RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 IGHV3-35A0A0C4DH35 117 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 C9JCJ5 164 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 CRISP2P16562 243 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 SMUG1Q53HV7 270 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 CST9LP1Q5W188 147 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 CCDC28AQ8IWP9 274 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 NIPSNAP3BQ9BS92 247 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 ACANP16112 2415 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 RBFOX3A6NFN3 312 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 FAM74A7A6NL05 159 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 C11orf94C9JXX5 98 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 PNRC1Q12796 327 aaPredicted RBP3.86□□□□□ -1.79
LRIT3-201ENST00000327908 ICAM4Q14773 271 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 TMEM183BQ1AE95 376 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 COX8CQ7Z4L0 72 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 TRPT1Q86TN4 253 aaKnown RBP3.86□□□□□ -1.79
LRIT3-201ENST00000327908 GBGT1Q8N5D6 347 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 BLNKQ8WV28 456 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 IGF2BP2-AS1Q96M15 143 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 FAM210AQ96ND0 272 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 CSTL1Q9H114 145 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 TRAV21A0A0B4J279 112 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 DIRC3C9JPN6 131 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 PPP1R2P9O14990 202 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 TCRAP04437 139 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 ALKAL2Q6UX46 152 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 ADAMTSL5Q6ZMM2 481 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 C19orf73Q9NVV2 129 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 GNG13Q9P2W3 67 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 CENPEQ02224 2701 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 H3BMM0 161 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 H7BYZ3 331 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 ZNF688P0C7X2 276 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 MED14OSP0DP75 135 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 FLI1Q01543 452 aaPredicted RBP3.86□□□□□ -1.79
LRIT3-201ENST00000327908 PIK3CD-AS1Q5SR53 167 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 WFDC3Q8IUB2 231 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 EIF4E3Q8N5X7 224 aaKnown RBP3.86□□□□□ -1.79
LRIT3-201ENST00000327908 PYGO2Q9BRQ0 406 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 ZNF492Q9P255 531 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 KLF12Q9Y4X4 402 aa3.86□□□□□ -1.79
LRIT3-201ENST00000327908 CELSR3Q9NYQ7 3312 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 CDKN1BP46527 198 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 RANP62826 216 aaKnown RBP3.85□□□□□ -1.79
LRIT3-201ENST00000327908 Q6AWC8 147 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 DAZAP1Q96EP5 407 aaKnown RBP3.85□□□□□ -1.79
LRIT3-201ENST00000327908 B9D2Q9BPU9 175 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 LAMA5O15230 3695 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 MIFP14174 115 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 CCL20P78556 96 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 PTH2Q96A98 100 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 SPXQ9BT56 116 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 EIF5A2Q9GZV4 153 aaKnown RBP3.85□□□□□ -1.79
LRIT3-201ENST00000327908 TP53TG3Q9ULZ0 132 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 IGHV3-49A0A0A0MS15 119 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 LINC00862A6NCI5 91 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 PAGE4O60829 102 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 NDUFB4O95168 129 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 APOHP02749 345 aaPredicted RBP3.85□□□□□ -1.79
LRIT3-201ENST00000327908 PYYP10082 97 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 TFPI2P48307 235 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 SUMO1P63165 101 aaKnown RBP3.85□□□□□ -1.79
LRIT3-201ENST00000327908 ODF3L2Q3SX64 289 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 APRG1Q8IVJ8 170 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 C15orf54Q8N8G6 183 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 MRAPQ8TCY5 172 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 RCHY1Q96PM5 261 aa3.85□□□□□ -1.79
LRIT3-201ENST00000327908 TRAV8-2A0A0B4J237 113 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 TRAV5A0A0B4J249 113 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 C7orf71A4D174 169 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 B4DEV8 164 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 H3BQ15 152 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 S100A8P05109 93 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 ZNF726P1Q15940 193 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 SLC35B3Q9H1N7 401 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 AURKAIP1Q9NWT8 199 aaPredicted RBP3.84□□□□□ -1.79
LRIT3-201ENST00000327908 PSG8Q9UQ74 426 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 SONP18583 2426 aaKnown RBP3.84□□□□□ -1.79
LRIT3-201ENST00000327908 IGHV3-66A0A0C4DH42 116 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 GNG4P50150 75 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 ZNF415Q09FC8 603 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 GCSAMLQ5JQS6 135 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 TMEM183AQ8IXX5 376 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 BORCS7Q96B45 105 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 C16orf74Q96GX8 76 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 C11orf68Q9H3H3 251 aaKnown RBP3.84□□□□□ -1.79
LRIT3-201ENST00000327908 SDF2L1Q9HCN8 221 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 C2CD3Q4AC94 2353 aa3.84□□□□□ -1.79
LRIT3-201ENST00000327908 NKX2-5P52952 324 aaPredicted RBP3.84□□□□□ -1.8
LRIT3-201ENST00000327908 ANXA2RQ3ZCQ2 193 aa3.84□□□□□ -1.8
LRIT3-201ENST00000327908 COX19Q49B96 90 aa3.84□□□□□ -1.8
LRIT3-201ENST00000327908 CT83Q5H943 113 aa3.84□□□□□ -1.8
LRIT3-201ENST00000327908 IBA57Q5T440 356 aaKnown RBP3.84□□□□□ -1.8
LRIT3-201ENST00000327908 WDR73Q6P4I2 378 aa3.84□□□□□ -1.8
LRIT3-201ENST00000327908 Q86TA4 180 aa3.84□□□□□ -1.8
LRIT3-201ENST00000327908 SYT8Q8NBV8 401 aa3.84□□□□□ -1.8
LRIT3-201ENST00000327908 ZNF503Q96F45 646 aa3.84□□□□□ -1.8
LRIT3-201ENST00000327908 NAT8Q9UHE5 227 aa3.84□□□□□ -1.8
LRIT3-201ENST00000327908 IGHV3OR16-13A0A075B7E8 117 aa3.83□□□□□ -1.8
LRIT3-201ENST00000327908 IGHV3-74A0A0B4J1X5 117 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms