RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 IGHV7-4-1A0A0J9YVY3 117 aa11.73□□□□□ -0.53
CLN6-219ENST00000637329 ZNF727A8MUV8 499 aa11.73□□□□□ -0.53
CLN6-219ENST00000637329 LINC01619G3V211 115 aa11.73□□□□□ -0.53
CLN6-219ENST00000637329 HOXD3P31249 432 aaPredicted RBP11.73□□□□□ -0.53
CLN6-219ENST00000637329 PROK1P58294 105 aa11.73□□□□□ -0.53
CLN6-219ENST00000637329 SUMO1P63165 101 aaKnown RBP11.73□□□□□ -0.53
CLN6-219ENST00000637329 PSG9Q00887 426 aa11.73□□□□□ -0.53
CLN6-219ENST00000637329 KHDC1LQ5JSQ8 128 aa11.73□□□□□ -0.53
CLN6-219ENST00000637329 SIGLEC15Q6ZMC9 328 aa11.73□□□□□ -0.53
CLN6-219ENST00000637329 ARL6IP6Q8N6S5 226 aa11.73□□□□□ -0.53
CLN6-219ENST00000637329 GLMPQ8WWB7 406 aa11.73□□□□□ -0.53
CLN6-219ENST00000637329 NAT8Q9UHE5 227 aa11.73□□□□□ -0.53
CLN6-219ENST00000637329 TSSC4Q9Y5U2 329 aaPredicted RBP11.73□□□□□ -0.53
CLN6-219ENST00000637329 ZNF320A2RRD8 509 aa11.72□□□□□ -0.53
CLN6-219ENST00000637329 NDUFB4O95168 129 aa11.72□□□□□ -0.53
CLN6-219ENST00000637329 RANP62826 216 aaKnown RBP11.72□□□□□ -0.53
CLN6-219ENST00000637329 KLHL30-AS1Q8NEE0 82 aa11.72□□□□□ -0.53
CLN6-219ENST00000637329 C2CD4CQ8TF44 421 aa11.72□□□□□ -0.53
CLN6-219ENST00000637329 TVP23CQ96ET8 276 aa11.72□□□□□ -0.53
CLN6-219ENST00000637329 SLC50A1Q9BRV3 221 aa11.72□□□□□ -0.53
CLN6-219ENST00000637329 AAMDCQ9H7C9 122 aa11.72□□□□□ -0.53
CLN6-219ENST00000637329 C9JCJ5 164 aa11.71□□□□□ -0.53
CLN6-219ENST00000637329 PEX7O00628 323 aa11.71□□□□□ -0.53
CLN6-219ENST00000637329 ZNF207O43670 478 aaKnown RBP11.71□□□□□ -0.53
CLN6-219ENST00000637329 SLC25A5P05141 298 aaKnown RBP11.71□□□□□ -0.53
CLN6-219ENST00000637329 RHEBQ15382 184 aa11.71□□□□□ -0.53
CLN6-219ENST00000637329 CLRN3Q8NCR9 226 aa11.71□□□□□ -0.53
CLN6-219ENST00000637329 ATG101Q9BSB4 218 aa11.71□□□□□ -0.53
CLN6-219ENST00000637329 SMAD5-AS1Q9Y6J3 95 aa11.71□□□□□ -0.53
CLN6-219ENST00000637329 SERTM2A0A1B0GWG4 89 aa11.7□□□□□ -0.54
CLN6-219ENST00000637329 TMEM213A2RRL7 107 aa11.7□□□□□ -0.54
CLN6-219ENST00000637329 PGPA6NDG6 321 aa11.7□□□□□ -0.54
CLN6-219ENST00000637329 HELTA6NFD8 242 aa11.7□□□□□ -0.54
CLN6-219ENST00000637329 SLC17A3O00476 420 aa11.7□□□□□ -0.54
CLN6-219ENST00000637329 APOHP02749 345 aaPredicted RBP11.7□□□□□ -0.54
CLN6-219ENST00000637329 S100A9P06702 114 aaKnown RBP11.7□□□□□ -0.54
CLN6-219ENST00000637329 CD28P10747 220 aa11.7□□□□□ -0.54
CLN6-219ENST00000637329 AKR1C3P42330 323 aa11.7□□□□□ -0.54
CLN6-219ENST00000637329 CNN1P51911 297 aaKnown RBP11.7□□□□□ -0.54
CLN6-219ENST00000637329 KLF5Q13887 457 aaPredicted RBP11.7□□□□□ -0.54
CLN6-219ENST00000637329 ZNF674Q2M3X9 581 aa11.7□□□□□ -0.54
CLN6-219ENST00000637329 AWAT1Q58HT5 328 aa11.7□□□□□ -0.54
CLN6-219ENST00000637329 SAMD13Q5VXD3 122 aa11.7□□□□□ -0.54
CLN6-219ENST00000637329 CMTM2Q8TAZ6 248 aa11.7□□□□□ -0.54
CLN6-219ENST00000637329 SDF2L1Q9HCN8 221 aa11.7□□□□□ -0.54
CLN6-219ENST00000637329 CLEC5AQ9NY25 188 aa11.7□□□□□ -0.54
CLN6-219ENST00000637329 SMPXQ9UHP9 88 aa11.7□□□□□ -0.54
CLN6-219ENST00000637329 EPDR1Q9UM22 224 aa11.7□□□□□ -0.54
CLN6-219ENST00000637329 LY96Q9Y6Y9 160 aa11.7□□□□□ -0.54
CLN6-219ENST00000637329 B4DEV8 164 aa11.69□□□□□ -0.54
CLN6-219ENST00000637329 H3BTX0 84 aa11.69□□□□□ -0.54
CLN6-219ENST00000637329 RPL35P42766 123 aaKnown RBP11.69□□□□□ -0.54
CLN6-219ENST00000637329 TAS2R60P59551 318 aa11.69□□□□□ -0.54
CLN6-219ENST00000637329 FHL3Q13643 280 aa11.69□□□□□ -0.54
CLN6-219ENST00000637329 TMEM241Q24JQ0 296 aa11.69□□□□□ -0.54
CLN6-219ENST00000637329 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.69□□□□□ -0.54
CLN6-219ENST00000637329 OR1N2Q8NGR9 330 aa11.69□□□□□ -0.54
CLN6-219ENST00000637329 DPF1Q92782 380 aa11.69□□□□□ -0.54
CLN6-219ENST00000637329 DERL1Q9BUN8 251 aa11.69□□□□□ -0.54
CLN6-219ENST00000637329 ZNF331Q9NQX6 463 aaPredicted RBP11.69□□□□□ -0.54
CLN6-219ENST00000637329 PRELID1Q9Y255 219 aa11.69□□□□□ -0.54
CLN6-219ENST00000637329 ZNF785A8K8V0 405 aa11.68□□□□□ -0.54
CLN6-219ENST00000637329 M0R036 132 aa11.68□□□□□ -0.54
CLN6-219ENST00000637329 CHEK1O14757 476 aa11.68□□□□□ -0.54
CLN6-219ENST00000637329 TCRAP04437 139 aa11.68□□□□□ -0.54
CLN6-219ENST00000637329 SYNJ2BPP57105 145 aa11.68□□□□□ -0.54
CLN6-219ENST00000637329 TM4SF20Q53R12 229 aa11.68□□□□□ -0.54
CLN6-219ENST00000637329 C18orf65Q6ZTR6 163 aa11.68□□□□□ -0.54
CLN6-219ENST00000637329 OR11H1Q8NG94 326 aa11.68□□□□□ -0.54
CLN6-219ENST00000637329 MRPL53Q96EL3 112 aaKnown RBP11.68□□□□□ -0.54
CLN6-219ENST00000637329 SMIM12Q96EX1 92 aa11.68□□□□□ -0.54
CLN6-219ENST00000637329 FMC1Q96HJ9 113 aa11.68□□□□□ -0.54
CLN6-219ENST00000637329 C17orf77Q96MU5 243 aa11.68□□□□□ -0.54
CLN6-219ENST00000637329 RHPN1-AS1Q9BWJ2 59 aa11.68□□□□□ -0.54
CLN6-219ENST00000637329 PEMTQ9UBM1 199 aa11.68□□□□□ -0.54
CLN6-219ENST00000637329 KLF12Q9Y4X4 402 aa11.68□□□□□ -0.54
CLN6-219ENST00000637329 IGHV3OR16-13A0A075B7E8 117 aa11.67□□□□□ -0.54
CLN6-219ENST00000637329 IGHV3-49A0A0A0MS15 119 aa11.67□□□□□ -0.54
CLN6-219ENST00000637329 IGHV3-74A0A0B4J1X5 117 aa11.67□□□□□ -0.54
CLN6-219ENST00000637329 IGHV3-66A0A0C4DH42 116 aa11.67□□□□□ -0.54
CLN6-219ENST00000637329 K7EQM0 130 aa11.67□□□□□ -0.54
CLN6-219ENST00000637329 M0QZ24 198 aa11.67□□□□□ -0.54
CLN6-219ENST00000637329 SNRPCP09234 159 aaKnown RBP11.67□□□□□ -0.54
CLN6-219ENST00000637329 CSN1S1P47710 185 aa11.67□□□□□ -0.54
CLN6-219ENST00000637329 DEFB136Q30KP8 78 aa11.67□□□□□ -0.54
CLN6-219ENST00000637329 C8orf86Q6ZUL3 223 aa11.67□□□□□ -0.54
CLN6-219ENST00000637329 CITED2Q99967 270 aaPredicted RBP11.67□□□□□ -0.54
CLN6-219ENST00000637329 ANK2Q01484 3957 aa11.66□□□□□ -0.54
CLN6-219ENST00000637329 TRBV20OR9-2A0A075B6H5 130 aa11.66□□□□□ -0.54
CLN6-219ENST00000637329 A0A087WWC5 75 aa11.66□□□□□ -0.54
CLN6-219ENST00000637329 TRBV6-1A0A0K0K1D8 114 aa11.66□□□□□ -0.54
CLN6-219ENST00000637329 FBLL1A6NHQ2 334 aaKnown RBP11.66□□□□□ -0.54
CLN6-219ENST00000637329 GNG4P50150 75 aa11.66□□□□□ -0.54
CLN6-219ENST00000637329 UBE2G1P62253 170 aa11.66□□□□□ -0.54
CLN6-219ENST00000637329 TMEM183BQ1AE95 376 aa11.66□□□□□ -0.54
CLN6-219ENST00000637329 EXOC3-AS1Q8N2X6 119 aa11.66□□□□□ -0.54
CLN6-219ENST00000637329 TMEM75Q8N9X5 138 aa11.66□□□□□ -0.54
CLN6-219ENST00000637329 IGF2BP2-AS1Q96M15 143 aa11.66□□□□□ -0.54
CLN6-219ENST00000637329 NRN1Q9NPD7 142 aa11.66□□□□□ -0.54
CLN6-219ENST00000637329 C2orf70A6NJV1 201 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms