RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 PSG3Q16557 428 aa21.19■□□□□ 0.98
SMARCD3-201ENST00000262188 TMEM256Q8N2U0 113 aa21.19■□□□□ 0.98
SMARCD3-201ENST00000262188 WFDC12Q8WWY7 111 aa21.19■□□□□ 0.98
SMARCD3-201ENST00000262188 MANBALQ9NQG1 85 aa21.19■□□□□ 0.98
SMARCD3-201ENST00000262188 HYPMO75409 117 aa21.19■□□□□ 0.98
SMARCD3-201ENST00000262188 IGKV1-17P01599 117 aa21.19■□□□□ 0.98
SMARCD3-201ENST00000262188 TEPPQ6URK8 271 aa21.19■□□□□ 0.98
SMARCD3-201ENST00000262188 DUX3Q96PT4 197 aa21.19■□□□□ 0.98
SMARCD3-201ENST00000262188 TRBV7-1A0A0A6YYK4 115 aa21.18■□□□□ 0.98
SMARCD3-201ENST00000262188 CTSGP08311 255 aa21.18■□□□□ 0.98
SMARCD3-201ENST00000262188 RPL23P62829 140 aaKnown RBP21.18■□□□□ 0.98
SMARCD3-201ENST00000262188 SPATA45Q537H7 98 aa21.18■□□□□ 0.98
SMARCD3-201ENST00000262188 CST9LP1Q5W188 147 aa21.18■□□□□ 0.98
SMARCD3-201ENST00000262188 UBE2E2Q96LR5 201 aa21.18■□□□□ 0.98
SMARCD3-201ENST00000262188 FNDC10F2Z333 226 aa21.17■□□□□ 0.98
SMARCD3-201ENST00000262188 CDC34P49427 236 aaPredicted RBP21.17■□□□□ 0.98
SMARCD3-201ENST00000262188 YPEL3P61236 119 aaPredicted RBP21.17■□□□□ 0.98
SMARCD3-201ENST00000262188 THAP8Q8NA92 274 aa21.17■□□□□ 0.98
SMARCD3-201ENST00000262188 KLHL30-AS1Q8NEE0 82 aa21.17■□□□□ 0.98
SMARCD3-201ENST00000262188 SCGB1C1Q8TD33 95 aa21.17■□□□□ 0.98
SMARCD3-201ENST00000262188 NPCDR1Q9BY65 106 aa21.17■□□□□ 0.98
SMARCD3-201ENST00000262188 IGHV3OR16-8A0A075B7F1 116 aa21.16■□□□□ 0.98
SMARCD3-201ENST00000262188 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP21.16■□□□□ 0.98
SMARCD3-201ENST00000262188 VAMP3Q15836 100 aa21.16■□□□□ 0.98
SMARCD3-201ENST00000262188 ZNF709Q8N972 641 aa21.16■□□□□ 0.98
SMARCD3-201ENST00000262188 ZNF414Q96IQ9 312 aa21.16■□□□□ 0.98
SMARCD3-201ENST00000262188 SMPXQ9UHP9 88 aa21.16■□□□□ 0.98
SMARCD3-201ENST00000262188 A0A1B0GUS0 222 aa21.16■□□□□ 0.98
SMARCD3-201ENST00000262188 C8orf86Q6ZUL3 223 aa21.16■□□□□ 0.98
SMARCD3-201ENST00000262188 GGTLC1Q9BX51 225 aa21.16■□□□□ 0.98
SMARCD3-201ENST00000262188 ZNF586Q9NXT0 402 aa21.16■□□□□ 0.98
SMARCD3-201ENST00000262188 ARL3P36405 182 aa21.15■□□□□ 0.98
SMARCD3-201ENST00000262188 MIC13Q5XKP0 118 aa21.15■□□□□ 0.98
SMARCD3-201ENST00000262188 BMPR1BO00238 502 aa21.14■□□□□ 0.98
SMARCD3-201ENST00000262188 LGALS1P09382 135 aaKnown RBP21.14■□□□□ 0.98
SMARCD3-201ENST00000262188 TRAV9-1A0A075B6T8 112 aa21.14■□□□□ 0.97
SMARCD3-201ENST00000262188 FCGR2BP31994 310 aaPredicted RBP21.14■□□□□ 0.97
SMARCD3-201ENST00000262188 NIT1Q86X76 327 aa21.14■□□□□ 0.97
SMARCD3-201ENST00000262188 PEF1Q9UBV8 284 aaKnown RBP21.14■□□□□ 0.97
SMARCD3-201ENST00000262188 IGHV4OR15-8A0A075B7B6 117 aa21.13■□□□□ 0.97
SMARCD3-201ENST00000262188 A0A087WW49 117 aa21.13■□□□□ 0.97
SMARCD3-201ENST00000262188 NSUN5P1Q3KNT7 163 aa21.13■□□□□ 0.97
SMARCD3-201ENST00000262188 CLUHP3Q96NS8 147 aa21.13■□□□□ 0.97
SMARCD3-201ENST00000262188 ZNF320A2RRD8 509 aa21.12■□□□□ 0.97
SMARCD3-201ENST00000262188 ADARB2-AS1A8MUL3 147 aa21.12■□□□□ 0.97
SMARCD3-201ENST00000262188 TSPOP30536 169 aa21.12■□□□□ 0.97
SMARCD3-201ENST00000262188 Q0VG73 95 aa21.12■□□□□ 0.97
SMARCD3-201ENST00000262188 PSMG3Q9BT73 122 aaPredicted RBP21.12■□□□□ 0.97
SMARCD3-201ENST00000262188 TSSC4Q9Y5U2 329 aaPredicted RBP21.12■□□□□ 0.97
SMARCD3-201ENST00000262188 PSG1P11464 419 aa21.12■□□□□ 0.97
SMARCD3-201ENST00000262188 TRGV9Q99603 122 aa21.12■□□□□ 0.97
SMARCD3-201ENST00000262188 NUPR1O60356 82 aa21.11■□□□□ 0.97
SMARCD3-201ENST00000262188 C4orf3Q8WVX3 66 aa21.11■□□□□ 0.97
SMARCD3-201ENST00000262188 DIRC3C9JPN6 131 aa21.1■□□□□ 0.97
SMARCD3-201ENST00000262188 S100A7P31151 101 aa21.1■□□□□ 0.97
SMARCD3-201ENST00000262188 GCSAMLQ5JQS6 135 aa21.1■□□□□ 0.97
SMARCD3-201ENST00000262188 STPG3Q8N7X2 389 aa21.1■□□□□ 0.97
SMARCD3-201ENST00000262188 A0A1B0GV72 72 aa21.09■□□□□ 0.97
SMARCD3-201ENST00000262188 LINC00869P0C866 280 aa21.09■□□□□ 0.97
SMARCD3-201ENST00000262188 Q8N976 141 aa21.09■□□□□ 0.97
SMARCD3-201ENST00000262188 OR11H1Q8NG94 326 aa21.08■□□□□ 0.97
SMARCD3-201ENST00000262188 VSIRQ9H7M9 311 aa21.08■□□□□ 0.97
SMARCD3-201ENST00000262188 MPDU1O75352 247 aa21.08■□□□□ 0.96
SMARCD3-201ENST00000262188 SERF2P84101 59 aa21.08■□□□□ 0.96
SMARCD3-201ENST00000262188 MEF2BQ02080 365 aaPredicted RBP21.08■□□□□ 0.96
SMARCD3-201ENST00000262188 RAB31Q13636 194 aa21.08■□□□□ 0.96
SMARCD3-201ENST00000262188 TMEM158Q8WZ71 300 aa21.08■□□□□ 0.96
SMARCD3-201ENST00000262188 UNQ9165/PRO28630Q6UXU0 137 aa21.07■□□□□ 0.96
SMARCD3-201ENST00000262188 RAX2Q96IS3 184 aa21.07■□□□□ 0.96
SMARCD3-201ENST00000262188 COL6A5A8TX70 2615 aa21.07■□□□□ 0.96
SMARCD3-201ENST00000262188 SLURP1P55000 103 aa21.06■□□□□ 0.96
SMARCD3-201ENST00000262188 PRR20EP86478 221 aa21.06■□□□□ 0.96
SMARCD3-201ENST00000262188 PRR20CP86479 221 aa21.06■□□□□ 0.96
SMARCD3-201ENST00000262188 PRR20DP86480 221 aa21.06■□□□□ 0.96
SMARCD3-201ENST00000262188 PRR20BP86481 221 aa21.06■□□□□ 0.96
SMARCD3-201ENST00000262188 PRR20AP86496 221 aa21.06■□□□□ 0.96
SMARCD3-201ENST00000262188 RNF24Q9Y225 148 aa21.06■□□□□ 0.96
SMARCD3-201ENST00000262188 PMCHL1Q16048 86 aa21.06■□□□□ 0.96
SMARCD3-201ENST00000262188 ZNF207O43670 478 aaKnown RBP21.05■□□□□ 0.96
SMARCD3-201ENST00000262188 LYZP61626 148 aa21.05■□□□□ 0.96
SMARCD3-201ENST00000262188 FFAR4Q5NUL3 377 aa21.05■□□□□ 0.96
SMARCD3-201ENST00000262188 CITED1Q99966 193 aa21.05■□□□□ 0.96
SMARCD3-201ENST00000262188 SAMD10Q9BYL1 202 aa21.05■□□□□ 0.96
SMARCD3-201ENST00000262188 SLC39A9Q9NUM3 307 aa21.05■□□□□ 0.96
SMARCD3-201ENST00000262188 ZNF253O75346 499 aa21.05■□□□□ 0.96
SMARCD3-201ENST00000262188 IL4P05112 153 aa21.05■□□□□ 0.96
SMARCD3-201ENST00000262188 HINT1P49773 126 aaPredicted RBP21.05■□□□□ 0.96
SMARCD3-201ENST00000262188 OR1N2Q8NGR9 330 aa21.05■□□□□ 0.96
SMARCD3-201ENST00000262188 C17orf112F2Z3M2 114 aa21.04■□□□□ 0.96
SMARCD3-201ENST00000262188 CRISP2P16562 243 aa21.04■□□□□ 0.96
SMARCD3-201ENST00000262188 ORM2P19652 201 aa21.04■□□□□ 0.96
SMARCD3-201ENST00000262188 HOXD3P31249 432 aaPredicted RBP21.04■□□□□ 0.96
SMARCD3-201ENST00000262188 PARLQ9H300 379 aa21.04■□□□□ 0.96
SMARCD3-201ENST00000262188 RPEL1Q2QD12 228 aa21.03■□□□□ 0.96
SMARCD3-201ENST00000262188 ATP6V0BQ99437 205 aa21.03■□□□□ 0.96
SMARCD3-201ENST00000262188 TP53TG3Q9ULZ0 132 aa21.03■□□□□ 0.96
SMARCD3-201ENST00000262188 STAB1Q9NY15 2570 aa21.03■□□□□ 0.96
SMARCD3-201ENST00000262188 EDN2P20800 178 aa21.03■□□□□ 0.96
SMARCD3-201ENST00000262188 OR1B1Q8NGR6 318 aa21.03■□□□□ 0.96
SMARCD3-201ENST00000262188 ZFAND3Q9H8U3 227 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms