RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 LYSTQ99698 3801 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 HELTA6NFD8 242 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 PRAC2D3DTV9 90 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 AGPAT2O15120 278 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 DEDDO75618 318 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 IGKV3-20P01619 116 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 FABP1P07148 127 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 OR5G3P0C626 314 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 LINC00869P0C866 280 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 CXCL3P19876 107 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 PVALBP20472 110 aaPredicted RBP3.57□□□□□ -1.84
VPS41-205ENST00000414632 TAS2R30P59541 319 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 BAXQ07812 192 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 FGL1Q08830 312 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 IL15RAQ13261 267 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 ACTL10Q5JWF8 245 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 ZFAND6Q6FIF0 208 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 CD164L2Q6UWJ8 174 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 COX8CQ7Z4L0 72 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 TMEM144Q7Z5S9 345 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 STHQ8IWL8 128 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 SLC7A5P1Q8MH63 180 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 OR8I2Q8N0Y5 310 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 KMT2CQ8NEZ4 4911 aaKnown RBP3.57□□□□□ -1.84
VPS41-205ENST00000414632 OR10P1Q8NGE3 313 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 DCANP1Q8TF63 244 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 LINC00052Q96N35 136 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 UHRF2Q96PU4 802 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 MGST2Q99735 147 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 TMEM147Q9BVK8 224 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 NPVFQ9HCQ7 196 aa3.57□□□□□ -1.84
VPS41-205ENST00000414632 LYRM2Q9NU23 88 aaPredicted RBP3.57□□□□□ -1.84
VPS41-205ENST00000414632 ZNF98A6NK75 572 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 H3BRN7 92 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 H3BTX0 84 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 BOLA2-SMG1P6H3BVE0 249 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 PTTG1O95997 202 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 CA1P00915 261 aaPredicted RBP3.56□□□□□ -1.84
VPS41-205ENST00000414632 FGF7P21781 194 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 SULT1A1P50225 295 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 APOC4P55056 127 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 FXYD7P58549 80 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 EWSR1Q01844 656 aaKnown RBP eCLIP3.56□□□□□ -1.84
VPS41-205ENST00000414632 CLINT1Q14677 625 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 FCN2Q15485 313 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 GDF5OSQ5U4N7 250 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 MIC13Q5XKP0 118 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 PATE2Q6UY27 113 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 STX12Q86Y82 276 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 TMEM252Q8N6L7 170 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 OR5C1Q8NGR4 320 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 PPP1R1CQ8WVI7 109 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 OVOL2Q9BRP0 275 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 RSG1Q9BU20 258 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 C1QTNF4Q9BXJ3 329 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 SLC25A39Q9BZJ4 359 aaPredicted RBP3.56□□□□□ -1.84
VPS41-205ENST00000414632 SMIM3Q9BZL3 60 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 NMES1Q9C002 83 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 NRN1Q9NPD7 142 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 UQCC1Q9NVA1 299 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 CLEC5AQ9NY25 188 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 HIGD1AQ9Y241 93 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 SACSQ9NZJ4 4579 aa3.56□□□□□ -1.84
VPS41-205ENST00000414632 RYR3Q15413 4870 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 TRAV2A0A0B4J234 112 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 TRAV5A0A0B4J249 113 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 F6UB75 175 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 DEFB4AO15263 64 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 COX7A2P2O60397 106 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 HYPMO75409 117 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 EIF3GO75821 320 aaKnown RBP eCLIP3.55□□□□□ -1.84
VPS41-205ENST00000414632 MPC2O95563 127 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 TSHBP01222 138 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 RLN2P04090 185 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 CD5P06127 495 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 ZNF705DP0CH99 300 aaPredicted RBP3.55□□□□□ -1.84
VPS41-205ENST00000414632 ZNF705BP0CI00 300 aaPredicted RBP3.55□□□□□ -1.84
VPS41-205ENST00000414632 C4BPBP20851 252 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 HLA-DMBP28068 263 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 NUP62P37198 522 aaPredicted RBP3.55□□□□□ -1.84
VPS41-205ENST00000414632 GALR1P47211 349 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 AP2S1P53680 142 aaPredicted RBP3.55□□□□□ -1.84
VPS41-205ENST00000414632 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 LINC00305Q7Z4B0 112 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 TRPT1Q86TN4 253 aaKnown RBP3.55□□□□□ -1.84
VPS41-205ENST00000414632 ZNF546Q86UE3 836 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 RNF182Q8N6D2 247 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 OR11H7Q8NGC8 314 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 SHANK2-AS3Q9BTD1 123 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 RNF126Q9BV68 326 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 MED28Q9H204 178 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 ARV1Q9H2C2 271 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 EDA2RQ9HAV5 297 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 MBD2Q9UBB5 411 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 RFNGQ9Y644 331 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 PXMP4Q9Y6I8 212 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 ALMS1Q8TCU4 4167 aa3.55□□□□□ -1.84
VPS41-205ENST00000414632 TRAV8-2A0A0B4J237 113 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 A0A0J9YWU9 116 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 SNURFLB1AK76 121 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms