RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 B2MP61769 119 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 NUTF2P61970 127 aaKnown RBP9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 RBMY1FQ15415 496 aaKnown RBP9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 TMEM41BQ5BJD5 291 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 LINC00305Q7Z4B0 112 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 Q8NAQ8 132 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 OR2T35Q8NGX2 323 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 LINC00476Q8WZB0 136 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 AQP10Q96PS8 301 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 DNAJC4Q9NNZ3 241 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 RNF24Q9Y225 148 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 HLA-DRB4X5D2U9 266 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 X6R8D5 127 aa9.89□□□□□ -0.83
VPS9D1-204ENST00000565023 G3V3Q6 166 aa9.88□□□□□ -0.83
VPS9D1-204ENST00000565023 RPL7P18124 248 aaKnown RBP9.88□□□□□ -0.83
VPS9D1-204ENST00000565023 ATF4P18848 351 aaPredicted RBP9.88□□□□□ -0.83
VPS9D1-204ENST00000565023 C10orf113Q5VZT2 155 aa9.88□□□□□ -0.83
VPS9D1-204ENST00000565023 IGFL4Q6B9Z1 124 aa9.88□□□□□ -0.83
VPS9D1-204ENST00000565023 OR1L4Q8NGR5 311 aa9.88□□□□□ -0.83
VPS9D1-204ENST00000565023 C20orf173Q96LM9 149 aa9.88□□□□□ -0.83
VPS9D1-204ENST00000565023 PFDN5Q99471 154 aa9.88□□□□□ -0.83
VPS9D1-204ENST00000565023 SMIM3Q9BZL3 60 aa9.88□□□□□ -0.83
VPS9D1-204ENST00000565023 MFFQ9GZY8 342 aa9.88□□□□□ -0.83
VPS9D1-204ENST00000565023 SAV1Q9H4B6 383 aaPredicted RBP9.88□□□□□ -0.83
VPS9D1-204ENST00000565023 PLECQ15149 4684 aaKnown RBP9.88□□□□□ -0.83
VPS9D1-204ENST00000565023 MRPS12O15235 138 aaKnown RBP9.87□□□□□ -0.83
VPS9D1-204ENST00000565023 PRB4P10163 310 aaPredicted RBP9.87□□□□□ -0.83
VPS9D1-204ENST00000565023 MIFP14174 115 aa9.87□□□□□ -0.83
VPS9D1-204ENST00000565023 MEOX2P50222 304 aa9.87□□□□□ -0.83
VPS9D1-204ENST00000565023 SAMD13Q5VXD3 122 aa9.87□□□□□ -0.83
VPS9D1-204ENST00000565023 EBLN2Q6P2I7 272 aa9.87□□□□□ -0.83
VPS9D1-204ENST00000565023 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.87□□□□□ -0.83
VPS9D1-204ENST00000565023 FOXI2Q6ZQN5 318 aa9.87□□□□□ -0.83
VPS9D1-204ENST00000565023 CSNK1G2-AS1Q8NCQ2 148 aa9.87□□□□□ -0.83
VPS9D1-204ENST00000565023 C1QTNF4Q9BXJ3 329 aa9.87□□□□□ -0.83
VPS9D1-204ENST00000565023 PARD6GQ9BYG4 376 aaPredicted RBP9.87□□□□□ -0.83
VPS9D1-204ENST00000565023 SLC35B3Q9H1N7 401 aa9.87□□□□□ -0.83
VPS9D1-204ENST00000565023 WFDC1Q9HC57 220 aa9.87□□□□□ -0.83
VPS9D1-204ENST00000565023 FRAS1Q86XX4 4008 aa9.86□□□□□ -0.83
VPS9D1-204ENST00000565023 ZNF705EA8MWA4 302 aaPredicted RBP9.86□□□□□ -0.83
VPS9D1-204ENST00000565023 ISLRO14498 428 aa9.86□□□□□ -0.83
VPS9D1-204ENST00000565023 IFNA5P01569 189 aa9.86□□□□□ -0.83
VPS9D1-204ENST00000565023 HLA-DMBP28068 263 aa9.86□□□□□ -0.83
VPS9D1-204ENST00000565023 FAM78BQ5VT40 261 aa9.86□□□□□ -0.83
VPS9D1-204ENST00000565023 MORN5Q5VZ52 161 aa9.86□□□□□ -0.83
VPS9D1-204ENST00000565023 ZNF767PQ75MW2 155 aa9.86□□□□□ -0.83
VPS9D1-204ENST00000565023 ZNF709Q8N972 641 aa9.86□□□□□ -0.83
VPS9D1-204ENST00000565023 KCNIP2Q9NS61 270 aa9.86□□□□□ -0.83
VPS9D1-204ENST00000565023 RPRMQ9NS64 109 aa9.86□□□□□ -0.83
VPS9D1-204ENST00000565023 TNFSF18Q9UNG2 199 aa9.86□□□□□ -0.83
VPS9D1-204ENST00000565023 A0A087X0K7 114 aa9.85□□□□□ -0.83
VPS9D1-204ENST00000565023 RNF222A6NCQ9 220 aa9.85□□□□□ -0.83
VPS9D1-204ENST00000565023 C17orf112F2Z3M2 114 aa9.85□□□□□ -0.83
VPS9D1-204ENST00000565023 SNRPCP09234 159 aaKnown RBP9.85□□□□□ -0.83
VPS9D1-204ENST00000565023 EMP1P54849 157 aa9.85□□□□□ -0.83
VPS9D1-204ENST00000565023 BPIFA4PQ86YQ2 179 aa9.85□□□□□ -0.83
VPS9D1-204ENST00000565023 RNF182Q8N6D2 247 aa9.85□□□□□ -0.83
VPS9D1-204ENST00000565023 INO80EQ8NBZ0 244 aaPredicted RBP9.85□□□□□ -0.83
VPS9D1-204ENST00000565023 SCGB1C1Q8TD33 95 aa9.85□□□□□ -0.83
VPS9D1-204ENST00000565023 CELA1Q9UNI1 258 aa9.85□□□□□ -0.83
VPS9D1-204ENST00000565023 FXYD6-FXYD2A0A087WZ82 144 aa9.84□□□□□ -0.83
VPS9D1-204ENST00000565023 A0A0J9YX75 114 aa9.84□□□□□ -0.83
VPS9D1-204ENST00000565023 ZNF705DP0CH99 300 aaPredicted RBP9.84□□□□□ -0.83
VPS9D1-204ENST00000565023 ZNF705BP0CI00 300 aaPredicted RBP9.84□□□□□ -0.83
VPS9D1-204ENST00000565023 GCSAMLQ5JQS6 135 aa9.84□□□□□ -0.83
VPS9D1-204ENST00000565023 Q6ZNX1 250 aa9.84□□□□□ -0.83
VPS9D1-204ENST00000565023 Q6ZTC4 211 aa9.84□□□□□ -0.83
VPS9D1-204ENST00000565023 LRRC20Q8TCA0 184 aa9.84□□□□□ -0.83
VPS9D1-204ENST00000565023 TRAV8-2A0A0B4J237 113 aa9.83□□□□□ -0.84
VPS9D1-204ENST00000565023 TRAV5A0A0B4J249 113 aa9.83□□□□□ -0.84
VPS9D1-204ENST00000565023 IGLL5B9A064 214 aa9.83□□□□□ -0.84
VPS9D1-204ENST00000565023 IGLC2P0DOY2 106 aa9.83□□□□□ -0.84
VPS9D1-204ENST00000565023 PSG9Q00887 426 aa9.83□□□□□ -0.84
VPS9D1-204ENST00000565023 ZNF266Q14584 549 aa9.83□□□□□ -0.84
VPS9D1-204ENST00000565023 ZNF738Q8NE65 137 aa9.83□□□□□ -0.84
VPS9D1-204ENST00000565023 C2CD4CQ8TF44 421 aa9.83□□□□□ -0.84
VPS9D1-204ENST00000565023 SMLR1H3BR10 107 aa9.82□□□□□ -0.84
VPS9D1-204ENST00000565023 H3BTX0 84 aa9.82□□□□□ -0.84
VPS9D1-204ENST00000565023 CXCL2P19875 107 aa9.82□□□□□ -0.84
VPS9D1-204ENST00000565023 HRH4Q9H3N8 390 aa9.82□□□□□ -0.84
VPS9D1-204ENST00000565023 TIMM9Q9Y5J7 89 aa9.82□□□□□ -0.84
VPS9D1-204ENST00000565023 H3BQ15 152 aa9.81□□□□□ -0.84
VPS9D1-204ENST00000565023 FFAR4Q5NUL3 377 aa9.81□□□□□ -0.84
VPS9D1-204ENST00000565023 SPATA31B1PQ5VZV4 182 aa9.81□□□□□ -0.84
VPS9D1-204ENST00000565023 LCN15Q6UWW0 184 aa9.81□□□□□ -0.84
VPS9D1-204ENST00000565023 MRPL32Q9BYC8 188 aaKnown RBP9.81□□□□□ -0.84
VPS9D1-204ENST00000565023 TMEM14CQ9P0S9 112 aa9.81□□□□□ -0.84
VPS9D1-204ENST00000565023 GOLT1BQ9Y3E0 138 aa9.81□□□□□ -0.84
VPS9D1-204ENST00000565023 RFNGQ9Y644 331 aa9.81□□□□□ -0.84
VPS9D1-204ENST00000565023 TRAV10A0A0B4J240 114 aa9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 C11orf94C9JXX5 98 aa9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 ARPC5O15511 151 aa9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 CNN1P51911 297 aaKnown RBP9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 RHOBP62745 196 aa9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 HIST1H1AQ02539 215 aaPredicted RBP9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 GUK1Q16774 197 aa9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 SPINK13Q1W4C9 94 aa9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 C12orf74Q32Q52 190 aa9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 ZNF705AQ6ZN79 300 aaPredicted RBP9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 MIR17HGQ75NE6 70 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms