RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 CYYR1Q96J86 154 aa8.57□□□□□ -1.04
CARMIL3-202ENST00000559694 C7orf71A4D174 169 aa8.57□□□□□ -1.04
CARMIL3-202ENST00000559694 SNRPD3P62318 126 aaKnown RBP8.57□□□□□ -1.04
CARMIL3-202ENST00000559694 Q6ZWC4 215 aa8.57□□□□□ -1.04
CARMIL3-202ENST00000559694 IGFBPL1Q8WX77 278 aa8.57□□□□□ -1.04
CARMIL3-202ENST00000559694 GGTLC1Q9BX51 225 aa8.57□□□□□ -1.04
CARMIL3-202ENST00000559694 A0A1B0GV72 72 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 APOHP02749 345 aaPredicted RBP8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 ZNF562Q6V9R5 426 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 TCF24Q7RTU0 167 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 KIR3DL3Q8N743 410 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 C3orf56Q8N813 242 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 MYOZ3Q8TDC0 251 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 TRIOO75962 3097 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 TYMSP04818 313 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 GAGE1Q13065 139 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 TWIST1Q15672 202 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 TMEM136Q6ZRR5 245 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 LINC00311Q8N616 119 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 SEPSECSQ9HD40 501 aaKnown RBP8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 H3BVH4 76 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 SMIM13P0DJ93 91 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 PRR31Q5SQ13 230 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 SPATA31B1PQ5VZV4 182 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 C1orf122Q6ZSJ8 110 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 GOLT1AQ6ZVE7 132 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 OR5AN1Q8NGI8 311 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 BBC3Q96PG8 261 aaPredicted RBP8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 COX11Q9Y6N1 276 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 TMEM189A5PLL7 270 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 PAX8Q06710 450 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 DEFB112Q30KQ8 113 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 PIP4P2Q8N4L2 257 aa8.56□□□□□ -1.04
CARMIL3-202ENST00000559694 LOC107984156A0A0G2JMH3 177 aa8.55□□□□□ -1.04
CARMIL3-202ENST00000559694 HIST1H1AQ02539 215 aaPredicted RBP8.55□□□□□ -1.04
CARMIL3-202ENST00000559694 ARL17AQ8IVW1 177 aa8.55□□□□□ -1.04
CARMIL3-202ENST00000559694 RNF125Q96EQ8 232 aa8.55□□□□□ -1.04
CARMIL3-202ENST00000559694 ZNF414Q96IQ9 312 aa8.55□□□□□ -1.04
CARMIL3-202ENST00000559694 ST20Q9HBF5 79 aa8.55□□□□□ -1.04
CARMIL3-202ENST00000559694 MTORP42345 2549 aa8.55□□□□□ -1.04
CARMIL3-202ENST00000559694 G3V318 75 aa8.55□□□□□ -1.04
CARMIL3-202ENST00000559694 SAMD13Q5VXD3 122 aa8.55□□□□□ -1.04
CARMIL3-202ENST00000559694 DDB2Q92466 427 aa8.55□□□□□ -1.04
CARMIL3-202ENST00000559694 PEMTQ9UBM1 199 aa8.55□□□□□ -1.04
CARMIL3-202ENST00000559694 FAM181BA6NEQ2 426 aa8.55□□□□□ -1.04
CARMIL3-202ENST00000559694 PSG1P11464 419 aa8.55□□□□□ -1.04
CARMIL3-202ENST00000559694 MLANAQ16655 118 aa8.55□□□□□ -1.04
CARMIL3-202ENST00000559694 CHD3Q12873 2000 aaKnown RBP8.55□□□□□ -1.04
CARMIL3-202ENST00000559694 ATP6V0E1O15342 81 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 HOXA3O43365 443 aaPredicted RBP8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 IGHV4-38-2P0DP08 117 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 PLA2G2AP14555 144 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 ZFP36P26651 326 aaKnown RBP8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 PSMB2P49721 201 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 LCNL1Q6ZST4 164 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 ZNF833PQ6ZTB9 187 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 NUDT10Q8NFP7 164 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 RPP21Q9H633 154 aaKnown RBP8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 CDH23Q9H251 3354 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 C9JCJ5 164 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 IGHV4-59P01825 116 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 KLHL30-AS1Q8NEE0 82 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 OR2K2Q8NGT1 345 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 C18orf15Q96N68 181 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 HIST1H4GQ99525 98 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 NAA38Q9BRA0 125 aaKnown RBP8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 A0A1W2PRE2 83 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 IGLC2P0DOY2 106 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 IGLC3P0DOY3 106 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 C2orf83Q53S99 150 aa8.54□□□□□ -1.04
CARMIL3-202ENST00000559694 hDV102S1A0JD36 115 aa8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 PSG9Q00887 426 aa8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 GPR82Q96P67 336 aa8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 DYSFO75923 2080 aa8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 A0A1B0GUT8 65 aa8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 A0A1W2PPI3 338 aa8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 GNG5P63218 68 aa8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 Q0VG73 95 aa8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 COA6Q5JTJ3 125 aaKnown RBP8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 RAX2Q96IS3 184 aa8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 PYYP10082 97 aa8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 FAM120AOSQ5T036 256 aa8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 PVRIGQ6DKI7 326 aa8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 STPG4Q8N801 248 aa8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 MGST2Q99735 147 aa8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 GAGE12BA1L429 117 aa8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 TSKUQ8WUA8 353 aa8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 MRPS16Q9Y3D3 137 aaKnown RBP8.53□□□□□ -1.04
CARMIL3-202ENST00000559694 KIAA1549Q9HCM3 1950 aa8.52□□□□□ -1.04
CARMIL3-202ENST00000559694 HOXB4P17483 251 aaPredicted RBP8.52□□□□□ -1.05
CARMIL3-202ENST00000559694 A0A087X0K7 114 aa8.52□□□□□ -1.05
CARMIL3-202ENST00000559694 CENPVL3A0A0U1RRI6 287 aa8.52□□□□□ -1.05
CARMIL3-202ENST00000559694 FOXI3A8MTJ6 420 aaPredicted RBP8.52□□□□□ -1.05
CARMIL3-202ENST00000559694 C5orf30Q96GV9 206 aa8.52□□□□□ -1.05
CARMIL3-202ENST00000559694 TPSG1Q9NRR2 321 aa8.52□□□□□ -1.05
CARMIL3-202ENST00000559694 TNCP24821 2201 aa8.52□□□□□ -1.05
CARMIL3-202ENST00000559694 ADAMTS20P59510 1910 aa8.52□□□□□ -1.05
CARMIL3-202ENST00000559694 MUC21A0A0G2JKD1 596 aa8.52□□□□□ -1.05
CARMIL3-202ENST00000559694 MUC21A0A140T8X8 626 aa8.52□□□□□ -1.05
CARMIL3-202ENST00000559694 RPL13AP40429 203 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms