RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 DKK2Q9UBU2 259 aa8.52□□□□□ -1.05
HERC1-202ENST00000558324 YTHDF2Q9Y5A9 579 aaKnown RBP8.52□□□□□ -1.05
HERC1-202ENST00000558324 TRAV12-2A0A075B6T6 113 aa8.51□□□□□ -1.05
HERC1-202ENST00000558324 A0A087X0K7 114 aa8.51□□□□□ -1.05
HERC1-202ENST00000558324 UBE2L5PA0A1B0GUS4 154 aa8.51□□□□□ -1.05
HERC1-202ENST00000558324 A8MTW9 85 aa8.51□□□□□ -1.05
HERC1-202ENST00000558324 ZNF705GA8MUZ8 300 aaPredicted RBP8.51□□□□□ -1.05
HERC1-202ENST00000558324 INSP01308 110 aa8.51□□□□□ -1.05
HERC1-202ENST00000558324 PRM2P04554 102 aa8.51□□□□□ -1.05
HERC1-202ENST00000558324 CXCL3P19876 107 aa8.51□□□□□ -1.05
HERC1-202ENST00000558324 PVALBP20472 110 aaPredicted RBP8.51□□□□□ -1.05
HERC1-202ENST00000558324 RHOBP62745 196 aa8.51□□□□□ -1.05
HERC1-202ENST00000558324 PXDC1Q5TGL8 231 aa8.51□□□□□ -1.05
HERC1-202ENST00000558324 MORN5Q5VZ52 161 aa8.51□□□□□ -1.05
HERC1-202ENST00000558324 MZT2BQ6NZ67 158 aa8.51□□□□□ -1.05
HERC1-202ENST00000558324 NIPSNAP3BQ9BS92 247 aa8.51□□□□□ -1.05
HERC1-202ENST00000558324 NDUFAF3Q9BU61 184 aa8.51□□□□□ -1.05
HERC1-202ENST00000558324 PPP1R14DQ9NXH3 145 aa8.51□□□□□ -1.05
HERC1-202ENST00000558324 FRAS1Q86XX4 4008 aa8.5□□□□□ -1.05
HERC1-202ENST00000558324 DNAH10Q8IVF4 4471 aa8.5□□□□□ -1.05
HERC1-202ENST00000558324 IGSF23A1L1A6 192 aa8.5□□□□□ -1.05
HERC1-202ENST00000558324 BOLA2-SMG1P6H3BVE0 249 aa8.5□□□□□ -1.05
HERC1-202ENST00000558324 MRPS12O15235 138 aaKnown RBP8.5□□□□□ -1.05
HERC1-202ENST00000558324 CRXO43186 299 aaPredicted RBP8.5□□□□□ -1.05
HERC1-202ENST00000558324 CAMLGP49069 296 aa8.5□□□□□ -1.05
HERC1-202ENST00000558324 RAB32Q13637 225 aa8.5□□□□□ -1.05
HERC1-202ENST00000558324 PSG3Q16557 428 aa8.5□□□□□ -1.05
HERC1-202ENST00000558324 C10orf113Q5VZT2 155 aa8.5□□□□□ -1.05
HERC1-202ENST00000558324 MIC13Q5XKP0 118 aa8.5□□□□□ -1.05
HERC1-202ENST00000558324 NRARPQ7Z6K4 114 aa8.5□□□□□ -1.05
HERC1-202ENST00000558324 OR8A1Q8NGG7 326 aa8.5□□□□□ -1.05
HERC1-202ENST00000558324 TMEM37Q8WXS4 190 aa8.5□□□□□ -1.05
HERC1-202ENST00000558324 RPUSD4Q96CM3 377 aaKnown RBP8.5□□□□□ -1.05
HERC1-202ENST00000558324 C11orf1Q9H5F2 150 aa8.5□□□□□ -1.05
HERC1-202ENST00000558324 UQCC1Q9NVA1 299 aa8.5□□□□□ -1.05
HERC1-202ENST00000558324 TEX48A0A1B0GUV7 120 aa8.49□□□□□ -1.05
HERC1-202ENST00000558324 SLC17A3O00476 420 aa8.49□□□□□ -1.05
HERC1-202ENST00000558324 BAXQ07812 192 aa8.49□□□□□ -1.05
HERC1-202ENST00000558324 ASAH1Q13510 395 aa8.49□□□□□ -1.05
HERC1-202ENST00000558324 RAB31Q13636 194 aa8.49□□□□□ -1.05
HERC1-202ENST00000558324 OPCMLQ14982 345 aa8.49□□□□□ -1.05
HERC1-202ENST00000558324 LCN15Q6UWW0 184 aa8.49□□□□□ -1.05
HERC1-202ENST00000558324 STX12Q86Y82 276 aa8.49□□□□□ -1.05
HERC1-202ENST00000558324 ENKURQ8TC29 256 aa8.49□□□□□ -1.05
HERC1-202ENST00000558324 S100ZQ8WXG8 99 aa8.49□□□□□ -1.05
HERC1-202ENST00000558324 RNF24Q9Y225 148 aa8.49□□□□□ -1.05
HERC1-202ENST00000558324 WDR83OSQ9Y284 106 aa8.49□□□□□ -1.05
HERC1-202ENST00000558324 TRAV5A0A0B4J249 113 aa8.48□□□□□ -1.05
HERC1-202ENST00000558324 HTN1P15515 57 aa8.48□□□□□ -1.05
HERC1-202ENST00000558324 SULT1A1P50225 295 aa8.48□□□□□ -1.05
HERC1-202ENST00000558324 DAD1P61803 113 aa8.48□□□□□ -1.05
HERC1-202ENST00000558324 Q6ZRG5 221 aa8.48□□□□□ -1.05
HERC1-202ENST00000558324 BPIFA4PQ86YQ2 179 aa8.48□□□□□ -1.05
HERC1-202ENST00000558324 TMEM252Q8N6L7 170 aa8.48□□□□□ -1.05
HERC1-202ENST00000558324 SLC50A1Q9BRV3 221 aa8.48□□□□□ -1.05
HERC1-202ENST00000558324 GPN1Q9HCN4 374 aaPredicted RBP8.48□□□□□ -1.05
HERC1-202ENST00000558324 ZNF331Q9NQX6 463 aaPredicted RBP8.48□□□□□ -1.05
HERC1-202ENST00000558324 LYRM2Q9NU23 88 aaPredicted RBP8.48□□□□□ -1.05
HERC1-202ENST00000558324 UPK1BO75841 260 aa8.47□□□□□ -1.05
HERC1-202ENST00000558324 SIX6O95475 246 aa8.47□□□□□ -1.05
HERC1-202ENST00000558324 P0DMU3 169 aa8.47□□□□□ -1.05
HERC1-202ENST00000558324 FAM231AP0DMU4 169 aa8.47□□□□□ -1.05
HERC1-202ENST00000558324 FAM231CP0DMU5 169 aa8.47□□□□□ -1.05
HERC1-202ENST00000558324 CXCL2P19875 107 aa8.47□□□□□ -1.05
HERC1-202ENST00000558324 FGF7P21781 194 aa8.47□□□□□ -1.05
HERC1-202ENST00000558324 LINC00299Q6ZSB3 139 aa8.47□□□□□ -1.05
HERC1-202ENST00000558324 UBE2DNLQ8IWF7 75 aa8.47□□□□□ -1.05
HERC1-202ENST00000558324 LINC01587Q99440 93 aa8.47□□□□□ -1.05
HERC1-202ENST00000558324 PARD6GQ9BYG4 376 aaPredicted RBP8.47□□□□□ -1.05
HERC1-202ENST00000558324 DNAJC4Q9NNZ3 241 aa8.47□□□□□ -1.05
HERC1-202ENST00000558324 DNAH6Q9C0G6 4158 aa8.47□□□□□ -1.05
HERC1-202ENST00000558324 PRAC2D3DTV9 90 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 H3BQ15 152 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 IGLC2P0DOY2 106 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 DEFB130BP0DP73 79 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 DEFB130AP0DP74 79 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 AZU1P20160 251 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 S100A11P31949 105 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 B2MP61769 119 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 HBG1P69891 147 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 HBG2P69892 147 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 IL15RAQ13261 267 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 VWC2Q2TAL6 325 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 LRRC37A5PQ49AS3 106 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 TMEM88Q6PEY1 159 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 POM121L12Q8N7R1 296 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 OR1L4Q8NGR5 311 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 SLC39A9Q9NUM3 307 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 PXMP4Q9Y6I8 212 aa8.46□□□□□ -1.06
HERC1-202ENST00000558324 J3KRW8 73 aa8.45□□□□□ -1.06
HERC1-202ENST00000558324 M0R2N4 97 aa8.45□□□□□ -1.06
HERC1-202ENST00000558324 CDKN1BP46527 198 aa8.45□□□□□ -1.06
HERC1-202ENST00000558324 IFITM3Q01628 133 aa8.45□□□□□ -1.06
HERC1-202ENST00000558324 KIR3DS1Q14943 382 aa8.45□□□□□ -1.06
HERC1-202ENST00000558324 OXA1LQ15070 435 aa8.45□□□□□ -1.06
HERC1-202ENST00000558324 FCN2Q15485 313 aa8.45□□□□□ -1.06
HERC1-202ENST00000558324 OR10J6PQ8NGY7 276 aa8.45□□□□□ -1.06
HERC1-202ENST00000558324 PFDN5Q99471 154 aa8.45□□□□□ -1.06
HERC1-202ENST00000558324 A6NHS1 94 aa8.44□□□□□ -1.06
HERC1-202ENST00000558324 RPL29P47914 159 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms