RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	NDUFA5	Q16718	116 aa		10.14	□□□□□ -0.79
APTX-231	ENST00000494973	HAGH	Q16775	308 aa		10.14	□□□□□ -0.79
APTX-231	ENST00000494973	PSMG4	Q5JS54	123 aa		10.14	□□□□□ -0.79
APTX-231	ENST00000494973	TOR2A	Q5JU69	321 aa		10.14	□□□□□ -0.79
APTX-231	ENST00000494973	EBLN2	Q6P2I7	272 aa		10.14	□□□□□ -0.79
APTX-231	ENST00000494973	UQCC3	Q6UW78	93 aa		10.14	□□□□□ -0.79
APTX-231	ENST00000494973	PCNP	Q8WW12	178 aa	Known RBP	10.14	□□□□□ -0.79
APTX-231	ENST00000494973	LINC00052	Q96N35	136 aa		10.14	□□□□□ -0.79
APTX-231	ENST00000494973	ATG101	Q9BSB4	218 aa		10.14	□□□□□ -0.79
APTX-231	ENST00000494973	YTHDF2	Q9Y5A9	579 aa	Known RBP	10.14	□□□□□ -0.79
APTX-231	ENST00000494973	NOTCH3	Q9UM47	2321 aa		10.14	□□□□□ -0.79
APTX-231	ENST00000494973	LINC00862	A6NCI5	91 aa		10.13	□□□□□ -0.79
APTX-231	ENST00000494973	IZUMO1R	A6ND01	250 aa		10.13	□□□□□ -0.79
APTX-231	ENST00000494973	TMEM250	H0YL14	139 aa		10.13	□□□□□ -0.79
APTX-231	ENST00000494973	S100A9	P06702	114 aa	Known RBP	10.13	□□□□□ -0.79
APTX-231	ENST00000494973	SNRPC	P09234	159 aa	Known RBP	10.13	□□□□□ -0.79
APTX-231	ENST00000494973	EGFEM1P	Q0D2K5	195 aa		10.13	□□□□□ -0.79
APTX-231	ENST00000494973	FOXI2	Q6ZQN5	318 aa		10.13	□□□□□ -0.79
APTX-231	ENST00000494973	EXOC3-AS1	Q8N2X6	119 aa		10.13	□□□□□ -0.79
APTX-231	ENST00000494973	CYB561D1	Q8N8Q1	229 aa		10.13	□□□□□ -0.79
APTX-231	ENST00000494973	OR10J6P	Q8NGY7	276 aa		10.13	□□□□□ -0.79
APTX-231	ENST00000494973	MAP6D1	Q9H9H5	199 aa		10.13	□□□□□ -0.79
APTX-231	ENST00000494973	DUSP14	O95147	198 aa	Known RBP	10.12	□□□□□ -0.79
APTX-231	ENST00000494973	CD81	P60033	236 aa		10.12	□□□□□ -0.79
APTX-231	ENST00000494973	SAMD5	Q5TGI4	173 aa		10.12	□□□□□ -0.79
APTX-231	ENST00000494973	CCDC28A	Q8IWP9	274 aa		10.12	□□□□□ -0.79
APTX-231	ENST00000494973	C11orf52	Q96A22	123 aa		10.12	□□□□□ -0.79
APTX-231	ENST00000494973	EPDR1	Q9UM22	224 aa		10.12	□□□□□ -0.79
APTX-231	ENST00000494973	SELENOK	Q9Y6D0	94 aa		10.12	□□□□□ -0.79
APTX-231	ENST00000494973	SORL1	Q92673	2214 aa		10.12	□□□□□ -0.79
APTX-231	ENST00000494973	DIRC3	C9JPN6	131 aa		10.11	□□□□□ -0.79
APTX-231	ENST00000494973	PEX7	O00628	323 aa		10.11	□□□□□ -0.79
APTX-231	ENST00000494973	TCRA	P04437	139 aa		10.11	□□□□□ -0.79
APTX-231	ENST00000494973	AKR1C3	P42330	323 aa		10.11	□□□□□ -0.79
APTX-231	ENST00000494973	ATP5G3	P48201	142 aa		10.11	□□□□□ -0.79
APTX-231	ENST00000494973	CNN1	P51911	297 aa	Known RBP	10.11	□□□□□ -0.79
APTX-231	ENST00000494973	DEFB131A	P59861	70 aa		10.11	□□□□□ -0.79
APTX-231	ENST00000494973	RNF182	Q8N6D2	247 aa		10.11	□□□□□ -0.79
APTX-231	ENST00000494973	VWF	P04275	2813 aa		10.11	□□□□□ -0.79
APTX-231	ENST00000494973		M0R3E3	92 aa		10.1	□□□□□ -0.79
APTX-231	ENST00000494973	UBE2G1	P62253	170 aa		10.1	□□□□□ -0.79
APTX-231	ENST00000494973	ODF3L2	Q3SX64	289 aa		10.1	□□□□□ -0.79
APTX-231	ENST00000494973	OXLD1	Q5BKU9	147 aa		10.1	□□□□□ -0.79
APTX-231	ENST00000494973	COMMD7	Q86VX2	200 aa		10.1	□□□□□ -0.79
APTX-231	ENST00000494973	EIF4E3	Q8N5X7	224 aa	Known RBP	10.1	□□□□□ -0.79
APTX-231	ENST00000494973	TMEM75	Q8N9X5	138 aa		10.1	□□□□□ -0.79
APTX-231	ENST00000494973	OR8A1	Q8NGG7	326 aa		10.1	□□□□□ -0.79
APTX-231	ENST00000494973	FMC1	Q96HJ9	113 aa		10.1	□□□□□ -0.79
APTX-231	ENST00000494973	SAV1	Q9H4B6	383 aa	Predicted RBP	10.1	□□□□□ -0.79
APTX-231	ENST00000494973	TRBV7-9	A0A0J9YWB2	115 aa		10.09	□□□□□ -0.79
APTX-231	ENST00000494973	TMEM78	Q5T7P6	136 aa		10.09	□□□□□ -0.79
APTX-231	ENST00000494973	IGFL4	Q6B9Z1	124 aa		10.09	□□□□□ -0.79
APTX-231	ENST00000494973	GOLT1A	Q6ZVE7	132 aa		10.09	□□□□□ -0.79
APTX-231	ENST00000494973	FAM24B	Q8N5W8	94 aa		10.09	□□□□□ -0.79
APTX-231	ENST00000494973	C20orf173	Q96LM9	149 aa		10.09	□□□□□ -0.79
APTX-231	ENST00000494973	LINC00477	Q96M19	166 aa		10.09	□□□□□ -0.79
APTX-231	ENST00000494973	CLUHP3	Q96NS8	147 aa		10.09	□□□□□ -0.79
APTX-231	ENST00000494973	NDFIP1	Q9BT67	221 aa		10.09	□□□□□ -0.79
APTX-231	ENST00000494973	RPH3AL	Q9UNE2	315 aa		10.09	□□□□□ -0.79
APTX-231	ENST00000494973		A0A0J9YX75	114 aa		10.08	□□□□□ -0.8
APTX-231	ENST00000494973	TRBV6-1	A0A0K0K1D8	114 aa		10.08	□□□□□ -0.8
APTX-231	ENST00000494973	HLA-DRB4	P13762	266 aa		10.08	□□□□□ -0.8
APTX-231	ENST00000494973	HLA-DMB	P28068	263 aa		10.08	□□□□□ -0.8
APTX-231	ENST00000494973	HIST1H1A	Q02539	215 aa	Predicted RBP	10.08	□□□□□ -0.8
APTX-231	ENST00000494973	FAM74A3	Q4VXF1	159 aa		10.08	□□□□□ -0.8
APTX-231	ENST00000494973	C9orf47	Q6ZRZ4	202 aa		10.08	□□□□□ -0.8
APTX-231	ENST00000494973	STH	Q8IWL8	128 aa		10.08	□□□□□ -0.8
APTX-231	ENST00000494973	ODF3	Q96PU9	254 aa		10.08	□□□□□ -0.8
APTX-231	ENST00000494973	RARRES2	Q99969	163 aa		10.08	□□□□□ -0.8
APTX-231	ENST00000494973	SLC35B3	Q9H1N7	401 aa		10.08	□□□□□ -0.8
APTX-231	ENST00000494973	TREM1	Q9NP99	234 aa		10.08	□□□□□ -0.8
APTX-231	ENST00000494973	PPP1R14D	Q9NXH3	145 aa		10.08	□□□□□ -0.8
APTX-231	ENST00000494973	LENEP	Q9Y5L5	61 aa		10.08	□□□□□ -0.8
APTX-231	ENST00000494973	HLA-DRB4	X5D2U9	266 aa		10.08	□□□□□ -0.8
APTX-231	ENST00000494973	SCO2	A0A1W2PP80	73 aa		10.07	□□□□□ -0.8
APTX-231	ENST00000494973	NPIPB6	E9PJ23	425 aa		10.07	□□□□□ -0.8
APTX-231	ENST00000494973	CD7	P09564	240 aa		10.07	□□□□□ -0.8
APTX-231	ENST00000494973	TSPO	P30536	169 aa		10.07	□□□□□ -0.8
APTX-231	ENST00000494973	TAS2R60	P59551	318 aa		10.07	□□□□□ -0.8
APTX-231	ENST00000494973	NUTF2	P61970	127 aa	Known RBP	10.07	□□□□□ -0.8
APTX-231	ENST00000494973	GNG5	P63218	68 aa		10.07	□□□□□ -0.8
APTX-231	ENST00000494973	TMEM183B	Q1AE95	376 aa		10.07	□□□□□ -0.8
APTX-231	ENST00000494973	KPRP	Q5T749	579 aa	Predicted RBP	10.07	□□□□□ -0.8
APTX-231	ENST00000494973	SMIM12	Q96EX1	92 aa		10.07	□□□□□ -0.8
APTX-231	ENST00000494973	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.06	□□□□□ -0.8
APTX-231	ENST00000494973		G3V4G9	280 aa		10.06	□□□□□ -0.8
APTX-231	ENST00000494973	AMBP	P02760	352 aa		10.06	□□□□□ -0.8
APTX-231	ENST00000494973	SRP19	P09132	144 aa	Known RBP	10.06	□□□□□ -0.8
APTX-231	ENST00000494973	ZNF138	P52744	262 aa		10.06	□□□□□ -0.8
APTX-231	ENST00000494973	FLI1	Q01543	452 aa	Predicted RBP	10.06	□□□□□ -0.8
APTX-231	ENST00000494973	ACTL10	Q5JWF8	245 aa		10.06	□□□□□ -0.8
APTX-231	ENST00000494973	SAPCD1	Q5SSQ6	148 aa		10.06	□□□□□ -0.8
APTX-231	ENST00000494973	C2CD4C	Q8TF44	421 aa		10.06	□□□□□ -0.8
APTX-231	ENST00000494973	ZFP30	Q9Y2G7	519 aa		10.06	□□□□□ -0.8
APTX-231	ENST00000494973	KLF12	Q9Y4X4	402 aa		10.06	□□□□□ -0.8
APTX-231	ENST00000494973	TRRAP	Q9Y4A5	3859 aa		10.05	□□□□□ -0.8
APTX-231	ENST00000494973	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	10.05	□□□□□ -0.8
APTX-231	ENST00000494973		H3BMM0	161 aa		10.05	□□□□□ -0.8
APTX-231	ENST00000494973	IGKV2D-40	P01614	121 aa	Predicted RBP	10.05	□□□□□ -0.8
APTX-231	ENST00000494973	LEP	P41159	167 aa		10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms