RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 TRGC2P03986 189 aa11.74□□□□□ -0.53
DDB1-216ENST00000539739 PLP1P60201 277 aa11.74□□□□□ -0.53
DDB1-216ENST00000539739 PSG3Q16557 428 aa11.74□□□□□ -0.53
DDB1-216ENST00000539739 WDR73Q6P4I2 378 aa11.74□□□□□ -0.53
DDB1-216ENST00000539739 OR1B1Q8NGR6 318 aa11.74□□□□□ -0.53
DDB1-216ENST00000539739 RSG1Q9BU20 258 aa11.74□□□□□ -0.53
DDB1-216ENST00000539739 SLC39A9Q9NUM3 307 aa11.74□□□□□ -0.53
DDB1-216ENST00000539739 A0A1W2PS18 150 aa11.73□□□□□ -0.53
DDB1-216ENST00000539739 HYPMO75409 117 aa11.73□□□□□ -0.53
DDB1-216ENST00000539739 CSN3P07498 182 aa11.73□□□□□ -0.53
DDB1-216ENST00000539739 CBLN1P23435 193 aa11.73□□□□□ -0.53
DDB1-216ENST00000539739 CRYBB3P26998 211 aa11.73□□□□□ -0.53
DDB1-216ENST00000539739 PRR20EP86478 221 aa11.73□□□□□ -0.53
DDB1-216ENST00000539739 PRR20CP86479 221 aa11.73□□□□□ -0.53
DDB1-216ENST00000539739 PRR20DP86480 221 aa11.73□□□□□ -0.53
DDB1-216ENST00000539739 PRR20BP86481 221 aa11.73□□□□□ -0.53
DDB1-216ENST00000539739 PRR20AP86496 221 aa11.73□□□□□ -0.53
DDB1-216ENST00000539739 C9orf66Q5T8R8 295 aa11.73□□□□□ -0.53
DDB1-216ENST00000539739 FRZBQ92765 325 aa11.73□□□□□ -0.53
DDB1-216ENST00000539739 GNPNAT1Q96EK6 184 aaPredicted RBP11.73□□□□□ -0.53
DDB1-216ENST00000539739 SIGLEC8Q9NYZ4 499 aa11.73□□□□□ -0.53
DDB1-216ENST00000539739 TIMM9Q9Y5J7 89 aa11.73□□□□□ -0.53
DDB1-216ENST00000539739 IGHV7-4-1A0A0J9YVY3 117 aa11.72□□□□□ -0.53
DDB1-216ENST00000539739 K7ERU9 68 aa11.72□□□□□ -0.53
DDB1-216ENST00000539739 OR5G3P0C626 314 aa11.72□□□□□ -0.53
DDB1-216ENST00000539739 SEC11BP0C7V7 166 aa11.72□□□□□ -0.53
DDB1-216ENST00000539739 C8orf88P0DMB2 117 aa11.72□□□□□ -0.53
DDB1-216ENST00000539739 INSL3P51460 131 aa11.72□□□□□ -0.53
DDB1-216ENST00000539739 PNRC1Q12796 327 aaPredicted RBP11.72□□□□□ -0.53
DDB1-216ENST00000539739 ZNF705AQ6ZN79 300 aaPredicted RBP11.72□□□□□ -0.53
DDB1-216ENST00000539739 OR1L4Q8NGR5 311 aa11.72□□□□□ -0.53
DDB1-216ENST00000539739 DYNLRB2Q8TF09 96 aa11.72□□□□□ -0.53
DDB1-216ENST00000539739 IMMP2LQ96T52 175 aa11.72□□□□□ -0.53
DDB1-216ENST00000539739 SMPXQ9UHP9 88 aa11.72□□□□□ -0.53
DDB1-216ENST00000539739 HIGD1AQ9Y241 93 aa11.72□□□□□ -0.53
DDB1-216ENST00000539739 COX7A2P2O60397 106 aa11.71□□□□□ -0.53
DDB1-216ENST00000539739 ATP6V0CP27449 155 aa11.71□□□□□ -0.53
DDB1-216ENST00000539739 GRAMD2BQ96HH9 432 aa11.71□□□□□ -0.53
DDB1-216ENST00000539739 PSMG3Q9BT73 122 aaPredicted RBP11.71□□□□□ -0.53
DDB1-216ENST00000539739 CTDSP1Q9GZU7 261 aa11.71□□□□□ -0.53
DDB1-216ENST00000539739 SRD5A3Q9H8P0 318 aa11.71□□□□□ -0.53
DDB1-216ENST00000539739 VWFP04275 2813 aa11.71□□□□□ -0.53
DDB1-216ENST00000539739 IGHV3-49A0A0A0MS15 119 aa11.71□□□□□ -0.54
DDB1-216ENST00000539739 CCL25O15444 150 aa11.71□□□□□ -0.54
DDB1-216ENST00000539739 CXCL1P09341 107 aa11.71□□□□□ -0.54
DDB1-216ENST00000539739 TAGLN2P37802 199 aaKnown RBP11.71□□□□□ -0.54
DDB1-216ENST00000539739 CDC34P49427 236 aaPredicted RBP11.71□□□□□ -0.54
DDB1-216ENST00000539739 FFAR4Q5NUL3 377 aa11.71□□□□□ -0.54
DDB1-216ENST00000539739 GBGT1Q8N5D6 347 aa11.71□□□□□ -0.54
DDB1-216ENST00000539739 ZNF738Q8NE65 137 aa11.71□□□□□ -0.54
DDB1-216ENST00000539739 TVP23CQ96ET8 276 aa11.71□□□□□ -0.54
DDB1-216ENST00000539739 RHPN1-AS1Q9BWJ2 59 aa11.71□□□□□ -0.54
DDB1-216ENST00000539739 TECRQ9NZ01 308 aaKnown RBP11.71□□□□□ -0.54
DDB1-216ENST00000539739 NOTCH3Q9UM47 2321 aa11.7□□□□□ -0.54
DDB1-216ENST00000539739 F6UZH7 168 aa11.7□□□□□ -0.54
DDB1-216ENST00000539739 IGLL1P15814 213 aa11.7□□□□□ -0.54
DDB1-216ENST00000539739 EDN2P20800 178 aa11.7□□□□□ -0.54
DDB1-216ENST00000539739 SERF2P84101 59 aa11.7□□□□□ -0.54
DDB1-216ENST00000539739 PDZD11Q5EBL8 140 aa11.7□□□□□ -0.54
DDB1-216ENST00000539739 C10orf113Q5VZT2 155 aa11.7□□□□□ -0.54
DDB1-216ENST00000539739 OR10G4Q8NGN3 311 aa11.7□□□□□ -0.54
DDB1-216ENST00000539739 GATAD1Q8WUU5 269 aa11.7□□□□□ -0.54
DDB1-216ENST00000539739 EIF5A2Q9GZV4 153 aaKnown RBP11.7□□□□□ -0.54
DDB1-216ENST00000539739 NAGKQ9UJ70 344 aa11.7□□□□□ -0.54
DDB1-216ENST00000539739 RNF24Q9Y225 148 aa11.7□□□□□ -0.54
DDB1-216ENST00000539739 IGHV3OR16-13A0A075B7E8 117 aa11.69□□□□□ -0.54
DDB1-216ENST00000539739 IGHV3-74A0A0B4J1X5 117 aa11.69□□□□□ -0.54
DDB1-216ENST00000539739 CHEK1O14757 476 aa11.69□□□□□ -0.54
DDB1-216ENST00000539739 STAG3L3P0CL85 134 aa11.69□□□□□ -0.54
DDB1-216ENST00000539739 FGF8P55075 233 aaPredicted RBP11.69□□□□□ -0.54
DDB1-216ENST00000539739 TMEM183BQ1AE95 376 aa11.69□□□□□ -0.54
DDB1-216ENST00000539739 ACOT6Q3I5F7 207 aaPredicted RBP11.69□□□□□ -0.54
DDB1-216ENST00000539739 ADAMTSL5Q6ZMM2 481 aa11.69□□□□□ -0.54
DDB1-216ENST00000539739 RPUSD4Q96CM3 377 aaKnown RBP11.69□□□□□ -0.54
DDB1-216ENST00000539739 SLC25A39Q9BZJ4 359 aaPredicted RBP11.69□□□□□ -0.54
DDB1-216ENST00000539739 VSIRQ9H7M9 311 aa11.69□□□□□ -0.54
DDB1-216ENST00000539739 U3KQE9 123 aa11.69□□□□□ -0.54
DDB1-216ENST00000539739 BUB3O43684 328 aa11.68□□□□□ -0.54
DDB1-216ENST00000539739 APOHP02749 345 aaPredicted RBP11.68□□□□□ -0.54
DDB1-216ENST00000539739 RNF151Q2KHN1 245 aa11.68□□□□□ -0.54
DDB1-216ENST00000539739 PATE2Q6UY27 113 aa11.68□□□□□ -0.54
DDB1-216ENST00000539739 LINC00305Q7Z4B0 112 aa11.68□□□□□ -0.54
DDB1-216ENST00000539739 OR2G3Q8NGZ4 309 aa11.68□□□□□ -0.54
DDB1-216ENST00000539739 TMEM37Q8WXS4 190 aa11.68□□□□□ -0.54
DDB1-216ENST00000539739 IGHV3-66A0A0C4DH42 116 aa11.68□□□□□ -0.54
DDB1-216ENST00000539739 DEFB114Q30KQ6 69 aa11.68□□□□□ -0.54
DDB1-216ENST00000539739 BTF3L4Q96K17 158 aa11.68□□□□□ -0.54
DDB1-216ENST00000539739 UHRF2Q96PU4 802 aa11.68□□□□□ -0.54
DDB1-216ENST00000539739 SHANK2-AS3Q9BTD1 123 aa11.68□□□□□ -0.54
DDB1-216ENST00000539739 SH3BGRL3Q9H299 93 aa11.68□□□□□ -0.54
DDB1-216ENST00000539739 RFNGQ9Y644 331 aa11.68□□□□□ -0.54
DDB1-216ENST00000539739 A0A1B0GV72 72 aa11.67□□□□□ -0.54
DDB1-216ENST00000539739 H3BQ15 152 aa11.67□□□□□ -0.54
DDB1-216ENST00000539739 H3BRN7 92 aa11.67□□□□□ -0.54
DDB1-216ENST00000539739 IGLV1-51P01701 117 aa11.67□□□□□ -0.54
DDB1-216ENST00000539739 OCIAD2Q56VL3 154 aa11.67□□□□□ -0.54
DDB1-216ENST00000539739 OR8I2Q8N0Y5 310 aa11.67□□□□□ -0.54
DDB1-216ENST00000539739 OR4C5Q8NGB2 326 aa11.67□□□□□ -0.54
DDB1-216ENST00000539739 OR2K2Q8NGT1 345 aa11.67□□□□□ -0.54
DDB1-216ENST00000539739 SLC25A22Q9H936 323 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms