RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ARRDC1Q8N5I2 433 aa6.09□□□□□ -1.43
APP-213ENST00000464867 THAP8Q8NA92 274 aa6.09□□□□□ -1.43
APP-213ENST00000464867 ATP6V0E2Q8NHE4 81 aa6.09□□□□□ -1.43
APP-213ENST00000464867 LINC01600Q96MT4 127 aa6.09□□□□□ -1.43
APP-213ENST00000464867 VGLL1Q99990 258 aa6.09□□□□□ -1.43
APP-213ENST00000464867 TMEM147Q9BVK8 224 aa6.09□□□□□ -1.43
APP-213ENST00000464867 CACFD1Q9UGQ2 172 aa6.09□□□□□ -1.43
APP-213ENST00000464867 RPH3ALQ9UNE2 315 aa6.09□□□□□ -1.43
APP-213ENST00000464867 PGAM2P15259 253 aa6.08□□□□□ -1.44
APP-213ENST00000464867 RPL7P18124 248 aaKnown RBP6.08□□□□□ -1.44
APP-213ENST00000464867 ORM2P19652 201 aa6.08□□□□□ -1.44
APP-213ENST00000464867 CXCL3P19876 107 aa6.08□□□□□ -1.44
APP-213ENST00000464867 GATA2P23769 480 aaPredicted RBP6.08□□□□□ -1.44
APP-213ENST00000464867 HRH1P35367 487 aa6.08□□□□□ -1.44
APP-213ENST00000464867 GPX4P36969 197 aaPredicted RBP6.08□□□□□ -1.44
APP-213ENST00000464867 LEPP41159 167 aa6.08□□□□□ -1.44
APP-213ENST00000464867 IL22RA2Q969J5 263 aa6.08□□□□□ -1.44
APP-213ENST00000464867 U3KQ87 197 aa6.08□□□□□ -1.44
APP-213ENST00000464867 IGKV1D-37A0A075B6S9 117 aa6.07□□□□□ -1.44
APP-213ENST00000464867 TRDV1A0A1B0GX56 115 aa6.07□□□□□ -1.44
APP-213ENST00000464867 GNAO1P09471 354 aa6.07□□□□□ -1.44
APP-213ENST00000464867 UCP3P55916 312 aa6.07□□□□□ -1.44
APP-213ENST00000464867 TIRAPP58753 221 aa6.07□□□□□ -1.44
APP-213ENST00000464867 ZNF846Q147U1 533 aa6.07□□□□□ -1.44
APP-213ENST00000464867 NMSQ5H8A3 153 aa6.07□□□□□ -1.44
APP-213ENST00000464867 C22orf42Q6IC83 251 aa6.07□□□□□ -1.44
APP-213ENST00000464867 NHLRC2Q8NBF2 726 aa6.07□□□□□ -1.44
APP-213ENST00000464867 C11orf72Q8NBR9 251 aa6.07□□□□□ -1.44
APP-213ENST00000464867 TMEM170AQ8WVE7 144 aa6.07□□□□□ -1.44
APP-213ENST00000464867 TRGV9Q99603 122 aa6.07□□□□□ -1.44
APP-213ENST00000464867 PARD6GQ9BYG4 376 aaPredicted RBP6.07□□□□□ -1.44
APP-213ENST00000464867 C8orf4Q9NR00 106 aa6.07□□□□□ -1.44
APP-213ENST00000464867 MRPL16Q9NX20 251 aaKnown RBP6.07□□□□□ -1.44
APP-213ENST00000464867 KLF12Q9Y4X4 402 aa6.07□□□□□ -1.44
APP-213ENST00000464867 MUC2Q02817 5179 aa6.06□□□□□ -1.44
APP-213ENST00000464867 C3orf85A0A1B0GTC6 90 aa6.06□□□□□ -1.44
APP-213ENST00000464867 TCL1AP56279 114 aa6.06□□□□□ -1.44
APP-213ENST00000464867 AARDQ4LEZ3 155 aa6.06□□□□□ -1.44
APP-213ENST00000464867 GPR107Q5VW38 600 aa6.06□□□□□ -1.44
APP-213ENST00000464867 IQCF2Q8IXL9 164 aa6.06□□□□□ -1.44
APP-213ENST00000464867 LGI3Q8N145 548 aa6.06□□□□□ -1.44
APP-213ENST00000464867 EIF4E3Q8N5X7 224 aaKnown RBP6.06□□□□□ -1.44
APP-213ENST00000464867 BPIFCQ8NFQ6 507 aa6.06□□□□□ -1.44
APP-213ENST00000464867 RMI2Q96E14 147 aa6.06□□□□□ -1.44
APP-213ENST00000464867 ZNF486Q96H40 463 aaPredicted RBP6.06□□□□□ -1.44
APP-213ENST00000464867 TP53RKQ96S44 253 aa6.06□□□□□ -1.44
APP-213ENST00000464867 S100A14Q9HCY8 104 aa6.06□□□□□ -1.44
APP-213ENST00000464867 SSR3Q9UNL2 185 aa6.06□□□□□ -1.44
APP-213ENST00000464867 TPRKBQ9Y3C4 175 aa6.06□□□□□ -1.44
APP-213ENST00000464867 TRAV8-1A0A0A6YYK1 113 aa6.05□□□□□ -1.44
APP-213ENST00000464867 RNF222A6NCQ9 220 aa6.05□□□□□ -1.44
APP-213ENST00000464867 HLA-DMAP28067 261 aa6.05□□□□□ -1.44
APP-213ENST00000464867 RCVRNP35243 200 aa6.05□□□□□ -1.44
APP-213ENST00000464867 ATP5IP56385 69 aaPredicted RBP6.05□□□□□ -1.44
APP-213ENST00000464867 PIGPP57054 158 aa6.05□□□□□ -1.44
APP-213ENST00000464867 RAB32Q13637 225 aa6.05□□□□□ -1.44
APP-213ENST00000464867 ANXA2RQ3ZCQ2 193 aa6.05□□□□□ -1.44
APP-213ENST00000464867 FAM122CQ6P4D5 195 aa6.05□□□□□ -1.44
APP-213ENST00000464867 S100A7AQ86SG5 101 aa6.05□□□□□ -1.44
APP-213ENST00000464867 PACRGLQ8N7B6 248 aa6.05□□□□□ -1.44
APP-213ENST00000464867 A0A0G2JRQ6 117 aa6.04□□□□□ -1.44
APP-213ENST00000464867 A0A0J9YXV3 536 aa6.04□□□□□ -1.44
APP-213ENST00000464867 RND3P61587 244 aa6.04□□□□□ -1.44
APP-213ENST00000464867 SP6Q3SY56 376 aa6.04□□□□□ -1.44
APP-213ENST00000464867 C14orf177Q52M58 125 aa6.04□□□□□ -1.44
APP-213ENST00000464867 IBA57Q5T440 356 aaKnown RBP6.04□□□□□ -1.44
APP-213ENST00000464867 ZNF431Q8TF32 576 aaPredicted RBP6.04□□□□□ -1.44
APP-213ENST00000464867 S100A16Q96FQ6 103 aaKnown RBP6.04□□□□□ -1.44
APP-213ENST00000464867 COPZ2Q9P299 210 aa6.04□□□□□ -1.44
APP-213ENST00000464867 RNF24Q9Y225 148 aa6.04□□□□□ -1.44
APP-213ENST00000464867 A0A087X0K7 114 aa6.03□□□□□ -1.44
APP-213ENST00000464867 C7orf71A4D174 169 aa6.03□□□□□ -1.44
APP-213ENST00000464867 GGTLC3B5MD39 225 aa6.03□□□□□ -1.44
APP-213ENST00000464867 B3GALNT1O75752 331 aa6.03□□□□□ -1.44
APP-213ENST00000464867 SLC25A5P05141 298 aaKnown RBP6.03□□□□□ -1.44
APP-213ENST00000464867 PFN1P07737 140 aaKnown RBP6.03□□□□□ -1.44
APP-213ENST00000464867 ANXA7P20073 488 aaKnown RBP6.03□□□□□ -1.44
APP-213ENST00000464867 BLOC1S1P78537 153 aa6.03□□□□□ -1.44
APP-213ENST00000464867 CCDC71LQ8N9Z2 235 aa6.03□□□□□ -1.44
APP-213ENST00000464867 OR5H6Q8NGV6 325 aa6.03□□□□□ -1.44
APP-213ENST00000464867 SLC25A38Q96DW6 304 aa6.03□□□□□ -1.44
APP-213ENST00000464867 ODF3Q96PU9 254 aa6.03□□□□□ -1.44
APP-213ENST00000464867 NDUFB11Q9NX14 153 aa6.03□□□□□ -1.44
APP-213ENST00000464867 ANAPC10Q9UM13 185 aa6.03□□□□□ -1.44
APP-213ENST00000464867 FABP12A6NFH5 140 aa6.02□□□□□ -1.45
APP-213ENST00000464867 MPDU1O75352 247 aa6.02□□□□□ -1.45
APP-213ENST00000464867 SFTA3P0C7M3 94 aa6.02□□□□□ -1.45
APP-213ENST00000464867 PRSS3P35030 304 aa6.02□□□□□ -1.45
APP-213ENST00000464867 MEF2DQ14814 521 aa6.02□□□□□ -1.45
APP-213ENST00000464867 OR1S1Q8NH92 325 aa6.02□□□□□ -1.45
APP-213ENST00000464867 DPH3Q96FX2 82 aa6.02□□□□□ -1.45
APP-213ENST00000464867 ZNF479Q96JC4 524 aa6.02□□□□□ -1.45
APP-213ENST00000464867 SLC50A1Q9BRV3 221 aa6.02□□□□□ -1.45
APP-213ENST00000464867 SHANK2-AS3Q9BTD1 123 aa6.02□□□□□ -1.45
APP-213ENST00000464867 SH3BGRL3Q9H299 93 aa6.02□□□□□ -1.45
APP-213ENST00000464867 CRCT1Q9UGL9 99 aa6.02□□□□□ -1.45
APP-213ENST00000464867 LPAP08519 4548 aa6.01□□□□□ -1.45
APP-213ENST00000464867 H3BRN7 92 aa6.01□□□□□ -1.45
APP-213ENST00000464867 PITX3O75364 302 aa6.01□□□□□ -1.45
APP-213ENST00000464867 CT45A10P0DMU9 189 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms