RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 GCSAMLQ5JQS6 135 aa9.88□□□□□ -0.83
SNX6-203ENST00000555416 CHAC2Q8WUX2 184 aa9.88□□□□□ -0.83
SNX6-203ENST00000555416 CLUHP3Q96NS8 147 aa9.88□□□□□ -0.83
SNX6-203ENST00000555416 DNAJC4Q9NNZ3 241 aa9.88□□□□□ -0.83
SNX6-203ENST00000555416 RPRMQ9NS64 109 aa9.88□□□□□ -0.83
SNX6-203ENST00000555416 SLC39A9Q9NUM3 307 aa9.88□□□□□ -0.83
SNX6-203ENST00000555416 PXMP4Q9Y6I8 212 aa9.88□□□□□ -0.83
SNX6-203ENST00000555416 H3BQ15 152 aa9.87□□□□□ -0.83
SNX6-203ENST00000555416 PTTG1O95997 202 aa9.87□□□□□ -0.83
SNX6-203ENST00000555416 S100A7P31151 101 aa9.87□□□□□ -0.83
SNX6-203ENST00000555416 B2MP61769 119 aa9.87□□□□□ -0.83
SNX6-203ENST00000555416 RAB31Q13636 194 aa9.87□□□□□ -0.83
SNX6-203ENST00000555416 ATP6V1FQ16864 119 aa9.87□□□□□ -0.83
SNX6-203ENST00000555416 EBLN2Q6P2I7 272 aa9.87□□□□□ -0.83
SNX6-203ENST00000555416 NPCDR1Q9BY65 106 aa9.87□□□□□ -0.83
SNX6-203ENST00000555416 SLC25A31Q9H0C2 315 aa9.87□□□□□ -0.83
SNX6-203ENST00000555416 IGLC2P0DOY2 106 aa9.86□□□□□ -0.83
SNX6-203ENST00000555416 CNN1P51911 297 aaKnown RBP9.86□□□□□ -0.83
SNX6-203ENST00000555416 NUTF2P61970 127 aaKnown RBP9.86□□□□□ -0.83
SNX6-203ENST00000555416 PSG9Q00887 426 aa9.86□□□□□ -0.83
SNX6-203ENST00000555416 FCN2Q15485 313 aa9.86□□□□□ -0.83
SNX6-203ENST00000555416 SAMD13Q5VXD3 122 aa9.86□□□□□ -0.83
SNX6-203ENST00000555416 CEMP1Q6PRD7 247 aaPredicted RBP9.86□□□□□ -0.83
SNX6-203ENST00000555416 ZNF705AQ6ZN79 300 aaPredicted RBP9.86□□□□□ -0.83
SNX6-203ENST00000555416 C1orf158Q8N1D5 194 aa9.86□□□□□ -0.83
SNX6-203ENST00000555416 ZNF738Q8NE65 137 aa9.86□□□□□ -0.83
SNX6-203ENST00000555416 OR11H7Q8NGC8 314 aa9.86□□□□□ -0.83
SNX6-203ENST00000555416 C11orf45Q8TAV5 145 aa9.86□□□□□ -0.83
SNX6-203ENST00000555416 MBD2Q9UBB5 411 aa9.86□□□□□ -0.83
SNX6-203ENST00000555416 CELA1Q9UNI1 258 aa9.86□□□□□ -0.83
SNX6-203ENST00000555416 PLECQ15149 4684 aaKnown RBP9.85□□□□□ -0.83
SNX6-203ENST00000555416 ZNF705FA8MVS1 300 aaPredicted RBP9.85□□□□□ -0.83
SNX6-203ENST00000555416 MIFP14174 115 aa9.85□□□□□ -0.83
SNX6-203ENST00000555416 PSG3Q16557 428 aa9.85□□□□□ -0.83
SNX6-203ENST00000555416 SPATA31B1PQ5VZV4 182 aa9.85□□□□□ -0.83
SNX6-203ENST00000555416 Q6ZRG5 221 aa9.85□□□□□ -0.83
SNX6-203ENST00000555416 PHLDA1Q8WV24 401 aaPredicted RBP9.85□□□□□ -0.83
SNX6-203ENST00000555416 SAT2Q96F10 170 aaPredicted RBP9.85□□□□□ -0.83
SNX6-203ENST00000555416 C1QTNF4Q9BXJ3 329 aa9.85□□□□□ -0.83
SNX6-203ENST00000555416 MFFQ9GZY8 342 aa9.85□□□□□ -0.83
SNX6-203ENST00000555416 ZNF331Q9NQX6 463 aaPredicted RBP9.85□□□□□ -0.83
SNX6-203ENST00000555416 RFNGQ9Y644 331 aa9.85□□□□□ -0.83
SNX6-203ENST00000555416 IGHV3OR16-12A0A075B7B8 117 aa9.84□□□□□ -0.83
SNX6-203ENST00000555416 M0R2Z0 102 aa9.84□□□□□ -0.83
SNX6-203ENST00000555416 S100A7AQ86SG5 101 aa9.84□□□□□ -0.83
SNX6-203ENST00000555416 BPIFA4PQ86YQ2 179 aa9.84□□□□□ -0.83
SNX6-203ENST00000555416 OR1L4Q8NGR5 311 aa9.84□□□□□ -0.83
SNX6-203ENST00000555416 SMIM3Q9BZL3 60 aa9.84□□□□□ -0.83
SNX6-203ENST00000555416 WDR61Q9GZS3 305 aaKnown RBP9.84□□□□□ -0.83
SNX6-203ENST00000555416 WFDC1Q9HC57 220 aa9.84□□□□□ -0.83
SNX6-203ENST00000555416 ZNF586Q9NXT0 402 aa9.84□□□□□ -0.83
SNX6-203ENST00000555416 HSPB11Q9Y547 144 aa9.84□□□□□ -0.83
SNX6-203ENST00000555416 NUPR2A6NF83 97 aa9.83□□□□□ -0.84
SNX6-203ENST00000555416 PRAC2D3DTV9 90 aa9.83□□□□□ -0.84
SNX6-203ENST00000555416 CRXO43186 299 aaPredicted RBP9.83□□□□□ -0.84
SNX6-203ENST00000555416 MPDU1O75352 247 aa9.83□□□□□ -0.84
SNX6-203ENST00000555416 PRM2P04554 102 aa9.83□□□□□ -0.84
SNX6-203ENST00000555416 RPL12P30050 165 aaKnown RBP9.83□□□□□ -0.84
SNX6-203ENST00000555416 HIST1H1AQ02539 215 aaPredicted RBP9.83□□□□□ -0.84
SNX6-203ENST00000555416 SPINK13Q1W4C9 94 aa9.83□□□□□ -0.84
SNX6-203ENST00000555416 Q5BKY6 102 aa9.83□□□□□ -0.84
SNX6-203ENST00000555416 LCN15Q6UWW0 184 aa9.83□□□□□ -0.84
SNX6-203ENST00000555416 ZNF767PQ75MW2 155 aa9.83□□□□□ -0.84
SNX6-203ENST00000555416 OR8A1Q8NGG7 326 aa9.83□□□□□ -0.84
SNX6-203ENST00000555416 LRRC20Q8TCA0 184 aa9.83□□□□□ -0.84
SNX6-203ENST00000555416 RPUSD4Q96CM3 377 aaKnown RBP9.83□□□□□ -0.84
SNX6-203ENST00000555416 PFDN5Q99471 154 aa9.83□□□□□ -0.84
SNX6-203ENST00000555416 HRH4Q9H3N8 390 aa9.83□□□□□ -0.84
SNX6-203ENST00000555416 PYYP10082 97 aa9.82□□□□□ -0.84
SNX6-203ENST00000555416 CXCL2P19875 107 aa9.82□□□□□ -0.84
SNX6-203ENST00000555416 MIR17HGQ75NE6 70 aa9.82□□□□□ -0.84
SNX6-203ENST00000555416 BAP18Q8IXM2 172 aa9.82□□□□□ -0.84
SNX6-203ENST00000555416 FAM167A-AS1Q96KT0 104 aa9.82□□□□□ -0.84
SNX6-203ENST00000555416 ATP5SQ99766 215 aa9.82□□□□□ -0.84
SNX6-203ENST00000555416 SLC25A2Q9BXI2 301 aa9.82□□□□□ -0.84
SNX6-203ENST00000555416 HYDINQ4G0P3 5121 aa9.82□□□□□ -0.84
SNX6-203ENST00000555416 DUSP14O95147 198 aaKnown RBP9.81□□□□□ -0.84
SNX6-203ENST00000555416 NDUFB4O95168 129 aa9.81□□□□□ -0.84
SNX6-203ENST00000555416 KIR3DS1Q14943 382 aa9.81□□□□□ -0.84
SNX6-203ENST00000555416 IGF2BP2-AS1Q96M15 143 aa9.81□□□□□ -0.84
SNX6-203ENST00000555416 NEU1Q99519 415 aa9.81□□□□□ -0.84
SNX6-203ENST00000555416 PARD6GQ9BYG4 376 aaPredicted RBP9.81□□□□□ -0.84
SNX6-203ENST00000555416 MED28Q9H204 178 aa9.81□□□□□ -0.84
SNX6-203ENST00000555416 RNF24Q9Y225 148 aa9.81□□□□□ -0.84
SNX6-203ENST00000555416 ALMS1Q8TCU4 4167 aa9.81□□□□□ -0.84
SNX6-203ENST00000555416 DNAH1Q9P2D7 4330 aa9.8□□□□□ -0.84
SNX6-203ENST00000555416 TRBV19A0A075B6N1 114 aa9.8□□□□□ -0.84
SNX6-203ENST00000555416 TRAV12-2A0A075B6T6 113 aa9.8□□□□□ -0.84
SNX6-203ENST00000555416 BOLA2-SMG1P6H3BVE0 249 aa9.8□□□□□ -0.84
SNX6-203ENST00000555416 EIF3GO75821 320 aaKnown RBP eCLIP9.8□□□□□ -0.84
SNX6-203ENST00000555416 PET100P0DJ07 73 aa9.8□□□□□ -0.84
SNX6-203ENST00000555416 EMP1P54849 157 aa9.8□□□□□ -0.84
SNX6-203ENST00000555416 C12orf74Q32Q52 190 aa9.8□□□□□ -0.84
SNX6-203ENST00000555416 Q6ZTC4 211 aa9.8□□□□□ -0.84
SNX6-203ENST00000555416 SLC50A1Q9BRV3 221 aa9.8□□□□□ -0.84
SNX6-203ENST00000555416 TMEM14CQ9P0S9 112 aa9.8□□□□□ -0.84
SNX6-203ENST00000555416 M0R3E3 92 aa9.79□□□□□ -0.84
SNX6-203ENST00000555416 JTBO76095 146 aa9.79□□□□□ -0.84
SNX6-203ENST00000555416 RHOBP62745 196 aa9.79□□□□□ -0.84
SNX6-203ENST00000555416 LINC00476Q8WZB0 136 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms