RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 TMEM37Q8WXS4 190 aa16.13■□□□□ 0.17
SSBP4-209ENST00000601357 NIPSNAP3BQ9BS92 247 aa16.13■□□□□ 0.17
SSBP4-209ENST00000601357 NDUFAF3Q9BU61 184 aa16.13■□□□□ 0.17
SSBP4-209ENST00000601357 YTHDF2Q9Y5A9 579 aaKnown RBP16.13■□□□□ 0.17
SSBP4-209ENST00000601357 FAM240BA0A1B0GVZ2 78 aa16.12■□□□□ 0.17
SSBP4-209ENST00000601357 CXCL2P19875 107 aa16.12■□□□□ 0.17
SSBP4-209ENST00000601357 CAV2P51636 162 aa16.12■□□□□ 0.17
SSBP4-209ENST00000601357 PSG3Q16557 428 aa16.12■□□□□ 0.17
SSBP4-209ENST00000601357 VWC2Q2TAL6 325 aa16.12■□□□□ 0.17
SSBP4-209ENST00000601357 OR8A1Q8NGG7 326 aa16.12■□□□□ 0.17
SSBP4-209ENST00000601357 HECTD4Q9Y4D8 3996 aa16.12■□□□□ 0.17
SSBP4-209ENST00000601357 CST7O76096 145 aa16.11■□□□□ 0.17
SSBP4-209ENST00000601357 INSP01308 110 aa16.11■□□□□ 0.17
SSBP4-209ENST00000601357 BCAP31P51572 246 aa16.11■□□□□ 0.17
SSBP4-209ENST00000601357 ASAH1Q13510 395 aa16.11■□□□□ 0.17
SSBP4-209ENST00000601357 MORN5Q5VZ52 161 aa16.11■□□□□ 0.17
SSBP4-209ENST00000601357 S100ZQ8WXG8 99 aa16.11■□□□□ 0.17
SSBP4-209ENST00000601357 TMEM208Q9BTX3 173 aa16.11■□□□□ 0.17
SSBP4-209ENST00000601357 ZNF331Q9NQX6 463 aaPredicted RBP16.11■□□□□ 0.17
SSBP4-209ENST00000601357 PLA2G2EQ9NZK7 142 aa16.11■□□□□ 0.17
SSBP4-209ENST00000601357 WDR83OSQ9Y284 106 aa16.11■□□□□ 0.17
SSBP4-209ENST00000601357 FAM24AA6NFZ4 105 aa16.1■□□□□ 0.17
SSBP4-209ENST00000601357 BOLA2-SMG1P6H3BVE0 249 aa16.1■□□□□ 0.17
SSBP4-209ENST00000601357 COX7A2P2O60397 106 aa16.1■□□□□ 0.17
SSBP4-209ENST00000601357 CAMLGP49069 296 aa16.1■□□□□ 0.17
SSBP4-209ENST00000601357 MZT2BQ6NZ67 158 aa16.1■□□□□ 0.17
SSBP4-209ENST00000601357 LCN15Q6UWW0 184 aa16.1■□□□□ 0.17
SSBP4-209ENST00000601357 BAP18Q8IXM2 172 aa16.1■□□□□ 0.17
SSBP4-209ENST00000601357 FAM210BQ96KR6 192 aa16.1■□□□□ 0.17
SSBP4-209ENST00000601357 LYRM2Q9NU23 88 aaPredicted RBP16.1■□□□□ 0.17
SSBP4-209ENST00000601357 HIST1H1AQ02539 215 aaPredicted RBP16.09■□□□□ 0.17
SSBP4-209ENST00000601357 NRARPQ7Z6K4 114 aa16.09■□□□□ 0.17
SSBP4-209ENST00000601357 BPIFA4PQ86YQ2 179 aa16.09■□□□□ 0.17
SSBP4-209ENST00000601357 LRRC20Q8TCA0 184 aa16.09■□□□□ 0.17
SSBP4-209ENST00000601357 UQCC1Q9NVA1 299 aa16.09■□□□□ 0.17
SSBP4-209ENST00000601357 IGSF23A1L1A6 192 aa16.08■□□□□ 0.16
SSBP4-209ENST00000601357 PRM2P04554 102 aa16.08■□□□□ 0.16
SSBP4-209ENST00000601357 P0DMU3 169 aa16.08■□□□□ 0.16
SSBP4-209ENST00000601357 FAM231AP0DMU4 169 aa16.08■□□□□ 0.16
SSBP4-209ENST00000601357 FAM231CP0DMU5 169 aa16.08■□□□□ 0.16
SSBP4-209ENST00000601357 IGLC2P0DOY2 106 aa16.08■□□□□ 0.16
SSBP4-209ENST00000601357 PVALBP20472 110 aaPredicted RBP16.08■□□□□ 0.16
SSBP4-209ENST00000601357 SULT1A1P50225 295 aa16.08■□□□□ 0.16
SSBP4-209ENST00000601357 B2MP61769 119 aa16.08■□□□□ 0.16
SSBP4-209ENST00000601357 RAB31Q13636 194 aa16.08■□□□□ 0.16
SSBP4-209ENST00000601357 RAB32Q13637 225 aa16.08■□□□□ 0.16
SSBP4-209ENST00000601357 OPCMLQ14982 345 aa16.08■□□□□ 0.16
SSBP4-209ENST00000601357 C10orf113Q5VZT2 155 aa16.08■□□□□ 0.16
SSBP4-209ENST00000601357 RPUSD4Q96CM3 377 aaKnown RBP16.08■□□□□ 0.16
SSBP4-209ENST00000601357 SLC50A1Q9BRV3 221 aa16.08■□□□□ 0.16
SSBP4-209ENST00000601357 TRAV12-2A0A075B6T6 113 aa16.07■□□□□ 0.16
SSBP4-209ENST00000601357 ZNF705GA8MUZ8 300 aaPredicted RBP16.07■□□□□ 0.16
SSBP4-209ENST00000601357 TSPOP30536 169 aa16.07■□□□□ 0.16
SSBP4-209ENST00000601357 S100A10P60903 97 aa16.07■□□□□ 0.16
SSBP4-209ENST00000601357 TMEM252Q8N6L7 170 aa16.07■□□□□ 0.16
SSBP4-209ENST00000601357 POM121L12Q8N7R1 296 aa16.07■□□□□ 0.16
SSBP4-209ENST00000601357 DNAJC4Q9NNZ3 241 aa16.07■□□□□ 0.16
SSBP4-209ENST00000601357 PLAC8L1A1L4L8 177 aa16.06■□□□□ 0.16
SSBP4-209ENST00000601357 SLC17A3O00476 420 aa16.06■□□□□ 0.16
SSBP4-209ENST00000601357 SNRPCP09234 159 aaKnown RBP16.06■□□□□ 0.16
SSBP4-209ENST00000601357 S100A11P31949 105 aa16.06■□□□□ 0.16
SSBP4-209ENST00000601357 MIC13Q5XKP0 118 aa16.06■□□□□ 0.16
SSBP4-209ENST00000601357 Q6ZRG5 221 aa16.06■□□□□ 0.16
SSBP4-209ENST00000601357 CHAC2Q8WUX2 184 aa16.06■□□□□ 0.16
SSBP4-209ENST00000601357 SAT2Q96F10 170 aaPredicted RBP16.06■□□□□ 0.16
SSBP4-209ENST00000601357 H3BQ15 152 aa16.05■□□□□ 0.16
SSBP4-209ENST00000601357 PRB4P10163 310 aaPredicted RBP16.05■□□□□ 0.16
SSBP4-209ENST00000601357 RPL29P47914 159 aaKnown RBP16.05■□□□□ 0.16
SSBP4-209ENST00000601357 RHOBP62745 196 aa16.05■□□□□ 0.16
SSBP4-209ENST00000601357 UPK1BO75841 260 aa16.04■□□□□ 0.16
SSBP4-209ENST00000601357 AZU1P20160 251 aa16.04■□□□□ 0.16
SSBP4-209ENST00000601357 DAD1P61803 113 aa16.04■□□□□ 0.16
SSBP4-209ENST00000601357 HBG1P69891 147 aa16.04■□□□□ 0.16
SSBP4-209ENST00000601357 HBG2P69892 147 aa16.04■□□□□ 0.16
SSBP4-209ENST00000601357 STX12Q86Y82 276 aa16.04■□□□□ 0.16
SSBP4-209ENST00000601357 TMEM256Q8N2U0 113 aa16.04■□□□□ 0.16
SSBP4-209ENST00000601357 TRAV5A0A0B4J249 113 aa16.03■□□□□ 0.16
SSBP4-209ENST00000601357 UBE2L5PA0A1B0GUS4 154 aa16.03■□□□□ 0.16
SSBP4-209ENST00000601357 A6NHS1 94 aa16.03■□□□□ 0.16
SSBP4-209ENST00000601357 LYRM9A8MSI8 78 aa16.03■□□□□ 0.16
SSBP4-209ENST00000601357 H3BTX0 84 aa16.03■□□□□ 0.16
SSBP4-209ENST00000601357 OR1L4Q8NGR5 311 aa16.03■□□□□ 0.16
SSBP4-209ENST00000601357 PFDN5Q99471 154 aa16.03■□□□□ 0.16
SSBP4-209ENST00000601357 SLC39A9Q9NUM3 307 aa16.03■□□□□ 0.16
SSBP4-209ENST00000601357 PXMP4Q9Y6I8 212 aa16.03■□□□□ 0.16
SSBP4-209ENST00000601357 HTN3P15516 51 aa16.02■□□□□ 0.16
SSBP4-209ENST00000601357 CDKN1BP46527 198 aa16.02■□□□□ 0.16
SSBP4-209ENST00000601357 IFITM3Q01628 133 aa16.02■□□□□ 0.16
SSBP4-209ENST00000601357 BAXQ07812 192 aa16.02■□□□□ 0.16
SSBP4-209ENST00000601357 GUK1Q16774 197 aa16.02■□□□□ 0.16
SSBP4-209ENST00000601357 PPP1R14DQ9NXH3 145 aa16.02■□□□□ 0.16
SSBP4-209ENST00000601357 DNAH2Q9P225 4427 aa16.01■□□□□ 0.15
SSBP4-209ENST00000601357 PRAC2D3DTV9 90 aa16.01■□□□□ 0.15
SSBP4-209ENST00000601357 TAS2R60P59551 318 aa16.01■□□□□ 0.15
SSBP4-209ENST00000601357 ATP6V1FQ16864 119 aa16.01■□□□□ 0.15
SSBP4-209ENST00000601357 ENKURQ8TC29 256 aa16.01■□□□□ 0.15
SSBP4-209ENST00000601357 LINC01587Q99440 93 aa16.01■□□□□ 0.15
SSBP4-209ENST00000601357 GPN1Q9HCN4 374 aaPredicted RBP16.01■□□□□ 0.15
SSBP4-209ENST00000601357 FAT2Q9NYQ8 4349 aa16.01■□□□□ 0.15
SSBP4-209ENST00000601357 ZNF586Q9NXT0 402 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms