RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ZNF705GA8MUZ8 300 aaPredicted RBP13.31□□□□□ -0.28
CCDC43-205ENST00000592333 IAH1Q2TAA2 248 aaPredicted RBP13.31□□□□□ -0.28
CCDC43-205ENST00000592333 LCN15Q6UWW0 184 aa13.31□□□□□ -0.28
CCDC43-205ENST00000592333 ZNF493Q6ZR52 646 aa13.31□□□□□ -0.28
CCDC43-205ENST00000592333 MITD1Q8WV92 249 aa13.31□□□□□ -0.28
CCDC43-205ENST00000592333 ARL6Q9H0F7 186 aa13.31□□□□□ -0.28
CCDC43-205ENST00000592333 ARV1Q9H2C2 271 aa13.31□□□□□ -0.28
CCDC43-205ENST00000592333 PPP1R14DQ9NXH3 145 aa13.31□□□□□ -0.28
CCDC43-205ENST00000592333 MRPS12O15235 138 aaKnown RBP13.3□□□□□ -0.28
CCDC43-205ENST00000592333 METTL15P1P0C7V9 234 aa13.3□□□□□ -0.28
CCDC43-205ENST00000592333 PATE2Q6UY27 113 aa13.3□□□□□ -0.28
CCDC43-205ENST00000592333 C16orf74Q96GX8 76 aa13.3□□□□□ -0.28
CCDC43-205ENST00000592333 UHRF2Q96PU4 802 aa13.3□□□□□ -0.28
CCDC43-205ENST00000592333 FLVCR2Q9UPI3 526 aa13.3□□□□□ -0.28
CCDC43-205ENST00000592333 PKHD1P08F94 4074 aa13.29□□□□□ -0.28
CCDC43-205ENST00000592333 PLAC8L1A1L4L8 177 aa13.29□□□□□ -0.28
CCDC43-205ENST00000592333 CBY3A6NI87 242 aa13.29□□□□□ -0.28
CCDC43-205ENST00000592333 GOSR2O14653 212 aa13.29□□□□□ -0.28
CCDC43-205ENST00000592333 ATP5G1P05496 136 aa13.29□□□□□ -0.28
CCDC43-205ENST00000592333 ANXA7P20073 488 aaKnown RBP13.29□□□□□ -0.28
CCDC43-205ENST00000592333 CDKN1BP46527 198 aa13.29□□□□□ -0.28
CCDC43-205ENST00000592333 ATP5G3P48201 142 aa13.29□□□□□ -0.28
CCDC43-205ENST00000592333 RRAS2P62070 204 aaPredicted RBP13.29□□□□□ -0.28
CCDC43-205ENST00000592333 RHOBP62745 196 aa13.29□□□□□ -0.28
CCDC43-205ENST00000592333 HIST1H1AQ02539 215 aaPredicted RBP13.29□□□□□ -0.28
CCDC43-205ENST00000592333 C1orf134Q5TEV5 83 aa13.29□□□□□ -0.28
CCDC43-205ENST00000592333 BPIFA4PQ86YQ2 179 aa13.29□□□□□ -0.28
CCDC43-205ENST00000592333 BAP18Q8IXM2 172 aa13.29□□□□□ -0.28
CCDC43-205ENST00000592333 ZBTB8BQ8NAP8 495 aaPredicted RBP13.29□□□□□ -0.28
CCDC43-205ENST00000592333 LINC01587Q99440 93 aa13.29□□□□□ -0.28
CCDC43-205ENST00000592333 ZNF331Q9NQX6 463 aaPredicted RBP13.29□□□□□ -0.28
CCDC43-205ENST00000592333 IGLV2-18A0A075B6J9 118 aa13.28□□□□□ -0.28
CCDC43-205ENST00000592333 BTCP35070 178 aa13.28□□□□□ -0.28
CCDC43-205ENST00000592333 LINC00305Q7Z4B0 112 aa13.28□□□□□ -0.28
CCDC43-205ENST00000592333 RPUSD4Q96CM3 377 aaKnown RBP13.28□□□□□ -0.28
CCDC43-205ENST00000592333 RCL1Q9Y2P8 373 aaKnown RBP13.28□□□□□ -0.28
CCDC43-205ENST00000592333 TIMM8BQ9Y5J9 83 aaPredicted RBP13.28□□□□□ -0.28
CCDC43-205ENST00000592333 TRAV12-2A0A075B6T6 113 aa13.27□□□□□ -0.29
CCDC43-205ENST00000592333 C7orf66A4D0T2 115 aa13.27□□□□□ -0.29
CCDC43-205ENST00000592333 H7BYZ3 331 aa13.27□□□□□ -0.29
CCDC43-205ENST00000592333 AGPAT2O15120 278 aa13.27□□□□□ -0.29
CCDC43-205ENST00000592333 CCNKO75909 580 aa13.27□□□□□ -0.29
CCDC43-205ENST00000592333 DEFB130BP0DP73 79 aa13.27□□□□□ -0.29
CCDC43-205ENST00000592333 DEFB130AP0DP74 79 aa13.27□□□□□ -0.29
CCDC43-205ENST00000592333 SDHCQ99643 169 aaPredicted RBP13.27□□□□□ -0.29
CCDC43-205ENST00000592333 ATG101Q9BSB4 218 aa13.27□□□□□ -0.29
CCDC43-205ENST00000592333 PCLOQ9Y6V0 5065 aa13.26□□□□□ -0.29
CCDC43-205ENST00000592333 SCGB1D2O95969 90 aa13.26□□□□□ -0.29
CCDC43-205ENST00000592333 AZU1P20160 251 aa13.26□□□□□ -0.29
CCDC43-205ENST00000592333 SLC38A11Q08AI6 406 aa13.26□□□□□ -0.29
CCDC43-205ENST00000592333 RAB31Q13636 194 aa13.26□□□□□ -0.29
CCDC43-205ENST00000592333 TMEM263Q8WUH6 116 aaKnown RBP13.26□□□□□ -0.29
CCDC43-205ENST00000592333 GSKIPQ9P0R6 139 aa13.26□□□□□ -0.29
CCDC43-205ENST00000592333 PXMP4Q9Y6I8 212 aa13.26□□□□□ -0.29
CCDC43-205ENST00000592333 NACAE9PAV3 2078 aa13.25□□□□□ -0.29
CCDC43-205ENST00000592333 MBPP02686 304 aaPredicted RBP13.25□□□□□ -0.29
CCDC43-205ENST00000592333 CCL18P55774 89 aa13.25□□□□□ -0.29
CCDC43-205ENST00000592333 GUK1Q16774 197 aa13.25□□□□□ -0.29
CCDC43-205ENST00000592333 RNASE8Q8TDE3 154 aaKnown RBP13.25□□□□□ -0.29
CCDC43-205ENST00000592333 PKD1P98161 4303 aa13.25□□□□□ -0.29
CCDC43-205ENST00000592333 F5H768 121 aa13.24□□□□□ -0.29
CCDC43-205ENST00000592333 COX7A2P2O60397 106 aa13.24□□□□□ -0.29
CCDC43-205ENST00000592333 PRM2P04554 102 aa13.24□□□□□ -0.29
CCDC43-205ENST00000592333 IL7P13232 177 aa13.24□□□□□ -0.29
CCDC43-205ENST00000592333 ZNF846Q147U1 533 aa13.24□□□□□ -0.29
CCDC43-205ENST00000592333 Q6ZRG5 221 aa13.24□□□□□ -0.29
CCDC43-205ENST00000592333 OR10J6PQ8NGY7 276 aa13.24□□□□□ -0.29
CCDC43-205ENST00000592333 TMEM37Q8WXS4 190 aa13.24□□□□□ -0.29
CCDC43-205ENST00000592333 L7N2F9 121 aa13.23□□□□□ -0.29
CCDC43-205ENST00000592333 IGLC2P0DOY2 106 aa13.23□□□□□ -0.29
CCDC43-205ENST00000592333 VAMP2P63027 116 aa13.23□□□□□ -0.29
CCDC43-205ENST00000592333 ARL16Q0P5N6 197 aa13.23□□□□□ -0.29
CCDC43-205ENST00000592333 C10orf113Q5VZT2 155 aa13.23□□□□□ -0.29
CCDC43-205ENST00000592333 ZNF503Q96F45 646 aa13.23□□□□□ -0.29
CCDC43-205ENST00000592333 ODF3Q96PU9 254 aa13.23□□□□□ -0.29
CCDC43-205ENST00000592333 MGST2Q99735 147 aa13.23□□□□□ -0.29
CCDC43-205ENST00000592333 DNAJC4Q9NNZ3 241 aa13.23□□□□□ -0.29
CCDC43-205ENST00000592333 ZNF253O75346 499 aa13.22□□□□□ -0.29
CCDC43-205ENST00000592333 CAMLGP49069 296 aa13.22□□□□□ -0.29
CCDC43-205ENST00000592333 CCDC28AQ8IWP9 274 aa13.22□□□□□ -0.29
CCDC43-205ENST00000592333 LINC00612Q8N6U2 182 aa13.22□□□□□ -0.29
CCDC43-205ENST00000592333 OR1L4Q8NGR5 311 aa13.22□□□□□ -0.29
CCDC43-205ENST00000592333 ZNRF2Q8NHG8 242 aa13.22□□□□□ -0.29
CCDC43-205ENST00000592333 CHAC2Q8WUX2 184 aa13.22□□□□□ -0.29
CCDC43-205ENST00000592333 SAT2Q96F10 170 aaPredicted RBP13.22□□□□□ -0.29
CCDC43-205ENST00000592333 PFDN5Q99471 154 aa13.22□□□□□ -0.29
CCDC43-205ENST00000592333 C20orf85Q9H1P6 137 aa13.22□□□□□ -0.29
CCDC43-205ENST00000592333 DNAH11Q96DT5 4516 aa13.21□□□□□ -0.29
CCDC43-205ENST00000592333 NBDYA0A0U1RRE5 68 aa13.21□□□□□ -0.29
CCDC43-205ENST00000592333 LINC00854A0A1B0GVQ3 168 aa13.21□□□□□ -0.29
CCDC43-205ENST00000592333 FCN2Q15485 313 aa13.21□□□□□ -0.29
CCDC43-205ENST00000592333 LYRM1O43325 122 aa13.2□□□□□ -0.3
CCDC43-205ENST00000592333 NUDT3O95989 172 aa13.2□□□□□ -0.3
CCDC43-205ENST00000592333 HTN1P15515 57 aa13.2□□□□□ -0.3
CCDC43-205ENST00000592333 PVALBP20472 110 aaPredicted RBP13.2□□□□□ -0.3
CCDC43-205ENST00000592333 OPCMLQ14982 345 aa13.2□□□□□ -0.3
CCDC43-205ENST00000592333 VWC2Q2TAL6 325 aa13.2□□□□□ -0.3
CCDC43-205ENST00000592333 C12orf45Q8N5I9 185 aaPredicted RBP13.2□□□□□ -0.3
CCDC43-205ENST00000592333 MRPL53Q96EL3 112 aaKnown RBP13.2□□□□□ -0.3
CCDC43-205ENST00000592333 NOP10Q9NPE3 64 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms