RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 PSG9Q00887 426 aa10.47□□□□□ -0.73
HDDC2-204ENST00000608295 SPINK13Q1W4C9 94 aa10.47□□□□□ -0.73
HDDC2-204ENST00000608295 GCSAMLQ5JQS6 135 aa10.47□□□□□ -0.73
HDDC2-204ENST00000608295 SAMD13Q5VXD3 122 aa10.47□□□□□ -0.73
HDDC2-204ENST00000608295 Q6ZRG5 221 aa10.47□□□□□ -0.73
HDDC2-204ENST00000608295 PPP1R1CQ8WVI7 109 aa10.47□□□□□ -0.73
HDDC2-204ENST00000608295 SLC39A9Q9NUM3 307 aa10.47□□□□□ -0.73
HDDC2-204ENST00000608295 ALG5Q9Y673 324 aa10.47□□□□□ -0.73
HDDC2-204ENST00000608295 PXMP4Q9Y6I8 212 aa10.47□□□□□ -0.73
HDDC2-204ENST00000608295 HYDINQ4G0P3 5121 aa10.47□□□□□ -0.73
HDDC2-204ENST00000608295 E5RGE8 158 aa10.46□□□□□ -0.73
HDDC2-204ENST00000608295 MRPS12O15235 138 aaKnown RBP10.46□□□□□ -0.73
HDDC2-204ENST00000608295 CXCL3P19876 107 aa10.46□□□□□ -0.73
HDDC2-204ENST00000608295 PRR20EP86478 221 aa10.46□□□□□ -0.73
HDDC2-204ENST00000608295 PRR20CP86479 221 aa10.46□□□□□ -0.73
HDDC2-204ENST00000608295 PRR20DP86480 221 aa10.46□□□□□ -0.73
HDDC2-204ENST00000608295 PRR20BP86481 221 aa10.46□□□□□ -0.73
HDDC2-204ENST00000608295 PRR20AP86496 221 aa10.46□□□□□ -0.73
HDDC2-204ENST00000608295 VWC2Q2TAL6 325 aa10.46□□□□□ -0.73
HDDC2-204ENST00000608295 Q6ZTC4 211 aa10.46□□□□□ -0.73
HDDC2-204ENST00000608295 BAP18Q8IXM2 172 aa10.46□□□□□ -0.73
HDDC2-204ENST00000608295 SMIM3Q9BZL3 60 aa10.46□□□□□ -0.73
HDDC2-204ENST00000608295 KLK5Q9Y337 293 aaPredicted RBP10.46□□□□□ -0.73
HDDC2-204ENST00000608295 TRAV12-2A0A075B6T6 113 aa10.45□□□□□ -0.74
HDDC2-204ENST00000608295 A0A087X0K7 114 aa10.45□□□□□ -0.74
HDDC2-204ENST00000608295 ZNF705FA8MVS1 300 aaPredicted RBP10.45□□□□□ -0.74
HDDC2-204ENST00000608295 RHOBP62745 196 aa10.45□□□□□ -0.74
HDDC2-204ENST00000608295 PXDC1Q5TGL8 231 aa10.45□□□□□ -0.74
HDDC2-204ENST00000608295 S100A7AQ86SG5 101 aa10.45□□□□□ -0.74
HDDC2-204ENST00000608295 BPIFA4PQ86YQ2 179 aa10.45□□□□□ -0.74
HDDC2-204ENST00000608295 NPCDR1Q9BY65 106 aa10.45□□□□□ -0.74
HDDC2-204ENST00000608295 PARD6GQ9BYG4 376 aaPredicted RBP10.45□□□□□ -0.74
HDDC2-204ENST00000608295 SLC25A31Q9H0C2 315 aa10.45□□□□□ -0.74
HDDC2-204ENST00000608295 MBD2Q9UBB5 411 aa10.45□□□□□ -0.74
HDDC2-204ENST00000608295 H3BQ15 152 aa10.44□□□□□ -0.74
HDDC2-204ENST00000608295 PRM2P04554 102 aa10.44□□□□□ -0.74
HDDC2-204ENST00000608295 PSG3Q16557 428 aa10.44□□□□□ -0.74
HDDC2-204ENST00000608295 SPATA31B1PQ5VZV4 182 aa10.44□□□□□ -0.74
HDDC2-204ENST00000608295 LCN15Q6UWW0 184 aa10.44□□□□□ -0.74
HDDC2-204ENST00000608295 OR11H7Q8NGC8 314 aa10.44□□□□□ -0.74
HDDC2-204ENST00000608295 OR1L4Q8NGR5 311 aa10.44□□□□□ -0.74
HDDC2-204ENST00000608295 LINC00476Q8WZB0 136 aa10.44□□□□□ -0.74
HDDC2-204ENST00000608295 RPUSD4Q96CM3 377 aaKnown RBP10.44□□□□□ -0.74
HDDC2-204ENST00000608295 TMEM208Q9BTX3 173 aa10.44□□□□□ -0.74
HDDC2-204ENST00000608295 DNAJC4Q9NNZ3 241 aa10.44□□□□□ -0.74
HDDC2-204ENST00000608295 PPP1R14DQ9NXH3 145 aa10.44□□□□□ -0.74
HDDC2-204ENST00000608295 DNAH1Q9P2D7 4330 aa10.43□□□□□ -0.74
HDDC2-204ENST00000608295 PRAC2D3DTV9 90 aa10.43□□□□□ -0.74
HDDC2-204ENST00000608295 J3KRW8 73 aa10.43□□□□□ -0.74
HDDC2-204ENST00000608295 MPC2O95563 127 aa10.43□□□□□ -0.74
HDDC2-204ENST00000608295 PYYP10082 97 aa10.43□□□□□ -0.74
HDDC2-204ENST00000608295 RPL29P47914 159 aaKnown RBP10.43□□□□□ -0.74
HDDC2-204ENST00000608295 CYCSP99999 105 aaKnown RBP10.43□□□□□ -0.74
HDDC2-204ENST00000608295 ATP6V1FQ16864 119 aa10.43□□□□□ -0.74
HDDC2-204ENST00000608295 AMTNQ6UX39 209 aa10.43□□□□□ -0.74
HDDC2-204ENST00000608295 ZNF705AQ6ZN79 300 aaPredicted RBP10.43□□□□□ -0.74
HDDC2-204ENST00000608295 C1orf158Q8N1D5 194 aa10.43□□□□□ -0.74
HDDC2-204ENST00000608295 PFDN5Q99471 154 aa10.43□□□□□ -0.74
HDDC2-204ENST00000608295 ZNF331Q9NQX6 463 aaPredicted RBP10.43□□□□□ -0.74
HDDC2-204ENST00000608295 GOLT1BQ9Y3E0 138 aa10.43□□□□□ -0.74
HDDC2-204ENST00000608295 IGLL5B9A064 214 aa10.42□□□□□ -0.74
HDDC2-204ENST00000608295 EIF3GO75821 320 aaKnown RBP eCLIP10.42□□□□□ -0.74
HDDC2-204ENST00000608295 DUSP14O95147 198 aaKnown RBP10.42□□□□□ -0.74
HDDC2-204ENST00000608295 PET100P0DJ07 73 aa10.42□□□□□ -0.74
HDDC2-204ENST00000608295 OR8A1Q8NGG7 326 aa10.42□□□□□ -0.74
HDDC2-204ENST00000608295 BLNKQ8WV28 456 aa10.42□□□□□ -0.74
HDDC2-204ENST00000608295 RNF126Q9BV68 326 aa10.42□□□□□ -0.74
HDDC2-204ENST00000608295 ZNF705GA8MUZ8 300 aaPredicted RBP10.41□□□□□ -0.74
HDDC2-204ENST00000608295 BOLA2-SMG1P6H3BVE0 249 aa10.41□□□□□ -0.74
HDDC2-204ENST00000608295 PTTG1O95997 202 aa10.41□□□□□ -0.74
HDDC2-204ENST00000608295 INSP01308 110 aa10.41□□□□□ -0.74
HDDC2-204ENST00000608295 HBE1P02100 147 aa10.41□□□□□ -0.74
HDDC2-204ENST00000608295 IGLC2P0DOY2 106 aa10.41□□□□□ -0.74
HDDC2-204ENST00000608295 MIR17HGQ75NE6 70 aa10.41□□□□□ -0.74
HDDC2-204ENST00000608295 ATP5SQ99766 215 aa10.41□□□□□ -0.74
HDDC2-204ENST00000608295 SLC50A1Q9BRV3 221 aa10.41□□□□□ -0.74
HDDC2-204ENST00000608295 ZNF586Q9NXT0 402 aa10.41□□□□□ -0.74
HDDC2-204ENST00000608295 PLA2G2EQ9NZK7 142 aa10.41□□□□□ -0.74
HDDC2-204ENST00000608295 HSPB11Q9Y547 144 aa10.41□□□□□ -0.74
HDDC2-204ENST00000608295 RFNGQ9Y644 331 aa10.41□□□□□ -0.74
HDDC2-204ENST00000608295 LOC102723971A0A1B0GUV8 181 aa10.4□□□□□ -0.74
HDDC2-204ENST00000608295 HTN1P15515 57 aa10.4□□□□□ -0.74
HDDC2-204ENST00000608295 HTN3P15516 51 aa10.4□□□□□ -0.74
HDDC2-204ENST00000608295 CXCL2P19875 107 aa10.4□□□□□ -0.74
HDDC2-204ENST00000608295 FCN2Q15485 313 aa10.4□□□□□ -0.74
HDDC2-204ENST00000608295 CLUHP3Q96NS8 147 aa10.4□□□□□ -0.74
HDDC2-204ENST00000608295 WDR61Q9GZS3 305 aaKnown RBP10.4□□□□□ -0.74
HDDC2-204ENST00000608295 RNF24Q9Y225 148 aa10.4□□□□□ -0.74
HDDC2-204ENST00000608295 A8MTW9 85 aa10.39□□□□□ -0.75
HDDC2-204ENST00000608295 M0R3E3 92 aa10.39□□□□□ -0.75
HDDC2-204ENST00000608295 CRXO43186 299 aaPredicted RBP10.39□□□□□ -0.75
HDDC2-204ENST00000608295 MPDU1O75352 247 aa10.39□□□□□ -0.75
HDDC2-204ENST00000608295 RPL12P30050 165 aaKnown RBP10.39□□□□□ -0.75
HDDC2-204ENST00000608295 KIR3DS1Q14943 382 aa10.39□□□□□ -0.75
HDDC2-204ENST00000608295 C12orf74Q32Q52 190 aa10.39□□□□□ -0.75
HDDC2-204ENST00000608295 FAM222AQ5U5X8 452 aa10.39□□□□□ -0.75
HDDC2-204ENST00000608295 C2CD4CQ8TF44 421 aa10.39□□□□□ -0.75
HDDC2-204ENST00000608295 IGF2BP2-AS1Q96M15 143 aa10.39□□□□□ -0.75
HDDC2-204ENST00000608295 SLC25A2Q9BXI2 301 aa10.39□□□□□ -0.75
HDDC2-204ENST00000608295 HRH4Q9H3N8 390 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms