RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 SNRPCP09234 159 aaKnown RBP9.3□□□□□ -0.92
LIG1-212ENST00000596549 BCAP31P51572 246 aa9.3□□□□□ -0.92
LIG1-212ENST00000596549 S100A10P60903 97 aa9.3□□□□□ -0.92
LIG1-212ENST00000596549 IFITM3Q01628 133 aa9.3□□□□□ -0.92
LIG1-212ENST00000596549 OPCMLQ14982 345 aa9.3□□□□□ -0.92
LIG1-212ENST00000596549 VWC2Q2TAL6 325 aa9.3□□□□□ -0.92
LIG1-212ENST00000596549 PXDC1Q5TGL8 231 aa9.3□□□□□ -0.92
LIG1-212ENST00000596549 FAM222AQ5U5X8 452 aa9.3□□□□□ -0.92
LIG1-212ENST00000596549 LINC00305Q7Z4B0 112 aa9.3□□□□□ -0.92
LIG1-212ENST00000596549 LYRM2Q9NU23 88 aaPredicted RBP9.3□□□□□ -0.92
LIG1-212ENST00000596549 YTHDF2Q9Y5A9 579 aaKnown RBP9.3□□□□□ -0.92
LIG1-212ENST00000596549 DNAH10Q8IVF4 4471 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 UBE2L5PA0A1B0GUS4 154 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 A6NHS1 94 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 BOLA2-SMG1P6H3BVE0 249 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 COX7A2P2O60397 106 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 UPK1BO75841 260 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 DUSP14O95147 198 aaKnown RBP9.29□□□□□ -0.92
LIG1-212ENST00000596549 HBE1P02100 147 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 PRM2P04554 102 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 SPART-AS1P0CW21 52 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 CXCL2P19875 107 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 HIST1H1AQ02539 215 aaPredicted RBP9.29□□□□□ -0.92
LIG1-212ENST00000596549 MIC13Q5XKP0 118 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 NRARPQ7Z6K4 114 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 TMEM252Q8N6L7 170 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 OR8A1Q8NGG7 326 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 S100ZQ8WXG8 99 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 ZNF331Q9NQX6 463 aaPredicted RBP9.29□□□□□ -0.92
LIG1-212ENST00000596549 PLA2G2EQ9NZK7 142 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 WDR83OSQ9Y284 106 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 DNAH6Q9C0G6 4158 aa9.29□□□□□ -0.92
LIG1-212ENST00000596549 TRAV12-2A0A075B6T6 113 aa9.28□□□□□ -0.92
LIG1-212ENST00000596549 H3BTX0 84 aa9.28□□□□□ -0.92
LIG1-212ENST00000596549 INSP01308 110 aa9.28□□□□□ -0.92
LIG1-212ENST00000596549 IGLC2P0DOY2 106 aa9.28□□□□□ -0.92
LIG1-212ENST00000596549 CAMLGP49069 296 aa9.28□□□□□ -0.92
LIG1-212ENST00000596549 PSG3Q16557 428 aa9.28□□□□□ -0.92
LIG1-212ENST00000596549 RRN3P1Q2M238 152 aa9.28□□□□□ -0.92
LIG1-212ENST00000596549 MZT2BQ6NZ67 158 aa9.28□□□□□ -0.92
LIG1-212ENST00000596549 LCN15Q6UWW0 184 aa9.28□□□□□ -0.92
LIG1-212ENST00000596549 NIPSNAP3BQ9BS92 247 aa9.28□□□□□ -0.92
LIG1-212ENST00000596549 UQCC1Q9NVA1 299 aa9.28□□□□□ -0.92
LIG1-212ENST00000596549 NACAE9PAV3 2078 aa9.28□□□□□ -0.92
LIG1-212ENST00000596549 TEX48A0A1B0GUV7 120 aa9.27□□□□□ -0.93
LIG1-212ENST00000596549 PLAC8L1A1L4L8 177 aa9.27□□□□□ -0.93
LIG1-212ENST00000596549 SULT1A1P50225 295 aa9.27□□□□□ -0.93
LIG1-212ENST00000596549 C10orf113Q5VZT2 155 aa9.27□□□□□ -0.93
LIG1-212ENST00000596549 S100A7AQ86SG5 101 aa9.27□□□□□ -0.93
LIG1-212ENST00000596549 SLC50A1Q9BRV3 221 aa9.27□□□□□ -0.93
LIG1-212ENST00000596549 PTTG2Q9NZH5 202 aa9.27□□□□□ -0.93
LIG1-212ENST00000596549 TRAV5A0A0B4J249 113 aa9.26□□□□□ -0.93
LIG1-212ENST00000596549 ZNF705GA8MUZ8 300 aaPredicted RBP9.26□□□□□ -0.93
LIG1-212ENST00000596549 H3BQ15 152 aa9.26□□□□□ -0.93
LIG1-212ENST00000596549 SIX6O95475 246 aa9.26□□□□□ -0.93
LIG1-212ENST00000596549 PVALBP20472 110 aaPredicted RBP9.26□□□□□ -0.93
LIG1-212ENST00000596549 BAXQ07812 192 aa9.26□□□□□ -0.93
LIG1-212ENST00000596549 OXA1LQ15070 435 aa9.26□□□□□ -0.93
LIG1-212ENST00000596549 BPIFA4PQ86YQ2 179 aa9.26□□□□□ -0.93
LIG1-212ENST00000596549 ENKURQ8TC29 256 aa9.26□□□□□ -0.93
LIG1-212ENST00000596549 RPUSD4Q96CM3 377 aaKnown RBP9.26□□□□□ -0.93
LIG1-212ENST00000596549 SAT2Q96F10 170 aaPredicted RBP9.26□□□□□ -0.93
LIG1-212ENST00000596549 TMEM208Q9BTX3 173 aa9.26□□□□□ -0.93
LIG1-212ENST00000596549 NDUFAF3Q9BU61 184 aa9.26□□□□□ -0.93
LIG1-212ENST00000596549 PARD6GQ9BYG4 376 aaPredicted RBP9.26□□□□□ -0.93
LIG1-212ENST00000596549 RNF24Q9Y225 148 aa9.26□□□□□ -0.93
LIG1-212ENST00000596549 PRAC2D3DTV9 90 aa9.25□□□□□ -0.93
LIG1-212ENST00000596549 RPL29P47914 159 aaKnown RBP9.25□□□□□ -0.93
LIG1-212ENST00000596549 B2MP61769 119 aa9.25□□□□□ -0.93
LIG1-212ENST00000596549 KIR3DS1Q14943 382 aa9.25□□□□□ -0.93
LIG1-212ENST00000596549 STX12Q86Y82 276 aa9.25□□□□□ -0.93
LIG1-212ENST00000596549 LRRC20Q8TCA0 184 aa9.25□□□□□ -0.93
LIG1-212ENST00000596549 SLC39A9Q9NUM3 307 aa9.25□□□□□ -0.93
LIG1-212ENST00000596549 OR5AC2Q9NZP5 309 aa9.25□□□□□ -0.93
LIG1-212ENST00000596549 PXMP4Q9Y6I8 212 aa9.25□□□□□ -0.93
LIG1-212ENST00000596549 AZU1P20160 251 aa9.24□□□□□ -0.93
LIG1-212ENST00000596549 FGF7P21781 194 aa9.24□□□□□ -0.93
LIG1-212ENST00000596549 TSPOP30536 169 aa9.24□□□□□ -0.93
LIG1-212ENST00000596549 S100A11P31949 105 aa9.24□□□□□ -0.93
LIG1-212ENST00000596549 RHOBP62745 196 aa9.24□□□□□ -0.93
LIG1-212ENST00000596549 HBG1P69891 147 aa9.24□□□□□ -0.93
LIG1-212ENST00000596549 HBG2P69892 147 aa9.24□□□□□ -0.93
LIG1-212ENST00000596549 Q6ZRG5 221 aa9.24□□□□□ -0.93
LIG1-212ENST00000596549 OR1L4Q8NGR5 311 aa9.24□□□□□ -0.93
LIG1-212ENST00000596549 GPN1Q9HCN4 374 aaPredicted RBP9.24□□□□□ -0.93
LIG1-212ENST00000596549 ZNF586Q9NXT0 402 aa9.24□□□□□ -0.93
LIG1-212ENST00000596549 H0YIZ8 118 aa9.23□□□□□ -0.93
LIG1-212ENST00000596549 HTN3P15516 51 aa9.23□□□□□ -0.93
LIG1-212ENST00000596549 CDKN1BP46527 198 aa9.23□□□□□ -0.93
LIG1-212ENST00000596549 DAD1P61803 113 aa9.23□□□□□ -0.93
LIG1-212ENST00000596549 NHLH2Q02577 135 aa9.23□□□□□ -0.93
LIG1-212ENST00000596549 RAB31Q13636 194 aa9.23□□□□□ -0.93
LIG1-212ENST00000596549 LRRC37A5PQ49AS3 106 aa9.23□□□□□ -0.93
LIG1-212ENST00000596549 GCSAMLQ5JQS6 135 aa9.23□□□□□ -0.93
LIG1-212ENST00000596549 CHAC2Q8WUX2 184 aa9.23□□□□□ -0.93
LIG1-212ENST00000596549 PFDN5Q99471 154 aa9.23□□□□□ -0.93
LIG1-212ENST00000596549 NPCDR1Q9BY65 106 aa9.23□□□□□ -0.93
LIG1-212ENST00000596549 DNAJC4Q9NNZ3 241 aa9.23□□□□□ -0.93
LIG1-212ENST00000596549 HECTD4Q9Y4D8 3996 aa9.22□□□□□ -0.93
LIG1-212ENST00000596549 PRAF2O60831 178 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms