RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 PRM2P04554 102 aa11.11□□□□□ -0.63
CDH3-204ENST00000565453 ZNF846Q147U1 533 aa11.11□□□□□ -0.63
CDH3-204ENST00000565453 LINC00305Q7Z4B0 112 aa11.11□□□□□ -0.63
CDH3-204ENST00000565453 BAP18Q8IXM2 172 aa11.11□□□□□ -0.63
CDH3-204ENST00000565453 TMEM37Q8WXS4 190 aa11.11□□□□□ -0.63
CDH3-204ENST00000565453 RNF24Q9Y225 148 aa11.11□□□□□ -0.63
CDH3-204ENST00000565453 LSM5Q9Y4Y9 91 aaKnown RBP11.11□□□□□ -0.63
CDH3-204ENST00000565453 HECTD4Q9Y4D8 3996 aa11.1□□□□□ -0.63
CDH3-204ENST00000565453 ZNF705GA8MUZ8 300 aaPredicted RBP11.1□□□□□ -0.63
CDH3-204ENST00000565453 FAM25EA8MYX2 175 aa11.1□□□□□ -0.63
CDH3-204ENST00000565453 L7N2F9 121 aa11.1□□□□□ -0.63
CDH3-204ENST00000565453 PRB4P10163 310 aaPredicted RBP11.1□□□□□ -0.63
CDH3-204ENST00000565453 CXCL2P19875 107 aa11.1□□□□□ -0.63
CDH3-204ENST00000565453 VAMP2P63027 116 aa11.1□□□□□ -0.63
CDH3-204ENST00000565453 HIST1H1AQ02539 215 aaPredicted RBP11.1□□□□□ -0.63
CDH3-204ENST00000565453 IL15RAQ13261 267 aa11.1□□□□□ -0.63
CDH3-204ENST00000565453 MORN5Q5VZ52 161 aa11.1□□□□□ -0.63
CDH3-204ENST00000565453 C12orf45Q8N5I9 185 aaPredicted RBP11.1□□□□□ -0.63
CDH3-204ENST00000565453 C2orf50Q96LR7 162 aa11.1□□□□□ -0.63
CDH3-204ENST00000565453 TMEM208Q9BTX3 173 aa11.1□□□□□ -0.63
CDH3-204ENST00000565453 ZNF331Q9NQX6 463 aaPredicted RBP11.1□□□□□ -0.63
CDH3-204ENST00000565453 TRAV12-2A0A075B6T6 113 aa11.09□□□□□ -0.63
CDH3-204ENST00000565453 PLAC8L1A1L4L8 177 aa11.09□□□□□ -0.63
CDH3-204ENST00000565453 C5orf51A6NDU8 294 aa11.09□□□□□ -0.63
CDH3-204ENST00000565453 FAM24AA6NFZ4 105 aa11.09□□□□□ -0.63
CDH3-204ENST00000565453 H2AFB2P0C5Z0 115 aa11.09□□□□□ -0.63
CDH3-204ENST00000565453 TSPOP30536 169 aa11.09□□□□□ -0.63
CDH3-204ENST00000565453 B2MP61769 119 aa11.09□□□□□ -0.63
CDH3-204ENST00000565453 VWC2Q2TAL6 325 aa11.09□□□□□ -0.63
CDH3-204ENST00000565453 LCN15Q6UWW0 184 aa11.09□□□□□ -0.63
CDH3-204ENST00000565453 LRRC20Q8TCA0 184 aa11.09□□□□□ -0.63
CDH3-204ENST00000565453 COX7A2P2O60397 106 aa11.08□□□□□ -0.64
CDH3-204ENST00000565453 CST7O76096 145 aa11.08□□□□□ -0.64
CDH3-204ENST00000565453 SNRPCP09234 159 aaKnown RBP11.08□□□□□ -0.64
CDH3-204ENST00000565453 AZU1P20160 251 aa11.08□□□□□ -0.64
CDH3-204ENST00000565453 CAMLGP49069 296 aa11.08□□□□□ -0.64
CDH3-204ENST00000565453 BCAP31P51572 246 aa11.08□□□□□ -0.64
CDH3-204ENST00000565453 CAV2P51636 162 aa11.08□□□□□ -0.64
CDH3-204ENST00000565453 DAD1P61803 113 aa11.08□□□□□ -0.64
CDH3-204ENST00000565453 OPCMLQ14982 345 aa11.08□□□□□ -0.64
CDH3-204ENST00000565453 LINC00299Q6ZSB3 139 aa11.08□□□□□ -0.64
CDH3-204ENST00000565453 BPIFA4PQ86YQ2 179 aa11.08□□□□□ -0.64
CDH3-204ENST00000565453 RPUSD4Q96CM3 377 aaKnown RBP11.08□□□□□ -0.64
CDH3-204ENST00000565453 SLC50A1Q9BRV3 221 aa11.08□□□□□ -0.64
CDH3-204ENST00000565453 WDR83OSQ9Y284 106 aa11.08□□□□□ -0.64
CDH3-204ENST00000565453 LYRM9A8MSI8 78 aa11.07□□□□□ -0.64
CDH3-204ENST00000565453 SLC17A3O00476 420 aa11.07□□□□□ -0.64
CDH3-204ENST00000565453 IGLC2P0DOY2 106 aa11.07□□□□□ -0.64
CDH3-204ENST00000565453 HTN3P15516 51 aa11.07□□□□□ -0.64
CDH3-204ENST00000565453 RHOBP62745 196 aa11.07□□□□□ -0.64
CDH3-204ENST00000565453 C10orf113Q5VZT2 155 aa11.07□□□□□ -0.64
CDH3-204ENST00000565453 MIC13Q5XKP0 118 aa11.07□□□□□ -0.64
CDH3-204ENST00000565453 NRARPQ7Z6K4 114 aa11.07□□□□□ -0.64
CDH3-204ENST00000565453 SAT2Q96F10 170 aaPredicted RBP11.07□□□□□ -0.64
CDH3-204ENST00000565453 FAM240BA0A1B0GVZ2 78 aa11.06□□□□□ -0.64
CDH3-204ENST00000565453 IGSF23A1L1A6 192 aa11.06□□□□□ -0.64
CDH3-204ENST00000565453 PRAC2D3DTV9 90 aa11.06□□□□□ -0.64
CDH3-204ENST00000565453 H3BQ15 152 aa11.06□□□□□ -0.64
CDH3-204ENST00000565453 RAB32Q13637 225 aa11.06□□□□□ -0.64
CDH3-204ENST00000565453 TMEM88Q6PEY1 159 aa11.06□□□□□ -0.64
CDH3-204ENST00000565453 TMEM256Q8N2U0 113 aa11.06□□□□□ -0.64
CDH3-204ENST00000565453 DNAJC4Q9NNZ3 241 aa11.06□□□□□ -0.64
CDH3-204ENST00000565453 LYRM2Q9NU23 88 aaPredicted RBP11.06□□□□□ -0.64
CDH3-204ENST00000565453 UQCC1Q9NVA1 299 aa11.06□□□□□ -0.64
CDH3-204ENST00000565453 TRAV5A0A0B4J249 113 aa11.05□□□□□ -0.64
CDH3-204ENST00000565453 H3BTX0 84 aa11.05□□□□□ -0.64
CDH3-204ENST00000565453 PVALBP20472 110 aaPredicted RBP11.05□□□□□ -0.64
CDH3-204ENST00000565453 CDKN1BP46527 198 aa11.05□□□□□ -0.64
CDH3-204ENST00000565453 SULT1A1P50225 295 aa11.05□□□□□ -0.64
CDH3-204ENST00000565453 TAS2R60P59551 318 aa11.05□□□□□ -0.64
CDH3-204ENST00000565453 S100A10P60903 97 aa11.05□□□□□ -0.64
CDH3-204ENST00000565453 ASAH1Q13510 395 aa11.05□□□□□ -0.64
CDH3-204ENST00000565453 RAB31Q13636 194 aa11.05□□□□□ -0.64
CDH3-204ENST00000565453 LGALS9BQ3B8N2 356 aa11.05□□□□□ -0.64
CDH3-204ENST00000565453 LINC00336Q6ZUF6 198 aa11.05□□□□□ -0.64
CDH3-204ENST00000565453 TMEM252Q8N6L7 170 aa11.05□□□□□ -0.64
CDH3-204ENST00000565453 DNAH17Q9UFH2 4485 aa11.04□□□□□ -0.64
CDH3-204ENST00000565453 FAT2Q9NYQ8 4349 aa11.04□□□□□ -0.64
CDH3-204ENST00000565453 A0A1B0GVY2 172 aa11.04□□□□□ -0.64
CDH3-204ENST00000565453 RTL8CO15255 209 aa11.04□□□□□ -0.64
CDH3-204ENST00000565453 S100A11P31949 105 aa11.04□□□□□ -0.64
CDH3-204ENST00000565453 RPL29P47914 159 aaKnown RBP11.04□□□□□ -0.64
CDH3-204ENST00000565453 KIR3DS1Q14943 382 aa11.04□□□□□ -0.64
CDH3-204ENST00000565453 FCN2Q15485 313 aa11.04□□□□□ -0.64
CDH3-204ENST00000565453 RNF212Q495C1 297 aa11.04□□□□□ -0.64
CDH3-204ENST00000565453 Q6ZRG5 221 aa11.04□□□□□ -0.64
CDH3-204ENST00000565453 OR1L4Q8NGR5 311 aa11.04□□□□□ -0.64
CDH3-204ENST00000565453 CHAC2Q8WUX2 184 aa11.04□□□□□ -0.64
CDH3-204ENST00000565453 LINC01587Q99440 93 aa11.04□□□□□ -0.64
CDH3-204ENST00000565453 PPP1R14DQ9NXH3 145 aa11.04□□□□□ -0.64
CDH3-204ENST00000565453 PXMP4Q9Y6I8 212 aa11.04□□□□□ -0.64
CDH3-204ENST00000565453 DNAH2Q9P225 4427 aa11.03□□□□□ -0.64
CDH3-204ENST00000565453 UBE2L5PA0A1B0GUS4 154 aa11.03□□□□□ -0.64
CDH3-204ENST00000565453 M0R2N4 97 aa11.03□□□□□ -0.64
CDH3-204ENST00000565453 MZT2BQ6NZ67 158 aa11.03□□□□□ -0.64
CDH3-204ENST00000565453 Q6ZR54 194 aa11.03□□□□□ -0.64
CDH3-204ENST00000565453 UBE2DNLQ8IWF7 75 aa11.03□□□□□ -0.64
CDH3-204ENST00000565453 S100ZQ8WXG8 99 aa11.03□□□□□ -0.64
CDH3-204ENST00000565453 PARD6GQ9BYG4 376 aaPredicted RBP11.03□□□□□ -0.64
CDH3-204ENST00000565453 SLC39A9Q9NUM3 307 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms