RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 RNF126Q9BV68 326 aa12.3□□□□□ -0.44
CDC42BPB-208ENST00000561271 UBE2L5PA0A1B0GUS4 154 aa12.29□□□□□ -0.44
CDC42BPB-208ENST00000561271 DUSP14O95147 198 aaKnown RBP12.29□□□□□ -0.44
CDC42BPB-208ENST00000561271 SPART-AS1P0CW21 52 aa12.29□□□□□ -0.44
CDC42BPB-208ENST00000561271 HIST1H1AQ02539 215 aaPredicted RBP12.29□□□□□ -0.44
CDC42BPB-208ENST00000561271 PXDC1Q5TGL8 231 aa12.29□□□□□ -0.44
CDC42BPB-208ENST00000561271 FAM222AQ5U5X8 452 aa12.29□□□□□ -0.44
CDC42BPB-208ENST00000561271 MORN5Q5VZ52 161 aa12.29□□□□□ -0.44
CDC42BPB-208ENST00000561271 S100A7AQ86SG5 101 aa12.29□□□□□ -0.44
CDC42BPB-208ENST00000561271 BAP18Q8IXM2 172 aa12.29□□□□□ -0.44
CDC42BPB-208ENST00000561271 TMEM208Q9BTX3 173 aa12.29□□□□□ -0.44
CDC42BPB-208ENST00000561271 DKK2Q9UBU2 259 aa12.29□□□□□ -0.44
CDC42BPB-208ENST00000561271 IGSF23A1L1A6 192 aa12.28□□□□□ -0.44
CDC42BPB-208ENST00000561271 CRXO43186 299 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPB-208ENST00000561271 INSP01308 110 aa12.28□□□□□ -0.44
CDC42BPB-208ENST00000561271 PVALBP20472 110 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPB-208ENST00000561271 CAMLGP49069 296 aa12.28□□□□□ -0.44
CDC42BPB-208ENST00000561271 RAB32Q13637 225 aa12.28□□□□□ -0.44
CDC42BPB-208ENST00000561271 RRN3P1Q2M238 152 aa12.28□□□□□ -0.44
CDC42BPB-208ENST00000561271 MIC13Q5XKP0 118 aa12.28□□□□□ -0.44
CDC42BPB-208ENST00000561271 NRARPQ7Z6K4 114 aa12.28□□□□□ -0.44
CDC42BPB-208ENST00000561271 ENKURQ8TC29 256 aa12.28□□□□□ -0.44
CDC42BPB-208ENST00000561271 LRRC20Q8TCA0 184 aa12.28□□□□□ -0.44
CDC42BPB-208ENST00000561271 TMEM37Q8WXS4 190 aa12.28□□□□□ -0.44
CDC42BPB-208ENST00000561271 LYRM2Q9NU23 88 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPB-208ENST00000561271 YTHDF2Q9Y5A9 579 aaKnown RBP12.28□□□□□ -0.44
CDC42BPB-208ENST00000561271 TRAV12-2A0A075B6T6 113 aa12.27□□□□□ -0.45
CDC42BPB-208ENST00000561271 H3BTX0 84 aa12.27□□□□□ -0.45
CDC42BPB-208ENST00000561271 BOLA2-SMG1P6H3BVE0 249 aa12.27□□□□□ -0.45
CDC42BPB-208ENST00000561271 OPCMLQ14982 345 aa12.27□□□□□ -0.45
CDC42BPB-208ENST00000561271 PSG3Q16557 428 aa12.27□□□□□ -0.45
CDC42BPB-208ENST00000561271 C10orf113Q5VZT2 155 aa12.27□□□□□ -0.45
CDC42BPB-208ENST00000561271 LCN15Q6UWW0 184 aa12.27□□□□□ -0.45
CDC42BPB-208ENST00000561271 OR8A1Q8NGG7 326 aa12.27□□□□□ -0.45
CDC42BPB-208ENST00000561271 UQCC1Q9NVA1 299 aa12.27□□□□□ -0.45
CDC42BPB-208ENST00000561271 PLA2G2EQ9NZK7 142 aa12.27□□□□□ -0.45
CDC42BPB-208ENST00000561271 WDR83OSQ9Y284 106 aa12.27□□□□□ -0.45
CDC42BPB-208ENST00000561271 SLC17A3O00476 420 aa12.26□□□□□ -0.45
CDC42BPB-208ENST00000561271 UPK1BO75841 260 aa12.26□□□□□ -0.45
CDC42BPB-208ENST00000561271 PRM2P04554 102 aa12.26□□□□□ -0.45
CDC42BPB-208ENST00000561271 SULT1A1P50225 295 aa12.26□□□□□ -0.45
CDC42BPB-208ENST00000561271 IL15RAQ13261 267 aa12.26□□□□□ -0.45
CDC42BPB-208ENST00000561271 STX12Q86Y82 276 aa12.26□□□□□ -0.45
CDC42BPB-208ENST00000561271 NIPSNAP3BQ9BS92 247 aa12.26□□□□□ -0.45
CDC42BPB-208ENST00000561271 RNF24Q9Y225 148 aa12.26□□□□□ -0.45
CDC42BPB-208ENST00000561271 TEX48A0A1B0GUV7 120 aa12.25□□□□□ -0.45
CDC42BPB-208ENST00000561271 ZNF705GA8MUZ8 300 aaPredicted RBP12.25□□□□□ -0.45
CDC42BPB-208ENST00000561271 HTN3P15516 51 aa12.25□□□□□ -0.45
CDC42BPB-208ENST00000561271 CXCL2P19875 107 aa12.25□□□□□ -0.45
CDC42BPB-208ENST00000561271 RHOBP62745 196 aa12.25□□□□□ -0.45
CDC42BPB-208ENST00000561271 BAXQ07812 192 aa12.25□□□□□ -0.45
CDC42BPB-208ENST00000561271 RAB31Q13636 194 aa12.25□□□□□ -0.45
CDC42BPB-208ENST00000561271 VWC2Q2TAL6 325 aa12.25□□□□□ -0.45
CDC42BPB-208ENST00000561271 BPIFA4PQ86YQ2 179 aa12.25□□□□□ -0.45
CDC42BPB-208ENST00000561271 TMEM252Q8N6L7 170 aa12.25□□□□□ -0.45
CDC42BPB-208ENST00000561271 RPUSD4Q96CM3 377 aaKnown RBP12.25□□□□□ -0.45
CDC42BPB-208ENST00000561271 SLC50A1Q9BRV3 221 aa12.25□□□□□ -0.45
CDC42BPB-208ENST00000561271 NDUFAF3Q9BU61 184 aa12.25□□□□□ -0.45
CDC42BPB-208ENST00000561271 ZNF331Q9NQX6 463 aaPredicted RBP12.25□□□□□ -0.45
CDC42BPB-208ENST00000561271 A6NHS1 94 aa12.24□□□□□ -0.45
CDC42BPB-208ENST00000561271 SIX6O95475 246 aa12.24□□□□□ -0.45
CDC42BPB-208ENST00000561271 IFITM3Q01628 133 aa12.24□□□□□ -0.45
CDC42BPB-208ENST00000561271 GPN1Q9HCN4 374 aaPredicted RBP12.24□□□□□ -0.45
CDC42BPB-208ENST00000561271 PTTG2Q9NZH5 202 aa12.24□□□□□ -0.45
CDC42BPB-208ENST00000561271 TRAV5A0A0B4J249 113 aa12.23□□□□□ -0.45
CDC42BPB-208ENST00000561271 IGLC2P0DOY2 106 aa12.23□□□□□ -0.45
CDC42BPB-208ENST00000561271 FGF7P21781 194 aa12.23□□□□□ -0.45
CDC42BPB-208ENST00000561271 HBG1P69891 147 aa12.23□□□□□ -0.45
CDC42BPB-208ENST00000561271 HBG2P69892 147 aa12.23□□□□□ -0.45
CDC42BPB-208ENST00000561271 Q6ZRG5 221 aa12.23□□□□□ -0.45
CDC42BPB-208ENST00000561271 DNAJC4Q9NNZ3 241 aa12.23□□□□□ -0.45
CDC42BPB-208ENST00000561271 PPP1R14DQ9NXH3 145 aa12.23□□□□□ -0.45
CDC42BPB-208ENST00000561271 H3BQ15 152 aa12.22□□□□□ -0.45
CDC42BPB-208ENST00000561271 S100A11P31949 105 aa12.22□□□□□ -0.45
CDC42BPB-208ENST00000561271 B2MP61769 119 aa12.22□□□□□ -0.45
CDC42BPB-208ENST00000561271 DAD1P61803 113 aa12.22□□□□□ -0.45
CDC42BPB-208ENST00000561271 OR1L4Q8NGR5 311 aa12.22□□□□□ -0.45
CDC42BPB-208ENST00000561271 PFDN5Q99471 154 aa12.22□□□□□ -0.45
CDC42BPB-208ENST00000561271 PARD6GQ9BYG4 376 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPB-208ENST00000561271 SLC39A9Q9NUM3 307 aa12.22□□□□□ -0.45
CDC42BPB-208ENST00000561271 PXMP4Q9Y6I8 212 aa12.22□□□□□ -0.45
CDC42BPB-208ENST00000561271 PRAC2D3DTV9 90 aa12.21□□□□□ -0.45
CDC42BPB-208ENST00000561271 RPL29P47914 159 aaKnown RBP12.21□□□□□ -0.45
CDC42BPB-208ENST00000561271 OXA1LQ15070 435 aa12.21□□□□□ -0.45
CDC42BPB-208ENST00000561271 LRRC37A5PQ49AS3 106 aa12.21□□□□□ -0.45
CDC42BPB-208ENST00000561271 P0DMU3 169 aa12.2□□□□□ -0.46
CDC42BPB-208ENST00000561271 FAM231AP0DMU4 169 aa12.2□□□□□ -0.46
CDC42BPB-208ENST00000561271 FAM231CP0DMU5 169 aa12.2□□□□□ -0.46
CDC42BPB-208ENST00000561271 AZU1P20160 251 aa12.2□□□□□ -0.46
CDC42BPB-208ENST00000561271 OR5AC2Q9NZP5 309 aa12.2□□□□□ -0.46
CDC42BPB-208ENST00000561271 PLAC8L1A1L4L8 177 aa12.19□□□□□ -0.46
CDC42BPB-208ENST00000561271 INMT-MINDY4F8WBC2 141 aa12.19□□□□□ -0.46
CDC42BPB-208ENST00000561271 CDKN1BP46527 198 aa12.19□□□□□ -0.46
CDC42BPB-208ENST00000561271 KIR3DS1Q14943 382 aa12.19□□□□□ -0.46
CDC42BPB-208ENST00000561271 TMEM256Q8N2U0 113 aa12.19□□□□□ -0.46
CDC42BPB-208ENST00000561271 THAP6Q8TBB0 222 aa12.19□□□□□ -0.46
CDC42BPB-208ENST00000561271 SAT2Q96F10 170 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPB-208ENST00000561271 LINC01587Q99440 93 aa12.19□□□□□ -0.46
CDC42BPB-208ENST00000561271 NPCDR1Q9BY65 106 aa12.19□□□□□ -0.46
CDC42BPB-208ENST00000561271 ZNF586Q9NXT0 402 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms