RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 ZNF767PQ75MW2 155 aa9.82□□□□□ -0.84
CTSA-218ENST00000607814 ZNF546Q86UE3 836 aa9.82□□□□□ -0.84
CTSA-218ENST00000607814 WDR83OSQ9Y284 106 aa9.82□□□□□ -0.84
CTSA-218ENST00000607814 DYNC1H1Q14204 4646 aaKnown RBP9.82□□□□□ -0.84
CTSA-218ENST00000607814 ELOA3CA0A087WX78 387 aaPredicted RBP9.81□□□□□ -0.84
CTSA-218ENST00000607814 A0A0J9YX75 114 aa9.81□□□□□ -0.84
CTSA-218ENST00000607814 C11orf94C9JXX5 98 aa9.81□□□□□ -0.84
CTSA-218ENST00000607814 COX7A2P2O60397 106 aa9.81□□□□□ -0.84
CTSA-218ENST00000607814 PRAF2O60831 178 aa9.81□□□□□ -0.84
CTSA-218ENST00000607814 FGF7P21781 194 aa9.81□□□□□ -0.84
CTSA-218ENST00000607814 ZNF709Q8N972 641 aa9.81□□□□□ -0.84
CTSA-218ENST00000607814 THAP6Q8TBB0 222 aa9.81□□□□□ -0.84
CTSA-218ENST00000607814 RPRMQ9NS64 109 aa9.81□□□□□ -0.84
CTSA-218ENST00000607814 APLNQ9ULZ1 77 aa9.81□□□□□ -0.84
CTSA-218ENST00000607814 ZNF705EA8MWA4 302 aaPredicted RBP9.8□□□□□ -0.84
CTSA-218ENST00000607814 MRPS12O15235 138 aaKnown RBP9.8□□□□□ -0.84
CTSA-218ENST00000607814 PRM2P04554 102 aa9.8□□□□□ -0.84
CTSA-218ENST00000607814 RPL7P18124 248 aaKnown RBP9.8□□□□□ -0.84
CTSA-218ENST00000607814 S100A11P31949 105 aa9.8□□□□□ -0.84
CTSA-218ENST00000607814 MEOX2P50222 304 aa9.8□□□□□ -0.84
CTSA-218ENST00000607814 NUTF2P61970 127 aaKnown RBP9.8□□□□□ -0.84
CTSA-218ENST00000607814 CLINT1Q14677 625 aa9.8□□□□□ -0.84
CTSA-218ENST00000607814 OPCMLQ14982 345 aa9.8□□□□□ -0.84
CTSA-218ENST00000607814 GCSAMLQ5JQS6 135 aa9.8□□□□□ -0.84
CTSA-218ENST00000607814 C10orf113Q5VZT2 155 aa9.8□□□□□ -0.84
CTSA-218ENST00000607814 STX12Q86Y82 276 aa9.8□□□□□ -0.84
CTSA-218ENST00000607814 ZNF738Q8NE65 137 aa9.8□□□□□ -0.84
CTSA-218ENST00000607814 LRRC20Q8TCA0 184 aa9.8□□□□□ -0.84
CTSA-218ENST00000607814 GPR82Q96P67 336 aa9.8□□□□□ -0.84
CTSA-218ENST00000607814 NMES1Q9C002 83 aa9.8□□□□□ -0.84
CTSA-218ENST00000607814 ZNF705FA8MVS1 300 aaPredicted RBP9.79□□□□□ -0.84
CTSA-218ENST00000607814 RLN2P04090 185 aa9.79□□□□□ -0.84
CTSA-218ENST00000607814 CNN1P51911 297 aaKnown RBP9.79□□□□□ -0.84
CTSA-218ENST00000607814 EMP1P54849 157 aa9.79□□□□□ -0.84
CTSA-218ENST00000607814 PSG9Q00887 426 aa9.79□□□□□ -0.84
CTSA-218ENST00000607814 RAB31Q13636 194 aa9.79□□□□□ -0.84
CTSA-218ENST00000607814 OXA1LQ15070 435 aa9.79□□□□□ -0.84
CTSA-218ENST00000607814 VWC2Q2TAL6 325 aa9.79□□□□□ -0.84
CTSA-218ENST00000607814 TMEM41BQ5BJD5 291 aa9.79□□□□□ -0.84
CTSA-218ENST00000607814 OR5C1Q8NGR4 320 aa9.79□□□□□ -0.84
CTSA-218ENST00000607814 PPP1R1CQ8WVI7 109 aa9.79□□□□□ -0.84
CTSA-218ENST00000607814 RNF126Q9BV68 326 aa9.79□□□□□ -0.84
CTSA-218ENST00000607814 DNAJC4Q9NNZ3 241 aa9.79□□□□□ -0.84
CTSA-218ENST00000607814 CELA1Q9UNI1 258 aa9.79□□□□□ -0.84
CTSA-218ENST00000607814 E5RGE8 158 aa9.78□□□□□ -0.84
CTSA-218ENST00000607814 H3BQ15 152 aa9.78□□□□□ -0.84
CTSA-218ENST00000607814 M0R2Z0 102 aa9.78□□□□□ -0.84
CTSA-218ENST00000607814 SLC17A3O00476 420 aa9.78□□□□□ -0.84
CTSA-218ENST00000607814 MIFP14174 115 aa9.78□□□□□ -0.84
CTSA-218ENST00000607814 CXCL3P19876 107 aa9.78□□□□□ -0.84
CTSA-218ENST00000607814 S100A7P31151 101 aa9.78□□□□□ -0.84
CTSA-218ENST00000607814 B2MP61769 119 aa9.78□□□□□ -0.84
CTSA-218ENST00000607814 HBG1P69891 147 aa9.78□□□□□ -0.84
CTSA-218ENST00000607814 HBG2P69892 147 aa9.78□□□□□ -0.84
CTSA-218ENST00000607814 Q6ZRG5 221 aa9.78□□□□□ -0.84
CTSA-218ENST00000607814 HRH4Q9H3N8 390 aa9.78□□□□□ -0.84
CTSA-218ENST00000607814 SLC39A9Q9NUM3 307 aa9.78□□□□□ -0.84
CTSA-218ENST00000607814 PLA2G2EQ9NZK7 142 aa9.78□□□□□ -0.84
CTSA-218ENST00000607814 TRAV12-2A0A075B6T6 113 aa9.77□□□□□ -0.85
CTSA-218ENST00000607814 IGLL5B9A064 214 aa9.77□□□□□ -0.85
CTSA-218ENST00000607814 PRAC2D3DTV9 90 aa9.77□□□□□ -0.85
CTSA-218ENST00000607814 HIST1H1AQ02539 215 aaPredicted RBP9.77□□□□□ -0.85
CTSA-218ENST00000607814 SPINK13Q1W4C9 94 aa9.77□□□□□ -0.85
CTSA-218ENST00000607814 AMTNQ6UX39 209 aa9.77□□□□□ -0.85
CTSA-218ENST00000607814 C1orf158Q8N1D5 194 aa9.77□□□□□ -0.85
CTSA-218ENST00000607814 C1QTNF4Q9BXJ3 329 aa9.77□□□□□ -0.85
CTSA-218ENST00000607814 SMIM3Q9BZL3 60 aa9.77□□□□□ -0.85
CTSA-218ENST00000607814 ALG5Q9Y673 324 aa9.77□□□□□ -0.85
CTSA-218ENST00000607814 PXMP4Q9Y6I8 212 aa9.77□□□□□ -0.85
CTSA-218ENST00000607814 A0A087X0K7 114 aa9.76□□□□□ -0.85
CTSA-218ENST00000607814 PRSS29PA6NIE9 313 aa9.76□□□□□ -0.85
CTSA-218ENST00000607814 MPC2O95563 127 aa9.76□□□□□ -0.85
CTSA-218ENST00000607814 RPL29P47914 159 aaKnown RBP9.76□□□□□ -0.85
CTSA-218ENST00000607814 RHOBP62745 196 aa9.76□□□□□ -0.85
CTSA-218ENST00000607814 PSG3Q16557 428 aa9.76□□□□□ -0.85
CTSA-218ENST00000607814 ATP6V1FQ16864 119 aa9.76□□□□□ -0.85
CTSA-218ENST00000607814 PXDC1Q5TGL8 231 aa9.76□□□□□ -0.85
CTSA-218ENST00000607814 SAMD13Q5VXD3 122 aa9.76□□□□□ -0.85
CTSA-218ENST00000607814 SPATA31B1PQ5VZV4 182 aa9.76□□□□□ -0.85
CTSA-218ENST00000607814 ZNF705AQ6ZN79 300 aaPredicted RBP9.76□□□□□ -0.85
CTSA-218ENST00000607814 Q6ZTC4 211 aa9.76□□□□□ -0.85
CTSA-218ENST00000607814 BPIFA4PQ86YQ2 179 aa9.76□□□□□ -0.85
CTSA-218ENST00000607814 OR11H7Q8NGC8 314 aa9.76□□□□□ -0.85
CTSA-218ENST00000607814 NPCDR1Q9BY65 106 aa9.76□□□□□ -0.85
CTSA-218ENST00000607814 PARD6GQ9BYG4 376 aaPredicted RBP9.76□□□□□ -0.85
CTSA-218ENST00000607814 SLC25A31Q9H0C2 315 aa9.76□□□□□ -0.85
CTSA-218ENST00000607814 RFNGQ9Y644 331 aa9.76□□□□□ -0.85
CTSA-218ENST00000607814 EIF3GO75821 320 aaKnown RBP eCLIP9.75□□□□□ -0.85
CTSA-218ENST00000607814 CYCSP99999 105 aaKnown RBP9.75□□□□□ -0.85
CTSA-218ENST00000607814 Q6ZNX1 250 aa9.75□□□□□ -0.85
CTSA-218ENST00000607814 BAP18Q8IXM2 172 aa9.75□□□□□ -0.85
CTSA-218ENST00000607814 RPUSD4Q96CM3 377 aaKnown RBP9.75□□□□□ -0.85
CTSA-218ENST00000607814 ZNF331Q9NQX6 463 aaPredicted RBP9.75□□□□□ -0.85
CTSA-218ENST00000607814 ZNF586Q9NXT0 402 aa9.75□□□□□ -0.85
CTSA-218ENST00000607814 MBD2Q9UBB5 411 aa9.75□□□□□ -0.85
CTSA-218ENST00000607814 HSPG2P98160 4391 aa9.75□□□□□ -0.85
CTSA-218ENST00000607814 CRXO43186 299 aaPredicted RBP9.74□□□□□ -0.85
CTSA-218ENST00000607814 IGLC2P0DOY2 106 aa9.74□□□□□ -0.85
CTSA-218ENST00000607814 PYYP10082 97 aa9.74□□□□□ -0.85
CTSA-218ENST00000607814 KIR3DS1Q14943 382 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms