RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 RAB31Q13636 194 aa7.51□□□□□ -1.21
SNX6-208ENST00000556712 GCSAMLQ5JQS6 135 aa7.51□□□□□ -1.21
SNX6-208ENST00000556712 EBLN2Q6P2I7 272 aa7.51□□□□□ -1.21
SNX6-208ENST00000556712 ZNF738Q8NE65 137 aa7.51□□□□□ -1.21
SNX6-208ENST00000556712 NPCDR1Q9BY65 106 aa7.51□□□□□ -1.21
SNX6-208ENST00000556712 SLC39A9Q9NUM3 307 aa7.51□□□□□ -1.21
SNX6-208ENST00000556712 MBD2Q9UBB5 411 aa7.51□□□□□ -1.21
SNX6-208ENST00000556712 PXMP4Q9Y6I8 212 aa7.51□□□□□ -1.21
SNX6-208ENST00000556712 PLECQ15149 4684 aaKnown RBP7.51□□□□□ -1.21
SNX6-208ENST00000556712 IGHV3OR16-12A0A075B7B8 117 aa7.5□□□□□ -1.21
SNX6-208ENST00000556712 ELOA3CA0A087WX78 387 aaPredicted RBP7.5□□□□□ -1.21
SNX6-208ENST00000556712 MPC2O95563 127 aa7.5□□□□□ -1.21
SNX6-208ENST00000556712 MIFP14174 115 aa7.5□□□□□ -1.21
SNX6-208ENST00000556712 CXCL3P19876 107 aa7.5□□□□□ -1.21
SNX6-208ENST00000556712 RPL29P47914 159 aaKnown RBP7.5□□□□□ -1.21
SNX6-208ENST00000556712 CNN1P51911 297 aaKnown RBP7.5□□□□□ -1.21
SNX6-208ENST00000556712 ATP6V1FQ16864 119 aa7.5□□□□□ -1.21
SNX6-208ENST00000556712 Q6ZRG5 221 aa7.5□□□□□ -1.21
SNX6-208ENST00000556712 C11orf45Q8TAV5 145 aa7.5□□□□□ -1.21
SNX6-208ENST00000556712 LRRC20Q8TCA0 184 aa7.5□□□□□ -1.21
SNX6-208ENST00000556712 RNF126Q9BV68 326 aa7.5□□□□□ -1.21
SNX6-208ENST00000556712 C1QTNF4Q9BXJ3 329 aa7.5□□□□□ -1.21
SNX6-208ENST00000556712 SMIM3Q9BZL3 60 aa7.5□□□□□ -1.21
SNX6-208ENST00000556712 MFFQ9GZY8 342 aa7.5□□□□□ -1.21
SNX6-208ENST00000556712 SLC25A31Q9H0C2 315 aa7.5□□□□□ -1.21
SNX6-208ENST00000556712 DNAH1Q9P2D7 4330 aa7.5□□□□□ -1.21
SNX6-208ENST00000556712 NUPR2A6NF83 97 aa7.49□□□□□ -1.21
SNX6-208ENST00000556712 H3BQ15 152 aa7.49□□□□□ -1.21
SNX6-208ENST00000556712 IGLC2P0DOY2 106 aa7.49□□□□□ -1.21
SNX6-208ENST00000556712 PSG9Q00887 426 aa7.49□□□□□ -1.21
SNX6-208ENST00000556712 HIST1H1AQ02539 215 aaPredicted RBP7.49□□□□□ -1.21
SNX6-208ENST00000556712 PSG3Q16557 428 aa7.49□□□□□ -1.21
SNX6-208ENST00000556712 SPINK13Q1W4C9 94 aa7.49□□□□□ -1.21
SNX6-208ENST00000556712 SPATA31B1PQ5VZV4 182 aa7.49□□□□□ -1.21
SNX6-208ENST00000556712 CEMP1Q6PRD7 247 aaPredicted RBP7.49□□□□□ -1.21
SNX6-208ENST00000556712 LCN15Q6UWW0 184 aa7.49□□□□□ -1.21
SNX6-208ENST00000556712 AMTNQ6UX39 209 aa7.49□□□□□ -1.21
SNX6-208ENST00000556712 S100A7AQ86SG5 101 aa7.49□□□□□ -1.21
SNX6-208ENST00000556712 BPIFA4PQ86YQ2 179 aa7.49□□□□□ -1.21
SNX6-208ENST00000556712 OR1L4Q8NGR5 311 aa7.49□□□□□ -1.21
SNX6-208ENST00000556712 PHLDA1Q8WV24 401 aaPredicted RBP7.49□□□□□ -1.21
SNX6-208ENST00000556712 DNAJC4Q9NNZ3 241 aa7.49□□□□□ -1.21
SNX6-208ENST00000556712 CELA1Q9UNI1 258 aa7.49□□□□□ -1.21
SNX6-208ENST00000556712 HSPB11Q9Y547 144 aa7.49□□□□□ -1.21
SNX6-208ENST00000556712 HYDINQ4G0P3 5121 aa7.49□□□□□ -1.21
SNX6-208ENST00000556712 A8MTW9 85 aa7.48□□□□□ -1.21
SNX6-208ENST00000556712 ZNF705FA8MVS1 300 aaPredicted RBP7.48□□□□□ -1.21
SNX6-208ENST00000556712 M0R2Z0 102 aa7.48□□□□□ -1.21
SNX6-208ENST00000556712 PET100P0DJ07 73 aa7.48□□□□□ -1.21
SNX6-208ENST00000556712 FCN2Q15485 313 aa7.48□□□□□ -1.21
SNX6-208ENST00000556712 ZNF705AQ6ZN79 300 aaPredicted RBP7.48□□□□□ -1.21
SNX6-208ENST00000556712 ZNF767PQ75MW2 155 aa7.48□□□□□ -1.21
SNX6-208ENST00000556712 C1orf158Q8N1D5 194 aa7.48□□□□□ -1.21
SNX6-208ENST00000556712 OR11H7Q8NGC8 314 aa7.48□□□□□ -1.21
SNX6-208ENST00000556712 CLUHP3Q96NS8 147 aa7.48□□□□□ -1.21
SNX6-208ENST00000556712 PFDN5Q99471 154 aa7.48□□□□□ -1.21
SNX6-208ENST00000556712 ATP5SQ99766 215 aa7.48□□□□□ -1.21
SNX6-208ENST00000556712 WDR61Q9GZS3 305 aaKnown RBP7.48□□□□□ -1.21
SNX6-208ENST00000556712 ZNF331Q9NQX6 463 aaPredicted RBP7.48□□□□□ -1.21
SNX6-208ENST00000556712 PRAC2D3DTV9 90 aa7.47□□□□□ -1.21
SNX6-208ENST00000556712 MPDU1O75352 247 aa7.47□□□□□ -1.21
SNX6-208ENST00000556712 JTBO76095 146 aa7.47□□□□□ -1.21
SNX6-208ENST00000556712 PYYP10082 97 aa7.47□□□□□ -1.21
SNX6-208ENST00000556712 CXCL2P19875 107 aa7.47□□□□□ -1.21
SNX6-208ENST00000556712 RPL12P30050 165 aaKnown RBP7.47□□□□□ -1.21
SNX6-208ENST00000556712 BAP18Q8IXM2 172 aa7.47□□□□□ -1.21
SNX6-208ENST00000556712 OR8A1Q8NGG7 326 aa7.47□□□□□ -1.21
SNX6-208ENST00000556712 CHAC2Q8WUX2 184 aa7.47□□□□□ -1.21
SNX6-208ENST00000556712 RPUSD4Q96CM3 377 aaKnown RBP7.47□□□□□ -1.21
SNX6-208ENST00000556712 SLC50A1Q9BRV3 221 aa7.47□□□□□ -1.21
SNX6-208ENST00000556712 ZNF586Q9NXT0 402 aa7.47□□□□□ -1.21
SNX6-208ENST00000556712 RNF24Q9Y225 148 aa7.47□□□□□ -1.21
SNX6-208ENST00000556712 RFNGQ9Y644 331 aa7.47□□□□□ -1.21
SNX6-208ENST00000556712 TRAV12-2A0A075B6T6 113 aa7.46□□□□□ -1.22
SNX6-208ENST00000556712 CRXO43186 299 aaPredicted RBP7.46□□□□□ -1.22
SNX6-208ENST00000556712 DUSP14O95147 198 aaKnown RBP7.46□□□□□ -1.22
SNX6-208ENST00000556712 EMP1P54849 157 aa7.46□□□□□ -1.22
SNX6-208ENST00000556712 RHOBP62745 196 aa7.46□□□□□ -1.22
SNX6-208ENST00000556712 Q6ZTC4 211 aa7.46□□□□□ -1.22
SNX6-208ENST00000556712 MIR17HGQ75NE6 70 aa7.46□□□□□ -1.22
SNX6-208ENST00000556712 SAT2Q96F10 170 aaPredicted RBP7.46□□□□□ -1.22
SNX6-208ENST00000556712 SLC25A2Q9BXI2 301 aa7.46□□□□□ -1.22
SNX6-208ENST00000556712 PARD6GQ9BYG4 376 aaPredicted RBP7.46□□□□□ -1.22
SNX6-208ENST00000556712 MED28Q9H204 178 aa7.46□□□□□ -1.22
SNX6-208ENST00000556712 HRH4Q9H3N8 390 aa7.46□□□□□ -1.22
SNX6-208ENST00000556712 WFDC1Q9HC57 220 aa7.46□□□□□ -1.22
SNX6-208ENST00000556712 GOLT1BQ9Y3E0 138 aa7.46□□□□□ -1.22
SNX6-208ENST00000556712 BOLA2-SMG1P6H3BVE0 249 aa7.45□□□□□ -1.22
SNX6-208ENST00000556712 EIF3GO75821 320 aaKnown RBP eCLIP7.45□□□□□ -1.22
SNX6-208ENST00000556712 INSP01308 110 aa7.45□□□□□ -1.22
SNX6-208ENST00000556712 PRM2P04554 102 aa7.45□□□□□ -1.22
SNX6-208ENST00000556712 BLNKQ8WV28 456 aa7.45□□□□□ -1.22
SNX6-208ENST00000556712 LINC00476Q8WZB0 136 aa7.45□□□□□ -1.22
SNX6-208ENST00000556712 FAM167A-AS1Q96KT0 104 aa7.45□□□□□ -1.22
SNX6-208ENST00000556712 IGF2BP2-AS1Q96M15 143 aa7.45□□□□□ -1.22
SNX6-208ENST00000556712 NEU1Q99519 415 aa7.45□□□□□ -1.22
SNX6-208ENST00000556712 KLK5Q9Y337 293 aaPredicted RBP7.45□□□□□ -1.22
SNX6-208ENST00000556712 TRBV19A0A075B6N1 114 aa7.44□□□□□ -1.22
SNX6-208ENST00000556712 LOC102723971A0A1B0GUV8 181 aa7.44□□□□□ -1.22
SNX6-208ENST00000556712 C17orf112F2Z3M2 114 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms