RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 NIPSNAP3BQ9BS92 247 aa13.59□□□□□ -0.23
CLN6-213ENST00000636212 CXCL2P19875 107 aa13.58□□□□□ -0.24
CLN6-213ENST00000636212 CAMLGP49069 296 aa13.58□□□□□ -0.24
CLN6-213ENST00000636212 HIST1H1AQ02539 215 aaPredicted RBP13.58□□□□□ -0.24
CLN6-213ENST00000636212 PSG3Q16557 428 aa13.58□□□□□ -0.24
CLN6-213ENST00000636212 SPINK13Q1W4C9 94 aa13.58□□□□□ -0.24
CLN6-213ENST00000636212 FAM222AQ5U5X8 452 aa13.58□□□□□ -0.24
CLN6-213ENST00000636212 C10orf113Q5VZT2 155 aa13.58□□□□□ -0.24
CLN6-213ENST00000636212 LCN15Q6UWW0 184 aa13.58□□□□□ -0.24
CLN6-213ENST00000636212 AMTNQ6UX39 209 aa13.58□□□□□ -0.24
CLN6-213ENST00000636212 PATE2Q6UY27 113 aa13.58□□□□□ -0.24
CLN6-213ENST00000636212 BPIFA4PQ86YQ2 179 aa13.58□□□□□ -0.24
CLN6-213ENST00000636212 OR11H7Q8NGC8 314 aa13.58□□□□□ -0.24
CLN6-213ENST00000636212 DKK2Q9UBU2 259 aa13.58□□□□□ -0.24
CLN6-213ENST00000636212 CST7O76096 145 aa13.57□□□□□ -0.24
CLN6-213ENST00000636212 P0DMU3 169 aa13.57□□□□□ -0.24
CLN6-213ENST00000636212 FAM231AP0DMU4 169 aa13.57□□□□□ -0.24
CLN6-213ENST00000636212 FAM231CP0DMU5 169 aa13.57□□□□□ -0.24
CLN6-213ENST00000636212 CXCL3P19876 107 aa13.57□□□□□ -0.24
CLN6-213ENST00000636212 HBG1P69891 147 aa13.57□□□□□ -0.24
CLN6-213ENST00000636212 HBG2P69892 147 aa13.57□□□□□ -0.24
CLN6-213ENST00000636212 STX12Q86Y82 276 aa13.57□□□□□ -0.24
CLN6-213ENST00000636212 SLC50A1Q9BRV3 221 aa13.57□□□□□ -0.24
CLN6-213ENST00000636212 GPN1Q9HCN4 374 aaPredicted RBP13.57□□□□□ -0.24
CLN6-213ENST00000636212 UQCC1Q9NVA1 299 aa13.57□□□□□ -0.24
CLN6-213ENST00000636212 YTHDF2Q9Y5A9 579 aaKnown RBP13.57□□□□□ -0.24
CLN6-213ENST00000636212 EPPK1P58107 5090 aaKnown RBP13.56□□□□□ -0.24
CLN6-213ENST00000636212 FAM24AA6NFZ4 105 aa13.56□□□□□ -0.24
CLN6-213ENST00000636212 BOLA2-SMG1P6H3BVE0 249 aa13.56□□□□□ -0.24
CLN6-213ENST00000636212 M0R2Z0 102 aa13.56□□□□□ -0.24
CLN6-213ENST00000636212 S100A11P31949 105 aa13.56□□□□□ -0.24
CLN6-213ENST00000636212 PRR20EP86478 221 aa13.56□□□□□ -0.24
CLN6-213ENST00000636212 PRR20CP86479 221 aa13.56□□□□□ -0.24
CLN6-213ENST00000636212 PRR20DP86480 221 aa13.56□□□□□ -0.24
CLN6-213ENST00000636212 PRR20BP86481 221 aa13.56□□□□□ -0.24
CLN6-213ENST00000636212 PRR20AP86496 221 aa13.56□□□□□ -0.24
CLN6-213ENST00000636212 NRARPQ7Z6K4 114 aa13.56□□□□□ -0.24
CLN6-213ENST00000636212 OR8A1Q8NGG7 326 aa13.56□□□□□ -0.24
CLN6-213ENST00000636212 OR1L4Q8NGR5 311 aa13.56□□□□□ -0.24
CLN6-213ENST00000636212 FAM210BQ96KR6 192 aa13.56□□□□□ -0.24
CLN6-213ENST00000636212 MGST2Q99735 147 aa13.56□□□□□ -0.24
CLN6-213ENST00000636212 SULT1A1P50225 295 aa13.55□□□□□ -0.24
CLN6-213ENST00000636212 DAD1P61803 113 aa13.55□□□□□ -0.24
CLN6-213ENST00000636212 OXA1LQ15070 435 aa13.55□□□□□ -0.24
CLN6-213ENST00000636212 RPUSD4Q96CM3 377 aaKnown RBP13.55□□□□□ -0.24
CLN6-213ENST00000636212 PFDN5Q99471 154 aa13.55□□□□□ -0.24
CLN6-213ENST00000636212 DNAJC4Q9NNZ3 241 aa13.55□□□□□ -0.24
CLN6-213ENST00000636212 LYRM2Q9NU23 88 aaPredicted RBP13.55□□□□□ -0.24
CLN6-213ENST00000636212 PRAF2O60831 178 aa13.54□□□□□ -0.24
CLN6-213ENST00000636212 BAXQ07812 192 aa13.54□□□□□ -0.24
CLN6-213ENST00000636212 RLN2P04090 185 aa13.53□□□□□ -0.24
CLN6-213ENST00000636212 HTN3P15516 51 aa13.53□□□□□ -0.24
CLN6-213ENST00000636212 RAB32Q13637 225 aa13.53□□□□□ -0.24
CLN6-213ENST00000636212 ATP6V1FQ16864 119 aa13.53□□□□□ -0.24
CLN6-213ENST00000636212 BAP18Q8IXM2 172 aa13.53□□□□□ -0.24
CLN6-213ENST00000636212 TMEM256Q8N2U0 113 aa13.53□□□□□ -0.24
CLN6-213ENST00000636212 ZNF331Q9NQX6 463 aaPredicted RBP13.53□□□□□ -0.24
CLN6-213ENST00000636212 WDR83OSQ9Y284 106 aa13.53□□□□□ -0.24
CLN6-213ENST00000636212 PXMP4Q9Y6I8 212 aa13.53□□□□□ -0.24
CLN6-213ENST00000636212 UBE2L5PA0A1B0GUS4 154 aa13.52□□□□□ -0.25
CLN6-213ENST00000636212 MRPS12O15235 138 aaKnown RBP13.52□□□□□ -0.25
CLN6-213ENST00000636212 MIC13Q5XKP0 118 aa13.52□□□□□ -0.25
CLN6-213ENST00000636212 TMEM252Q8N6L7 170 aa13.52□□□□□ -0.25
CLN6-213ENST00000636212 OR10J6PQ8NGY7 276 aa13.52□□□□□ -0.25
CLN6-213ENST00000636212 TMEM37Q8WXS4 190 aa13.52□□□□□ -0.25
CLN6-213ENST00000636212 LINC01587Q99440 93 aa13.52□□□□□ -0.25
CLN6-213ENST00000636212 C11orf1Q9H5F2 150 aa13.52□□□□□ -0.25
CLN6-213ENST00000636212 TRAV12-2A0A075B6T6 113 aa13.51□□□□□ -0.25
CLN6-213ENST00000636212 LYRM9A8MSI8 78 aa13.51□□□□□ -0.25
CLN6-213ENST00000636212 ZNF705GA8MUZ8 300 aaPredicted RBP13.51□□□□□ -0.25
CLN6-213ENST00000636212 INMT-MINDY4F8WBC2 141 aa13.51□□□□□ -0.25
CLN6-213ENST00000636212 CRXO43186 299 aaPredicted RBP13.51□□□□□ -0.25
CLN6-213ENST00000636212 PTTG1O95997 202 aa13.51□□□□□ -0.25
CLN6-213ENST00000636212 CDKN1BP46527 198 aa13.51□□□□□ -0.25
CLN6-213ENST00000636212 RPL29P47914 159 aaKnown RBP13.51□□□□□ -0.25
CLN6-213ENST00000636212 OPCMLQ14982 345 aa13.51□□□□□ -0.25
CLN6-213ENST00000636212 GUK1Q16774 197 aa13.51□□□□□ -0.25
CLN6-213ENST00000636212 VWC2Q2TAL6 325 aa13.51□□□□□ -0.25
CLN6-213ENST00000636212 UBE2DNLQ8IWF7 75 aa13.51□□□□□ -0.25
CLN6-213ENST00000636212 POM121L12Q8N7R1 296 aa13.51□□□□□ -0.25
CLN6-213ENST00000636212 MARVELD1Q9BSK0 173 aa13.51□□□□□ -0.25
CLN6-213ENST00000636212 BIRC6Q9NR09 4857 aa13.51□□□□□ -0.25
CLN6-213ENST00000636212 SNRPCP09234 159 aaKnown RBP13.5□□□□□ -0.25
CLN6-213ENST00000636212 FGF7P21781 194 aa13.5□□□□□ -0.25
CLN6-213ENST00000636212 TSPOP30536 169 aa13.5□□□□□ -0.25
CLN6-213ENST00000636212 IGSF23A1L1A6 192 aa13.49□□□□□ -0.25
CLN6-213ENST00000636212 MPDU1O75352 247 aa13.49□□□□□ -0.25
CLN6-213ENST00000636212 IL15RAQ13261 267 aa13.49□□□□□ -0.25
CLN6-213ENST00000636212 SLC25A31Q9H0C2 315 aa13.49□□□□□ -0.25
CLN6-213ENST00000636212 SLC39A9Q9NUM3 307 aa13.49□□□□□ -0.25
CLN6-213ENST00000636212 PLA2G2EQ9NZK7 142 aa13.49□□□□□ -0.25
CLN6-213ENST00000636212 H3BTX0 84 aa13.48□□□□□ -0.25
CLN6-213ENST00000636212 IGLC2P0DOY2 106 aa13.48□□□□□ -0.25
CLN6-213ENST00000636212 HTN1P15515 57 aa13.48□□□□□ -0.25
CLN6-213ENST00000636212 TAS2R60P59551 318 aa13.48□□□□□ -0.25
CLN6-213ENST00000636212 CYCSP99999 105 aaKnown RBP13.48□□□□□ -0.25
CLN6-213ENST00000636212 E5RGE8 158 aa13.47□□□□□ -0.25
CLN6-213ENST00000636212 MORN5Q5VZ52 161 aa13.47□□□□□ -0.25
CLN6-213ENST00000636212 CHAC2Q8WUX2 184 aa13.47□□□□□ -0.25
CLN6-213ENST00000636212 C16orf74Q96GX8 76 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms