 aa10.8□□□□□ -0.68
SHMT2-210ENST00000553950 CLUHP3Q96NS8 147 aa10.8□□□□□ -0.68
SHMT2-210ENST00000553950 IGKV2-40A0A087WW87 121 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-210ENST00000553950 IGKV2D-40P01614 121 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-210ENST00000553950 FLI1Q01543 452 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-210ENST00000553950 Q86TA4 180 aa10.79□□□□□ -0.68
SHMT2-210ENST00000553950 STHQ8IWL8 128 aa10.79□□□□□ -0.68
SHMT2-210ENST00000553950 PARLQ9H300 379 aa10.79□□□□□ -0.68
SHMT2-210ENST00000553950 PPP1R14DQ9NXH3 145 aa10.79□□□□□ -0.68
SHMT2-210ENST00000553950 KLF12Q9Y4X4 402 aa10.79□□□□□ -0.68
SHMT2-210ENST00000553950 TRRAPQ9Y4A5 3859 aa10.78□□□□□ -0.68
SHMT2-210ENST00000553950 ZNF705FA8MVS1 300 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-210ENST00000553950 C9JCJ5 164 aa10.78□□□□□ -0.68
SHMT2-210ENST00000553950 CD7P09564 240 aa10.78□□□□□ -0.68
SHMT2-210ENST00000553950 SFTA3P0C7M3 94 aa10.78□□□□□ -0.68
SHMT2-210ENST00000553950 RPL35P42766 123 aaKnown RBP10.78□□□□□ -0.68
SHMT2-210ENST00000553950 ZNF138P52744 262 aa10.78□□□□□ -0.68
SHMT2-210ENST00000553950 CEBPGP53567 150 aa10.78□□□□□ -0.68
SHMT2-210ENST00000553950 SOHLH1Q5JUK2 328 aa10.78□□□□□ -0.68
SHMT2-210ENST00000553950 SAPCD1Q5SSQ6 148 aa10.78□□□□□ -0.68
SHMT2-210ENST00000553950 SMIM7Q9BQ49 75 aa10.78□□□□□ -0.68
SHMT2-210ENST00000553950 BIN3Q9NQY0 253 aa10.78□□□□□ -0.68
SHMT2-210ENST00000553950 ZFP30Q9Y2G7 519 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms