RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 RLN2P04090 185 aa9.41□□□□□ -0.9
CNOT1-220ENST00000569916 ZNF705DP0CH99 300 aaPredicted RBP9.41□□□□□ -0.9
CNOT1-220ENST00000569916 ZNF705BP0CI00 300 aaPredicted RBP9.41□□□□□ -0.9
CNOT1-220ENST00000569916 CXCL3P19876 107 aa9.41□□□□□ -0.9
CNOT1-220ENST00000569916 FGF7P21781 194 aa9.41□□□□□ -0.9
CNOT1-220ENST00000569916 HLA-DMBP28068 263 aa9.41□□□□□ -0.9
CNOT1-220ENST00000569916 RPL29P47914 159 aaKnown RBP9.41□□□□□ -0.9
CNOT1-220ENST00000569916 PSG9Q00887 426 aa9.41□□□□□ -0.9
CNOT1-220ENST00000569916 NHLH2Q02577 135 aa9.41□□□□□ -0.9
CNOT1-220ENST00000569916 AMTNQ6UX39 209 aa9.41□□□□□ -0.9
CNOT1-220ENST00000569916 CHAC2Q8WUX2 184 aa9.41□□□□□ -0.9
CNOT1-220ENST00000569916 PPP1R1CQ8WVI7 109 aa9.41□□□□□ -0.9
CNOT1-220ENST00000569916 CXCL2P19875 107 aa9.4□□□□□ -0.9
CNOT1-220ENST00000569916 B2MP61769 119 aa9.4□□□□□ -0.9
CNOT1-220ENST00000569916 Q6ZRG5 221 aa9.4□□□□□ -0.9
CNOT1-220ENST00000569916 BPIFA4PQ86YQ2 179 aa9.4□□□□□ -0.9
CNOT1-220ENST00000569916 ZNF738Q8NE65 137 aa9.4□□□□□ -0.9
CNOT1-220ENST00000569916 OR5C1Q8NGR4 320 aa9.4□□□□□ -0.9
CNOT1-220ENST00000569916 OR1L4Q8NGR5 311 aa9.4□□□□□ -0.9
CNOT1-220ENST00000569916 NEU1Q99519 415 aa9.4□□□□□ -0.9
CNOT1-220ENST00000569916 SLC25A31Q9H0C2 315 aa9.4□□□□□ -0.9
CNOT1-220ENST00000569916 HRH4Q9H3N8 390 aa9.4□□□□□ -0.9
CNOT1-220ENST00000569916 DNAJC4Q9NNZ3 241 aa9.4□□□□□ -0.9
CNOT1-220ENST00000569916 SLC39A9Q9NUM3 307 aa9.4□□□□□ -0.9
CNOT1-220ENST00000569916 PXMP4Q9Y6I8 212 aa9.4□□□□□ -0.9
CNOT1-220ENST00000569916 MPDU1O75352 247 aa9.39□□□□□ -0.91
CNOT1-220ENST00000569916 DUSP14O95147 198 aaKnown RBP9.39□□□□□ -0.91
CNOT1-220ENST00000569916 PTTG1O95997 202 aa9.39□□□□□ -0.91
CNOT1-220ENST00000569916 SNRPCP09234 159 aaKnown RBP9.39□□□□□ -0.91
CNOT1-220ENST00000569916 IGLC2P0DOY2 106 aa9.39□□□□□ -0.91
CNOT1-220ENST00000569916 CNN1P51911 297 aaKnown RBP9.39□□□□□ -0.91
CNOT1-220ENST00000569916 PSG3Q16557 428 aa9.39□□□□□ -0.91
CNOT1-220ENST00000569916 LCN15Q6UWW0 184 aa9.39□□□□□ -0.91
CNOT1-220ENST00000569916 LINC00476Q8WZB0 136 aa9.39□□□□□ -0.91
CNOT1-220ENST00000569916 PFDN5Q99471 154 aa9.39□□□□□ -0.91
CNOT1-220ENST00000569916 RNF126Q9BV68 326 aa9.39□□□□□ -0.91
CNOT1-220ENST00000569916 NPCDR1Q9BY65 106 aa9.39□□□□□ -0.91
CNOT1-220ENST00000569916 ZNF331Q9NQX6 463 aaPredicted RBP9.39□□□□□ -0.91
CNOT1-220ENST00000569916 KLK5Q9Y337 293 aaPredicted RBP9.39□□□□□ -0.91
CNOT1-220ENST00000569916 TRAV5A0A0B4J249 113 aa9.38□□□□□ -0.91
CNOT1-220ENST00000569916 SLC17A3O00476 420 aa9.38□□□□□ -0.91
CNOT1-220ENST00000569916 MPC2O95563 127 aa9.38□□□□□ -0.91
CNOT1-220ENST00000569916 CLINT1Q14677 625 aa9.38□□□□□ -0.91
CNOT1-220ENST00000569916 C1orf158Q8N1D5 194 aa9.38□□□□□ -0.91
CNOT1-220ENST00000569916 OR11H7Q8NGC8 314 aa9.38□□□□□ -0.91
CNOT1-220ENST00000569916 OR8A1Q8NGG7 326 aa9.38□□□□□ -0.91
CNOT1-220ENST00000569916 THAP6Q8TBB0 222 aa9.38□□□□□ -0.91
CNOT1-220ENST00000569916 LRRC20Q8TCA0 184 aa9.38□□□□□ -0.91
CNOT1-220ENST00000569916 SLC50A1Q9BRV3 221 aa9.38□□□□□ -0.91
CNOT1-220ENST00000569916 CELA1Q9UNI1 258 aa9.38□□□□□ -0.91
CNOT1-220ENST00000569916 ALG5Q9Y673 324 aa9.38□□□□□ -0.91
CNOT1-220ENST00000569916 IGHV3OR16-12A0A075B7B8 117 aa9.37□□□□□ -0.91
CNOT1-220ENST00000569916 SMIM9A6NGZ8 99 aa9.37□□□□□ -0.91
CNOT1-220ENST00000569916 H3BQ15 152 aa9.37□□□□□ -0.91
CNOT1-220ENST00000569916 H3BTX0 84 aa9.37□□□□□ -0.91
CNOT1-220ENST00000569916 PET100P0DJ07 73 aa9.37□□□□□ -0.91
CNOT1-220ENST00000569916 PRB4P10163 310 aaPredicted RBP9.37□□□□□ -0.91
CNOT1-220ENST00000569916 SPINK13Q1W4C9 94 aa9.37□□□□□ -0.91
CNOT1-220ENST00000569916 GOLT1BQ9Y3E0 138 aa9.37□□□□□ -0.91
CNOT1-220ENST00000569916 M0R2Z0 102 aa9.36□□□□□ -0.91
CNOT1-220ENST00000569916 CRXO43186 299 aaPredicted RBP9.36□□□□□ -0.91
CNOT1-220ENST00000569916 AMBPP02760 352 aa9.36□□□□□ -0.91
CNOT1-220ENST00000569916 HIST1H1AQ02539 215 aaPredicted RBP9.36□□□□□ -0.91
CNOT1-220ENST00000569916 GCSAMLQ5JQS6 135 aa9.36□□□□□ -0.91
CNOT1-220ENST00000569916 Q6ZTC4 211 aa9.36□□□□□ -0.91
CNOT1-220ENST00000569916 RPUSD4Q96CM3 377 aaKnown RBP9.36□□□□□ -0.91
CNOT1-220ENST00000569916 SAT2Q96F10 170 aaPredicted RBP9.36□□□□□ -0.91
CNOT1-220ENST00000569916 IGF2BP2-AS1Q96M15 143 aa9.36□□□□□ -0.91
CNOT1-220ENST00000569916 WDR61Q9GZS3 305 aaKnown RBP9.36□□□□□ -0.91
CNOT1-220ENST00000569916 MBD2Q9UBB5 411 aa9.36□□□□□ -0.91
CNOT1-220ENST00000569916 HSPB11Q9Y547 144 aa9.36□□□□□ -0.91
CNOT1-220ENST00000569916 C11orf94C9JXX5 98 aa9.35□□□□□ -0.91
CNOT1-220ENST00000569916 BOLA2-SMG1P6H3BVE0 249 aa9.35□□□□□ -0.91
CNOT1-220ENST00000569916 C12orf74Q32Q52 190 aa9.35□□□□□ -0.91
CNOT1-220ENST00000569916 BAP18Q8IXM2 172 aa9.35□□□□□ -0.91
CNOT1-220ENST00000569916 ATP5SQ99766 215 aa9.35□□□□□ -0.91
CNOT1-220ENST00000569916 ZNF586Q9NXT0 402 aa9.35□□□□□ -0.91
CNOT1-220ENST00000569916 TMEM14CQ9P0S9 112 aa9.35□□□□□ -0.91
CNOT1-220ENST00000569916 RFNGQ9Y644 331 aa9.35□□□□□ -0.91
CNOT1-220ENST00000569916 TMEM189A5PLL7 270 aa9.34□□□□□ -0.91
CNOT1-220ENST00000569916 ZNF253O75346 499 aa9.34□□□□□ -0.91
CNOT1-220ENST00000569916 INSP01308 110 aa9.34□□□□□ -0.91
CNOT1-220ENST00000569916 HBE1P02100 147 aa9.34□□□□□ -0.91
CNOT1-220ENST00000569916 RPL12P30050 165 aaKnown RBP9.34□□□□□ -0.91
CNOT1-220ENST00000569916 GUK1Q16774 197 aa9.34□□□□□ -0.91
CNOT1-220ENST00000569916 ZNF767PQ75MW2 155 aa9.34□□□□□ -0.91
CNOT1-220ENST00000569916 C2CD4CQ8TF44 421 aa9.34□□□□□ -0.91
CNOT1-220ENST00000569916 KCNIP2Q9NS61 270 aa9.34□□□□□ -0.91
CNOT1-220ENST00000569916 TRBV19A0A075B6N1 114 aa9.33□□□□□ -0.92
CNOT1-220ENST00000569916 TRAV12-2A0A075B6T6 113 aa9.33□□□□□ -0.92
CNOT1-220ENST00000569916 TRAV10A0A0B4J240 114 aa9.33□□□□□ -0.92
CNOT1-220ENST00000569916 LOC102723971A0A1B0GUV8 181 aa9.33□□□□□ -0.92
CNOT1-220ENST00000569916 PRAC2D3DTV9 90 aa9.33□□□□□ -0.92
CNOT1-220ENST00000569916 LY6G6CO95867 125 aa9.33□□□□□ -0.92
CNOT1-220ENST00000569916 PYYP10082 97 aa9.33□□□□□ -0.92
CNOT1-220ENST00000569916 RHOBP62745 196 aa9.33□□□□□ -0.92
CNOT1-220ENST00000569916 FCN2Q15485 313 aa9.33□□□□□ -0.92
CNOT1-220ENST00000569916 SLC25A2Q9BXI2 301 aa9.33□□□□□ -0.92
CNOT1-220ENST00000569916 SMIM3Q9BZL3 60 aa9.33□□□□□ -0.92
CNOT1-220ENST00000569916 C17orf112F2Z3M2 114 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms